Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0882
(479 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 109 7e-25
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 109 7e-25
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 109 7e-25
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 109 7e-25
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 71 4e-13
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 65 2e-11
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 57 7e-09
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 55 3e-08
At1g06220.2 68414.m00656 elongation factor Tu family protein sim... 35 0.025
At1g06220.1 68414.m00655 elongation factor Tu family protein sim... 35 0.025
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 33 0.075
At3g22980.1 68416.m02898 elongation factor Tu family protein sim... 33 0.075
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 33 0.13
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 32 0.17
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 32 0.17
At4g11160.1 68417.m01808 translation initiation factor IF-2, mit... 31 0.53
At4g18330.2 68417.m02719 eukaryotic translation initiation facto... 30 0.70
At4g18330.1 68417.m02718 eukaryotic translation initiation facto... 30 0.70
At2g18720.1 68415.m02180 eukaryotic translation initiation facto... 30 0.93
At1g76825.1 68414.m08940 eukaryotic translation initiation facto... 30 0.93
At1g76810.1 68414.m08938 eukaryotic translation initiation facto... 30 0.93
At1g76720.1 68414.m08929 eukaryotic translation initiation facto... 30 0.93
At1g04170.1 68414.m00407 eukaryotic translation initiation facto... 30 0.93
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 29 1.2
At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2, p... 29 1.2
At1g21160.1 68414.m02646 eukaryotic translation initiation facto... 29 1.2
At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha s... 28 3.7
At1g78860.1 68414.m09192 curculin-like (mannose-binding) lectin ... 27 5.0
At1g78850.1 68414.m09191 curculin-like (mannose-binding) lectin ... 27 5.0
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 109 bits (263), Expect = 7e-25
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAG 255
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAG
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAG 126
Score = 90.2 bits (214), Expect = 6e-19
Identities = 42/64 (65%), Positives = 50/64 (78%)
Frame = +3
Query: 255 ISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSXPRFEXIKKEVXSYIKKIGXNPA 434
ISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS R++ I KEV SY+KK+G NP
Sbjct: 127 ISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPD 186
Query: 435 AVAF 446
+ F
Sbjct: 187 KIPF 190
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +2
Query: 5 EKEAQEMGKXSFKYAWVLDKLKAER 79
EKEA EM K SFKYAWVLDKLKAER
Sbjct: 43 EKEAAEMNKRSFKYAWVLDKLKAER 67
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 109 bits (263), Expect = 7e-25
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAG 255
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAG
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAG 126
Score = 90.2 bits (214), Expect = 6e-19
Identities = 42/64 (65%), Positives = 50/64 (78%)
Frame = +3
Query: 255 ISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSXPRFEXIKKEVXSYIKKIGXNPA 434
ISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS R++ I KEV SY+KK+G NP
Sbjct: 127 ISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPD 186
Query: 435 AVAF 446
+ F
Sbjct: 187 KIPF 190
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +2
Query: 5 EKEAQEMGKXSFKYAWVLDKLKAER 79
EKEA EM K SFKYAWVLDKLKAER
Sbjct: 43 EKEAAEMNKRSFKYAWVLDKLKAER 67
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 109 bits (263), Expect = 7e-25
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAG 255
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAG
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAG 126
Score = 90.2 bits (214), Expect = 6e-19
Identities = 42/64 (65%), Positives = 50/64 (78%)
Frame = +3
Query: 255 ISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSXPRFEXIKKEVXSYIKKIGXNPA 434
ISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS R++ I KEV SY+KK+G NP
Sbjct: 127 ISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPD 186
Query: 435 AVAF 446
+ F
Sbjct: 187 KIPF 190
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +2
Query: 5 EKEAQEMGKXSFKYAWVLDKLKAER 79
EKEA EM K SFKYAWVLDKLKAER
Sbjct: 43 EKEAAEMNKRSFKYAWVLDKLKAER 67
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 109 bits (263), Expect = 7e-25
Identities = 49/57 (85%), Positives = 53/57 (92%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAG 255
GITIDIALWKFET+KYY T+IDAPGHRDFIKNMITGTSQADCAVLI+ + TG FEAG
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAG 126
Score = 90.2 bits (214), Expect = 6e-19
Identities = 42/64 (65%), Positives = 50/64 (78%)
Frame = +3
Query: 255 ISKNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSXPRFEXIKKEVXSYIKKIGXNPA 434
ISK+GQTREHALLAFTLGVKQ+I NKMD+T P YS R++ I KEV SY+KK+G NP
Sbjct: 127 ISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPD 186
Query: 435 AVAF 446
+ F
Sbjct: 187 KIPF 190
Score = 48.8 bits (111), Expect = 2e-06
Identities = 22/25 (88%), Positives = 22/25 (88%)
Frame = +2
Query: 5 EKEAQEMGKXSFKYAWVLDKLKAER 79
EKEA EM K SFKYAWVLDKLKAER
Sbjct: 43 EKEAAEMNKRSFKYAWVLDKLKAER 67
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 70.9 bits (166), Expect = 4e-13
Identities = 27/57 (47%), Positives = 43/57 (75%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAG 255
GIT+ +A+ F + +++V ++D+PGH+DF+ NMI G +QAD A+L++ A G FEAG
Sbjct: 302 GITMTVAVAYFNSKRHHVVLLDSPGHKDFVPNMIAGATQADAAILVIDASVGAFEAG 358
Score = 46.0 bits (104), Expect = 1e-05
Identities = 24/49 (48%), Positives = 32/49 (65%)
Frame = +3
Query: 267 GQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSXPRFEXIKKEVXSYIK 413
GQTREHA + GV+Q+IV NKMD YS RF+ IK+ V S+++
Sbjct: 364 GQTREHARVLRGFGVEQVIVAINKMDIV--GYSKERFDLIKQHVGSFLQ 410
Score = 34.3 bits (75), Expect = 0.043
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 5 EKEAQEMGKXSFKYAWVLDKLKAER 79
EKEA+ GK SF YAW LD+ ER
Sbjct: 275 EKEAKLQGKGSFAYAWALDESAEER 299
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 65.3 bits (152), Expect = 2e-11
Identities = 28/57 (49%), Positives = 38/57 (66%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEAG 255
G T+++ FET TI+DAPGH+ ++ NMI+G SQAD VL++ A GEFE G
Sbjct: 164 GKTVEVGRAHFETESTRFTILDAPGHKSYVPNMISGASQADIGVLVISARKGEFETG 220
Score = 52.4 bits (120), Expect = 2e-07
Identities = 25/56 (44%), Positives = 36/56 (64%)
Frame = +3
Query: 261 KNGQTREHALLAFTLGVKQLIVGXNKMDSTEPPYSXPRFEXIKKEVXSYIKKIGXN 428
+ GQTREH LA TLGV +LIV NKMD +S R++ I++++ ++K G N
Sbjct: 223 RGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVNWSKERYDEIEQKMVPFLKASGYN 278
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 56.8 bits (131), Expect = 7e-09
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
GITI+ A ++ET + +D PGH D++KNMITG +Q D A+L+V G
Sbjct: 127 GITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADG 178
Score = 29.9 bits (64), Expect = 0.93
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = +3
Query: 270 QTREHALLAFTLGVKQLIVGXNKMDSTE 353
QT+EH LLA +GV ++V NK D +
Sbjct: 182 QTKEHILLAKQVGVPDMVVFLNKEDQVD 209
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 54.8 bits (126), Expect = 3e-08
Identities = 24/52 (46%), Positives = 34/52 (65%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
GITI A ++ET+K + +D PGH D++KNMITG +Q D +L+V G
Sbjct: 115 GITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDG 166
Score = 34.7 bits (76), Expect = 0.033
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3
Query: 270 QTREHALLAFTLGVKQLIVGXNKMDSTEPPYSXPRFEXIKKEVXSYIK 413
QT+EH LLA +GV L+ NK+D + P E +E+ S+ K
Sbjct: 170 QTKEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYK 217
>At1g06220.2 68414.m00656 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.1 bits (77), Expect = 0.025
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 88 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At1g06220.1 68414.m00655 elongation factor Tu family protein
similar to Cryptosporidium parvum elongation factor-2
GB:U21667 GI:706974 from [Cryptosporidium parvum]
Length = 987
Score = 35.1 bits (77), Expect = 0.025
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +1
Query: 88 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
+ + + L + Y I+D PGH +F M AD AVLIV A G
Sbjct: 195 VPMSLVLEDSRSKSYLCNIMDTPGHVNFSDEMTASLRLADGAVLIVDAAEG 245
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 33.5 bits (73), Expect = 0.075
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +1
Query: 118 ETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
E S Y + +ID PGH DF + S A+L+V A G
Sbjct: 131 EASGYLLNLIDTPGHVDFSYEVSRSLSACQGALLVVDAAQG 171
>At3g22980.1 68416.m02898 elongation factor Tu family protein
similar to eukaryotic translation elongation factor 2
GB:NP_001952 [Homo sapiens]
Length = 1015
Score = 33.5 bits (73), Expect = 0.075
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 88 ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
IT+ + + Y + +ID+PGH DF + T +D A+++V A G
Sbjct: 60 ITMKSSSISLKYKDYSLNLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEG 110
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 32.7 bits (71), Expect = 0.13
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 4/66 (6%)
Frame = +1
Query: 85 GITIDIAL----WKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTGEFEA 252
GITI + + +E + + + +ID PGH DF + + + A+L+V A G EA
Sbjct: 133 GITIKLQAARMRYVYEDTPFCLNLIDTPGHVDFSYEVSRSLAACEGALLVVDASQG-VEA 191
Query: 253 GSLRTV 270
+L V
Sbjct: 192 QTLANV 197
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 32.3 bits (70), Expect = 0.17
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
GITI A Y V IID PGH DF + D A+L++ + G
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGG 169
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 32.3 bits (70), Expect = 0.17
Identities = 19/52 (36%), Positives = 24/52 (46%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
GITI A Y V IID PGH DF + D A+L++ + G
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGG 169
>At4g11160.1 68417.m01808 translation initiation factor IF-2,
mitochondrial, putative similar to SP|P46198|IF2M_BOVIN
Translation initiation factor IF-2, mitochondrial
precursor (IF-2Mt) (IF-2(Mt)) {Bos taurus}
Length = 743
Score = 30.7 bits (66), Expect = 0.53
Identities = 13/35 (37%), Positives = 18/35 (51%)
Frame = +1
Query: 136 VTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
+T +D PGH F + G + D VL+V A G
Sbjct: 270 ITFLDTPGHAAFSEMRARGAAVTDIVVLVVAADDG 304
>At4g18330.2 68417.m02719 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 471
Score = 30.3 bits (65), Expect = 0.70
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 121 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXA 231
T + +V+ +D PGH + M+ G + D A+L++ A
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At4g18330.1 68417.m02718 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to SP|Q09130 Eukaryotic translation
initiation factor 2 gamma subunit (eIF-2- gamma)
{Schizosaccharomyces pombe}; contains Pfam profile
PF00009: Elongation factor Tu GTP binding domain;
isoform predicted to contain a TG non-consensus acceptor
splice site.
Length = 284
Score = 30.3 bits (65), Expect = 0.70
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = +1
Query: 121 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXA 231
T + +V+ +D PGH + M+ G + D A+L++ A
Sbjct: 124 TLRRHVSCVDCPGHDILMATMLNGAAIVDGALLLIAA 160
>At2g18720.1 68415.m02180 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative
Length = 465
Score = 29.9 bits (64), Expect = 0.93
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 133 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVXA 231
+V+ +D PGH + M+ G + D A+LI+ A
Sbjct: 120 HVSFVDCPGHDILMATMLNGAAIMDGALLIIAA 152
>At1g76825.1 68414.m08940 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profile PF00009: Elongation
factor Tu GTP binding domain
Length = 630
Score = 29.9 bits (64), Expect = 0.93
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 142 IIDAPGHRDFIKNMITGTSQADCAVLIV 225
+ID PGH F G+S D A+L+V
Sbjct: 113 VIDTPGHESFTNLRSRGSSLCDLAILVV 140
>At1g76810.1 68414.m08938 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to IF2
protein [Drosophila melanogaster] GI:7108770; contains
Pfam profile PF03144: Elongation factor Tu domain 2
Length = 1294
Score = 29.9 bits (64), Expect = 0.93
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 142 IIDAPGHRDFIKNMITGTSQADCAVLIV 225
+ID PGH F G+S D A+L+V
Sbjct: 772 VIDTPGHESFTNLRSRGSSLCDLAILVV 799
>At1g76720.1 68414.m08929 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1201
Score = 29.9 bits (64), Expect = 0.93
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 142 IIDAPGHRDFIKNMITGTSQADCAVLIV 225
+ID PGH F G+S D A+L+V
Sbjct: 705 VIDTPGHESFTNLRSRGSSLCDLAILVV 732
>At1g04170.1 68414.m00407 eukaryotic translation initiation factor 2
subunit 3, putative / eIF2S3, putative / eIF-2-gamma,
putative similar to gb|U37354 from S. pombe. ESTs
gb|T41979, gb|N37284 and gb|N37529 come from this gene
Length = 465
Score = 29.9 bits (64), Expect = 0.93
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
Frame = +1
Query: 115 FETSKY----YVTIIDAPGHRDFIKNMITGTSQADCAVLIVXA 231
FE SK +V+ +D PGH + M+ G + D A+L++ A
Sbjct: 112 FENSKMKLLRHVSFVDCPGHDILMATMLNGAAIMDGALLLIAA 154
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 29.5 bits (63), Expect = 1.2
Identities = 17/52 (32%), Positives = 23/52 (44%)
Frame = +1
Query: 85 GITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVXAGTG 240
GITI A K+ + IID PGH DF + D A+ + + G
Sbjct: 146 GITITSAATTTFWDKHRINIIDTPGHVDFTLEVERALRVLDGAICLFDSVAG 197
>At1g56070.1 68414.m06438 elongation factor 2, putative / EF-2,
putative similar to ELONGATION FACTOR 2 GB:O14460 from
[Schizosaccharomyces pombe]
Length = 843
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +1
Query: 124 SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 225
++Y + +ID+PGH DF + D A+++V
Sbjct: 96 NEYLINLIDSPGHVDFSSEVTAALRITDGALVVV 129
>At1g21160.1 68414.m02646 eukaryotic translation initiation factor 2
family protein / eIF-2 family protein similar to
SP|O60841 Translation initiation factor IF-2 {Homo
sapiens}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03144: Elongation factor
Tu domain 2
Length = 1088
Score = 29.5 bits (63), Expect = 1.2
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 136 VTIIDAPGHRDFIKNMITGTSQADCAVLIV 225
+ +ID PGH F G++ D A+L+V
Sbjct: 558 ILVIDTPGHESFTNLRSRGSNLCDLAILVV 587
>At2g28000.1 68415.m03393 RuBisCO subunit binding-protein alpha
subunit, chloroplast / 60 kDa chaperonin alpha subunit /
CPN-60 alpha identical to SWISS-PROT:P21238- RuBisCO
subunit binding-protein alpha subunit, chloroplast
precursor (60 kDa chaperonin alpha subunit, CPN-60
alpha) [Arabidopsis thaliana]
Length = 586
Score = 27.9 bits (59), Expect = 3.7
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = -3
Query: 225 YDEHSAISLRGSCDHVLDEISVSRSINDGNIVLASFELPESNIDCDTTSRSAFSLSN 55
+D+HS +L+ D + D + ++ N+VL F P+ D T +R A L N
Sbjct: 53 FDQHSRAALQAGIDKLADCVGLTLGPRGRNVVLDEFGSPKVVNDGVTIAR-AIELPN 108
>At1g78860.1 68414.m09192 curculin-like (mannose-binding) lectin
family protein low similarity to Ser/Thr protein kinase
[Zea mays] GI:2598067; contains Pfam profile PF01453:
Lectin (probable mannose binding)
Length = 443
Score = 27.5 bits (58), Expect = 5.0
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 41 KYAWVLDKLKAERXVVSQSILLSGSSKLASTMLPSL 148
K+ W + +V QS+ L+G +KL S + PS+
Sbjct: 152 KFVWQSFDSPTDTLLVGQSLKLNGQNKLVSRLSPSV 187
>At1g78850.1 68414.m09191 curculin-like (mannose-binding) lectin
family protein low similarity to ser/thr protein kinase
from Zea mays [GI:2598067]; contains Pfam lectin
(probable mannose binding) domain PF01453
Length = 441
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +2
Query: 35 SFKYAWVLDKLKAERXVVSQSILLSGSSKLASTMLPSL 148
S K+ W + +V QS+ L+G +KL S + PS+
Sbjct: 150 SGKFVWQSFDSPTDTLLVGQSLKLNGRTKLVSRLSPSV 187
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,291,632
Number of Sequences: 28952
Number of extensions: 159576
Number of successful extensions: 442
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 421
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 442
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 819227264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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