BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fbpv0882 (479 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0) 84 5e-17 SB_50386| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-09) 76 2e-14 SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) 64 4e-11 SB_7329| Best HMM Match : GTP_EFTU (HMM E-Value=0) 33 0.092 SB_50050| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.65 SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34) 30 0.86 SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 30 1.1 SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0) 29 2.6 >SB_51711| Best HMM Match : GTP_EFTU_D3 (HMM E-Value=0) Length = 322 Score = 84.2 bits (199), Expect = 5e-17 Identities = 37/39 (94%), Positives = 38/39 (97%) Frame = +1 Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ 201 GITIDIALWKFET KYYVT+IDAPGHRDFIKNMITGTSQ Sbjct: 22 GITIDIALWKFETLKYYVTVIDAPGHRDFIKNMITGTSQ 60 Score = 41.9 bits (94), Expect = 3e-04 Identities = 18/19 (94%), Positives = 18/19 (94%) Frame = +2 Query: 23 MGKXSFKYAWVLDKLKAER 79 MGK SFKYAWVLDKLKAER Sbjct: 1 MGKGSFKYAWVLDKLKAER 19 >SB_50386| Best HMM Match : GTP_EFTU (HMM E-Value=1.6e-09) Length = 123 Score = 75.8 bits (178), Expect = 2e-14 Identities = 32/54 (59%), Positives = 43/54 (79%) Frame = +1 Query: 94 IDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAG 255 +D+ L +F+T +T++DAPGH+DFI NMITG +QAD A+L+V A TGEFEAG Sbjct: 1 MDVGLTRFQTKNKVITLMDAPGHKDFIPNMITGAAQADVAILVVDAITGEFEAG 54 Score = 40.3 bits (90), Expect = 8e-04 Identities = 18/26 (69%), Positives = 21/26 (80%) Frame = +3 Query: 267 GQTREHALLAFTLGVKQLIVGXNKMD 344 GQTREHA+L +LGV QLIV NK+D Sbjct: 59 GQTREHAILVRSLGVTQLIVAINKLD 84 >SB_8918| Best HMM Match : GTP_EFTU (HMM E-Value=1.09301e-43) Length = 547 Score = 64.5 bits (150), Expect = 4e-11 Identities = 26/57 (45%), Positives = 39/57 (68%) Frame = +1 Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAG 255 G T+++ F+T + T++DAPGH+ F+ NMI+G +QAD VL++ A GEFE G Sbjct: 207 GNTVEVGRAAFDTDTKHFTLLDAPGHKSFVPNMISGATQADLGVLVISARKGEFETG 263 Score = 62.1 bits (144), Expect = 2e-10 Identities = 27/57 (47%), Positives = 39/57 (68%) Frame = +3 Query: 261 KNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSXPRFEXIKKEVXSYIKKIGXNP 431 + GQTREHA+LA T GVK L++ NKMD ++ R+E IK ++ ++KK+G NP Sbjct: 266 RGGQTREHAMLAKTAGVKHLVILVNKMDDPTVKWNEERYEEIKVKLTPFLKKVGFNP 322 >SB_7329| Best HMM Match : GTP_EFTU (HMM E-Value=0) Length = 359 Score = 33.5 bits (73), Expect = 0.092 Identities = 12/52 (23%), Positives = 26/52 (50%) Frame = +1 Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240 GI++ ++ F + I+D PGH+DF ++ + D ++++ G Sbjct: 64 GISVATSVLAFNYRDKKINILDTPGHKDFAEDTFRTLTAVDSVIVVIDVAKG 115 >SB_50050| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 545 Score = 30.7 bits (66), Expect = 0.65 Identities = 14/35 (40%), Positives = 17/35 (48%) Frame = +1 Query: 136 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240 +T ID PGH F G + D VL+V A G Sbjct: 78 ITFIDTPGHAAFNSMRARGANVTDIVVLVVAADDG 112 >SB_3698| Best HMM Match : GTP_EFTU (HMM E-Value=9.3e-34) Length = 240 Score = 30.3 bits (65), Expect = 0.86 Identities = 13/49 (26%), Positives = 20/49 (40%) Frame = +1 Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXA 231 GIT I + + + +D PGH F G D +++V A Sbjct: 123 GITQHIGAYSVKVGDQKIAFLDTPGHEAFTAMRARGAQVTDLVIIVVAA 171 >SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) Length = 783 Score = 29.9 bits (64), Expect = 1.1 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +1 Query: 142 IIDAPGHRDFIKNMITGTSQADCAVLIV 225 IID PGH F G+S D A+L+V Sbjct: 682 IIDTPGHESFSNLRSRGSSLCDMAILVV 709 >SB_44740| Best HMM Match : GTP_EFTU (HMM E-Value=0) Length = 833 Score = 28.7 bits (61), Expect = 2.6 Identities = 11/37 (29%), Positives = 20/37 (54%) Frame = +1 Query: 130 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240 + + +ID+PGH DF + D A+++V +G Sbjct: 99 FLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 135 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,114,861 Number of Sequences: 59808 Number of extensions: 221294 Number of successful extensions: 471 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 440 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 471 length of database: 16,821,457 effective HSP length: 77 effective length of database: 12,216,241 effective search space used: 1001731762 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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