Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0879
(712 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 151 6e-37
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 151 6e-37
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 114 5e-26
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 112 3e-25
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 105 4e-23
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 96 3e-20
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 93 2e-19
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 93 2e-19
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 51 7e-07
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 51 7e-07
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 46 4e-05
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 46 4e-05
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 46 4e-05
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.15
Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical pr... 30 1.9
U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical p... 30 1.9
U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical p... 30 1.9
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 30 1.9
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 30 1.9
Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.5
Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.5
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 28 7.6
U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonin... 28 7.6
U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase ... 28 7.6
U11280-4|AAM97951.2| 353|Caenorhabditis elegans Protein kinase ... 28 7.6
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 28 7.6
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 151 bits (365), Expect = 6e-37
Identities = 72/88 (81%), Positives = 77/88 (87%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 421
F + +ITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKMDS
Sbjct: 98 FIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDS 157
Query: 422 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 505
TEPP+SE RF EI EVS +IKKIGYNP
Sbjct: 158 TEPPFSEARFTEITNEVSGFIKKIGYNP 185
Score = 112 bits (269), Expect = 3e-25
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE
Sbjct: 18 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 101 bits (243), Expect = 4e-22
Identities = 44/64 (68%), Positives = 52/64 (81%)
Frame = +1
Query: 502 PSSVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCXIEALDAILXPARPTXK 681
P +V FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK +EALD+I+ P RPT +
Sbjct: 185 PKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDR 244
Query: 682 PLRL 693
PLRL
Sbjct: 245 PLRL 248
Score = 71.7 bits (168), Expect = 5e-13
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITIDIALWKFET+KYY+TIIDAPGHRDFIKN
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKN 101
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 151 bits (365), Expect = 6e-37
Identities = 72/88 (81%), Positives = 77/88 (87%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 421
F + +ITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKMDS
Sbjct: 98 FIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDS 157
Query: 422 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 505
TEPP+SE RF EI EVS +IKKIGYNP
Sbjct: 158 TEPPFSEARFTEITNEVSGFIKKIGYNP 185
Score = 112 bits (269), Expect = 3e-25
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE
Sbjct: 18 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 101 bits (243), Expect = 4e-22
Identities = 44/64 (68%), Positives = 52/64 (81%)
Frame = +1
Query: 502 PSSVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCXIEALDAILXPARPTXK 681
P +V FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK +EALD+I+ P RPT +
Sbjct: 185 PKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDR 244
Query: 682 PLRL 693
PLRL
Sbjct: 245 PLRL 248
Score = 71.7 bits (168), Expect = 5e-13
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITIDIALWKFET+KYY+TIIDAPGHRDFIKN
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKN 101
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 114 bits (275), Expect = 5e-26
Identities = 74/151 (49%), Positives = 87/151 (57%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 421
F + +ITGTSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQL V+
Sbjct: 98 FIKNMITGTSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSP 154
Query: 422 TEPPYSEPRFEEIKKEVSSYIKKIGYNPALSLSCPFLDGTETTCWSLXPKCLGSRDGRWS 601
T P S R + I++ + + +P D TETTC C GSRDG +
Sbjct: 155 TRSPDSSRRSDTIQR-----LFHLSQSP---------DSTETTCLRSPRTCHGSRDGLLN 200
Query: 602 VKKAKLMENASLKLSMPSCXLLAPLISPCVF 694
+K L E S +L PS A L VF
Sbjct: 201 ARKETLPERPSSRLLTPSSHHNAQLTDHSVF 231
Score = 112 bits (269), Expect = 3e-25
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE
Sbjct: 18 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 71.7 bits (168), Expect = 5e-13
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITIDIALWKFET+KYY+TIIDAPGHRDFIKN
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKN 101
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 112 bits (269), Expect = 3e-25
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE
Sbjct: 18 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 101 bits (243), Expect = 4e-22
Identities = 44/64 (68%), Positives = 52/64 (81%)
Frame = +1
Query: 502 PSSVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCXIEALDAILXPARPTXK 681
P +V FVPISG++GDNMLE S+ MPWFKGW VERKEG A GK +EALD+I+ P RPT +
Sbjct: 151 PKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDR 210
Query: 682 PLRL 693
PLRL
Sbjct: 211 PLRL 214
Score = 71.7 bits (168), Expect = 5e-13
Identities = 30/32 (93%), Positives = 32/32 (100%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITIDIALWKFET+KYY+TIIDAPGHRDFIKN
Sbjct: 70 GITIDIALWKFETAKYYITIIDAPGHRDFIKN 101
Score = 64.1 bits (149), Expect(2) = 3e-15
Identities = 28/38 (73%), Positives = 31/38 (81%)
Frame = +2
Query: 392 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNP 505
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNP 151
Score = 35.1 bits (77), Expect(2) = 3e-15
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVA 301
F + +ITGTSQADCAVL+VA
Sbjct: 98 FIKNMITGTSQADCAVLVVA 117
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 105 bits (251), Expect = 4e-23
Identities = 47/50 (94%), Positives = 48/50 (96%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 153
SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLK +
Sbjct: 18 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKVTK 67
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 95.9 bits (228), Expect = 3e-20
Identities = 41/93 (44%), Positives = 64/93 (68%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 421
F +I G +QAD AVL+++A GEFE G + GQTREH++L T GVK L++ VNKMD
Sbjct: 200 FVPNMIVGANQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDD 259
Query: 422 TEPPYSEPRFEEIKKEVSSYIKKIGYNPALSLS 520
+ E RF+EI+ +++ +++K+G+NP ++
Sbjct: 260 PTVKWEEERFKEIEGKLTPFLRKLGFNPKTDIT 292
Score = 55.6 bits (128), Expect = 3e-08
Identities = 24/51 (47%), Positives = 36/51 (70%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D ERE
Sbjct: 120 AGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMDTNDEERE 170
Score = 39.5 bits (88), Expect = 0.002
Identities = 22/66 (33%), Positives = 34/66 (51%)
Frame = +3
Query: 57 QTYHREVREGGPGNG*RILQICLGIGQTKG*A*XGITIDIALWKFETSKYYVTIIDAPGH 236
+ Y RE +E G + L C+ + G T+++ FET K + TI+DAPGH
Sbjct: 142 EKYEREAKEKGRESW--YLSWCMDTNDEE--REKGKTVEVGRAYFETEKRHFTILDAPGH 197
Query: 237 RDFIKN 254
+ F+ N
Sbjct: 198 KSFVPN 203
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 421
F +ITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+
Sbjct: 261 FISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDT 320
Query: 422 TEPPYSEPRFEEIKKEVSSYIKK 490
+ +S+ RF+EIK +S ++ +
Sbjct: 321 VD--WSQDRFDEIKNNLSVFLTR 341
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERE
Sbjct: 181 AGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERE 231
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
G+T+DI FETS + ++DAPGH+DFI N
Sbjct: 233 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISN 264
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +1
Query: 505 SSVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCXIEALDAILXPARPTXKP 684
S FVP+SG+ G+N+++ ++ W+ DG C +E +D+ + P P+ P
Sbjct: 346 SKPKFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDGP 392
Query: 685 LRL 693
LR+
Sbjct: 393 LRI 395
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 93.1 bits (221), Expect = 2e-19
Identities = 45/83 (54%), Positives = 60/83 (72%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 421
F +ITGTSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+
Sbjct: 279 FISNMITGTSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDT 338
Query: 422 TEPPYSEPRFEEIKKEVSSYIKK 490
+ +S+ RF+EIK +S ++ +
Sbjct: 339 VD--WSQDRFDEIKNNLSVFLTR 359
Score = 63.3 bits (147), Expect = 2e-10
Identities = 28/51 (54%), Positives = 36/51 (70%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ + ERE
Sbjct: 199 AGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDETEEERE 249
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/32 (53%), Positives = 23/32 (71%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
G+T+DI FETS + ++DAPGH+DFI N
Sbjct: 251 GVTMDIGRTSFETSHRRIVLLDAPGHKDFISN 282
Score = 36.3 bits (80), Expect = 0.022
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +1
Query: 505 SSVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCXIEALDAILXPARPTXKP 684
S FVP+SG+ G+N+++ ++ W+ DG C +E +D+ + P P+ P
Sbjct: 364 SKPKFVPVSGFTGENLIK-RMELDWY------------DGPCLLELIDSFVAPQPPSDGP 410
Query: 685 LRL 693
LR+
Sbjct: 411 LRI 413
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 51.2 bits (117), Expect = 7e-07
Identities = 33/96 (34%), Positives = 48/96 (50%)
Frame = +2
Query: 215 HH*CSWTQRFHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 394
H C F + +I GTSQ D AVL++AA G E QT+EH +LA +GVK +
Sbjct: 112 HTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNM 164
Query: 395 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 502
+ +NK D E E + ++ E + G+N
Sbjct: 165 AIFINKADLVE----EDDLDLVEMEARELLSLHGFN 196
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITI++A +E+ + D PGH DFIKN
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKN 124
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 51.2 bits (117), Expect = 7e-07
Identities = 33/96 (34%), Positives = 48/96 (50%)
Frame = +2
Query: 215 HH*CSWTQRFHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 394
H C F + +I GTSQ D AVL++AA G E QT+EH +LA +GVK +
Sbjct: 112 HTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNM 164
Query: 395 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 502
+ +NK D E E + ++ E + G+N
Sbjct: 165 AIFINKADLVE----EDDLDLVEMEARELLSLHGFN 196
Score = 32.3 bits (70), Expect = 0.35
Identities = 15/32 (46%), Positives = 20/32 (62%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITI++A +E+ + D PGH DFIKN
Sbjct: 93 GITINVAHIGYESPLRRYSHTDCPGHSDFIKN 124
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 45.6 bits (103), Expect = 4e-05
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +2
Query: 215 HH*CSWTQRFHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--K 388
H C + + +ITG +Q + A+L+VAA G QTREH LLA +GV
Sbjct: 116 HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLD 168
Query: 389 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPALSLSCPFLDGT 541
++V +NK+D E P +E R E ++ ++ + + GY +CP + G+
Sbjct: 169 NIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGYP---GDTCPVIFGS 213
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITI+ ++ET+K + ID PGH D+IKN
Sbjct: 97 GITINAFHLEYETAKRHYAHIDCPGHADYIKN 128
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 45.6 bits (103), Expect = 4e-05
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +2
Query: 215 HH*CSWTQRFHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--K 388
H C + + +ITG +Q + A+L+VAA G QTREH LLA +GV
Sbjct: 117 HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLD 169
Query: 389 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPALSLSCPFLDGT 541
++V +NK+D E P +E R E ++ ++ + + GY +CP + G+
Sbjct: 170 NIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGYP---GDTCPVIFGS 214
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITI+ ++ET+K + ID PGH D+IKN
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIKN 129
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 45.6 bits (103), Expect = 4e-05
Identities = 36/111 (32%), Positives = 58/111 (52%), Gaps = 2/111 (1%)
Frame = +2
Query: 215 HH*CSWTQRFHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--K 388
H C + + +ITG +Q + A+L+VAA G QTREH LLA +GV
Sbjct: 117 HIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLD 169
Query: 389 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPALSLSCPFLDGT 541
++V +NK+D E P +E R E ++ ++ + + GY +CP + G+
Sbjct: 170 NIVVFMNKVD--EVPDAETR-ELVEMDIREQLNEFGYP---GDTCPVIFGS 214
Score = 37.1 bits (82), Expect = 0.012
Identities = 16/32 (50%), Positives = 22/32 (68%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITI+ ++ET+K + ID PGH D+IKN
Sbjct: 98 GITINAFHLEYETAKRHYAHIDCPGHADYIKN 129
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.15
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -2
Query: 411 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 283
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z29094-3|CAA82343.1| 358|Caenorhabditis elegans Hypothetical
protein C07A9.5 protein.
Length = 358
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 3/95 (3%)
Frame = +1
Query: 28 HLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYA-WVLDK--LKAEREXVSQSILLSGSSKL 198
H+IY G R + E E+ G+ S ++ W + + ER S L S +L
Sbjct: 38 HIIY---GEKCRLVGFLETESPSTGRFSTNHSTWTHSRPTVSGERFTHSFKTLASRMERL 94
Query: 199 ASTMLPSLMLLDTEISSRTDHRNLSG*LRCAHRSC 303
T+ + ++D EIS +D+ + C ++C
Sbjct: 95 DQTISDRIRIVDGEISRHSDNEKICEQAACTLKTC 129
>U88315-18|ABO16437.1| 99|Caenorhabditis elegans Hypothetical
protein C37H5.13c protein.
Length = 99
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 573 HFGXRLQHVVSVPSRNGHESDRAGL*PIFLMYEDTSFLISSNLGSLYGGSVESIL 409
HF R QHV S PSR+ D+ G+ ++ T ++S + G +++ L
Sbjct: 18 HFAHRPQHVSSAPSRSMEIDDQNGVQHYPMLLNVTHIDMTSRADDIRAGLIDTFL 72
>U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical
protein C37H5.13b protein.
Length = 132
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 573 HFGXRLQHVVSVPSRNGHESDRAGL*PIFLMYEDTSFLISSNLGSLYGGSVESIL 409
HF R QHV S PSR+ D+ G+ ++ T ++S + G +++ L
Sbjct: 51 HFAHRPQHVSSAPSRSMEIDDQNGVQHYPMLLNVTHIDMTSRADDIRAGLIDTFL 105
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/55 (29%), Positives = 27/55 (49%)
Frame = -2
Query: 573 HFGXRLQHVVSVPSRNGHESDRAGL*PIFLMYEDTSFLISSNLGSLYGGSVESIL 409
HF R QHV S PSR+ D+ G+ ++ T ++S + G +++ L
Sbjct: 51 HFAHRPQHVSSAPSRSMEIDDQNGVQHYPMLLNVTHIDMTSRADDIRAGLIDTFL 105
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN*SQEPLRLIALCSS*LPVPVNSKLVSLR 338
GIT+ Y + +ID PGH DF S E R +A+C L + ++ V +
Sbjct: 87 GITVKAQTAALRHRGYLLNLIDTPGHVDF----SAEVSRSLAVCDGILLLVAANQGVQAQ 142
Query: 339 TV 344
T+
Sbjct: 143 TI 144
>Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical
protein F54D5.5b protein.
Length = 492
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 55 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305
>Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical
protein F54D5.5a protein.
Length = 427
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 55 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
+KR ++ EKE + F Y LDK+K ER+
Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 27.9 bits (59), Expect = 7.6
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = +2
Query: 254 LITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 433
++ ++ D A++I+ + AGI QT EH LLA ++I+ +NK D E
Sbjct: 89 VLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE-- 139
Query: 434 YSEPRFEEIKKEVSSYIKKIG 496
+ + E K+V +K +G
Sbjct: 140 --KSKISESAKKVRKGLKSMG 158
>U32275-1|AAA75370.1| 982|Caenorhabditis elegans serine-threonine
kinase protein.
Length = 982
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 398 VGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPALSLSCPFLDGTETTCWSLXPKCL 577
V + KM+ + E ++ +I KEVS ++ + + + FL +TTCW + C+
Sbjct: 56 VAIKKMNFSGKQAVE-KWNDILKEVS-FLNTVVHPHIVDYKACFLK--DTTCWLVMEYCI 111
Query: 578 GS 583
GS
Sbjct: 112 GS 113
>U11280-5|AAA19437.1| 982|Caenorhabditis elegans Protein kinase
protein 18, isoforma protein.
Length = 982
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 398 VGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPALSLSCPFLDGTETTCWSLXPKCL 577
V + KM+ + E ++ +I KEVS ++ + + + FL +TTCW + C+
Sbjct: 56 VAIKKMNFSGKQAVE-KWNDILKEVS-FLNTVVHPHIVDYKACFLK--DTTCWLVMEYCI 111
Query: 578 GS 583
GS
Sbjct: 112 GS 113
>U11280-4|AAM97951.2| 353|Caenorhabditis elegans Protein kinase
protein 18, isoformb protein.
Length = 353
Score = 27.9 bits (59), Expect = 7.6
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = +2
Query: 398 VGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPALSLSCPFLDGTETTCWSLXPKCL 577
V + KM+ + E ++ +I KEVS ++ + + + FL +TTCW + C+
Sbjct: 56 VAIKKMNFSGKQAVE-KWNDILKEVS-FLNTVVHPHIVDYKACFLK--DTTCWLVMEYCI 111
Query: 578 GS 583
GS
Sbjct: 112 GS 113
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 27.9 bits (59), Expect = 7.6
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDF 245
GIT+ A + + + +ID PGH DF
Sbjct: 75 GITVQSAAVNLDWKGHRINLIDTPGHVDF 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,669,044
Number of Sequences: 27780
Number of extensions: 355805
Number of successful extensions: 1035
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1026
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1655655746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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