Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0879
(712 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 174 8e-46
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 174 8e-46
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 174 8e-46
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 165 4e-43
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 3.8
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 5.0
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 8.7
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 174 bits (423), Expect = 8e-46
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 421
F + +ITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS
Sbjct: 25 FIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 84
Query: 422 TEPPYSEPRFEEIKKEVSSYIKKIGYNPA 508
TEPPYSE RFEEIKKEVSSYIKKIGYNPA
Sbjct: 85 TEPPYSETRFEEIKKEVSSYIKKIGYNPA 113
Score = 114 bits (275), Expect = 7e-28
Identities = 49/60 (81%), Positives = 53/60 (88%)
Frame = +1
Query: 502 PSSVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCXIEALDAILXPARPTXK 681
P++VAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKC IEALDAIL P RPT K
Sbjct: 112 PAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDK 171
Score = 65.7 bits (153), Expect = 4e-13
Identities = 28/28 (100%), Positives = 28/28 (100%)
Frame = +3
Query: 171 DIALWKFETSKYYVTIIDAPGHRDFIKN 254
DIALWKFETSKYYVTIIDAPGHRDFIKN
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKN 28
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 174 bits (423), Expect = 8e-46
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 421
F + +ITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS
Sbjct: 41 FIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 100
Query: 422 TEPPYSEPRFEEIKKEVSSYIKKIGYNPA 508
TEPPYSE RFEEIKKEVSSYIKKIGYNPA
Sbjct: 101 TEPPYSETRFEEIKKEVSSYIKKIGYNPA 129
Score = 119 bits (287), Expect = 2e-29
Identities = 52/64 (81%), Positives = 56/64 (87%)
Frame = +1
Query: 502 PSSVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCXIEALDAILXPARPTXK 681
P++VAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKC IEALDAIL P RPT K
Sbjct: 128 PAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDK 187
Query: 682 PLRL 693
LRL
Sbjct: 188 ALRL 191
Score = 73.3 bits (172), Expect = 2e-15
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITIDIALWKFETSKYYVTIIDAPGHRDFIKN
Sbjct: 13 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 44
Score = 27.5 bits (58), Expect = 0.13
Identities = 11/11 (100%), Positives = 11/11 (100%)
Frame = +1
Query: 124 WVLDKLKAERE 156
WVLDKLKAERE
Sbjct: 1 WVLDKLKAERE 11
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 174 bits (423), Expect = 8e-46
Identities = 84/89 (94%), Positives = 86/89 (96%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 421
F + +ITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS
Sbjct: 98 FIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 157
Query: 422 TEPPYSEPRFEEIKKEVSSYIKKIGYNPA 508
TEPPYSE RFEEIKKEVSSYIKKIGYNPA
Sbjct: 158 TEPPYSETRFEEIKKEVSSYIKKIGYNPA 186
Score = 119 bits (287), Expect = 2e-29
Identities = 52/64 (81%), Positives = 56/64 (87%)
Frame = +1
Query: 502 PSSVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCXIEALDAILXPARPTXK 681
P++VAFVPISGWHGDNMLE S+KMPWFKGW VERKEGK +GKC IEALDAIL P RPT K
Sbjct: 185 PAAVAFVPISGWHGDNMLEVSSKMPWFKGWTVERKEGKVEGKCLIEALDAILPPTRPTDK 244
Query: 682 PLRL 693
LRL
Sbjct: 245 ALRL 248
Score = 112 bits (269), Expect = 4e-27
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE
Sbjct: 18 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 73.3 bits (172), Expect = 2e-15
Identities = 32/32 (100%), Positives = 32/32 (100%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITIDIALWKFETSKYYVTIIDAPGHRDFIKN
Sbjct: 70 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 101
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 165 bits (401), Expect = 4e-43
Identities = 80/89 (89%), Positives = 83/89 (93%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 421
F + +ITGTSQADCAVLIVAAG GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD
Sbjct: 98 FIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDM 157
Query: 422 TEPPYSEPRFEEIKKEVSSYIKKIGYNPA 508
T+PPYSE RFEEIKKEVSSYIKKIGYN A
Sbjct: 158 TDPPYSEARFEEIKKEVSSYIKKIGYNTA 186
Score = 114 bits (274), Expect = 9e-28
Identities = 50/63 (79%), Positives = 55/63 (87%)
Frame = +1
Query: 505 SSVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCXIEALDAILXPARPTXKP 684
+SVAFVPISGWHGDNMLEPS K PW+KGW+VERK+G ADGK IEALDAIL P+RPT K
Sbjct: 186 ASVAFVPISGWHGDNMLEPSPKTPWYKGWKVERKDGNADGKTLIEALDAILPPSRPTDKA 245
Query: 685 LRL 693
LRL
Sbjct: 246 LRL 248
Score = 112 bits (269), Expect = 4e-27
Identities = 51/51 (100%), Positives = 51/51 (100%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE
Sbjct: 18 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 68
Score = 72.1 bits (169), Expect = 5e-15
Identities = 31/32 (96%), Positives = 32/32 (100%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITIDIALWKFET+KYYVTIIDAPGHRDFIKN
Sbjct: 70 GITIDIALWKFETAKYYVTIIDAPGHRDFIKN 101
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 22.6 bits (46), Expect = 3.8
Identities = 7/28 (25%), Positives = 15/28 (53%)
Frame = -1
Query: 562 KAPTCCLRAIQKWARKRQSWVVANLLDV 479
+ P + I+ W +W++ N+LD+
Sbjct: 490 RQPEPLIELIEHWMPLLPNWILENILDM 517
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = +3
Query: 210 VTIIDAPGHRDFI 248
VT +D PGH FI
Sbjct: 195 VTFLDTPGHAAFI 207
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 8.7
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +3
Query: 414 WIPLNHHTVSPDLRKSRRKY 473
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,994
Number of Sequences: 438
Number of extensions: 4392
Number of successful extensions: 28
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21926700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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