Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0879
(712 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha ... 136 1e-32
At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha ... 136 1e-32
At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha ... 136 1e-32
At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha ... 136 1e-32
At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,... 90 1e-18
At5g10630.1 68418.m01231 elongation factor 1-alpha, putative / E... 74 1e-13
At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA) ide... 44 1e-04
At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,... 42 3e-04
At2g45030.1 68415.m05606 mitochondrial elongation factor, putati... 29 2.3
At1g45332.1 68414.m05195 mitochondrial elongation factor, putati... 29 2.3
At5g39900.1 68418.m04839 GTP-binding protein LepA, putative GTP-... 29 3.0
At3g01360.1 68416.m00057 expressed protein contains Pfam profile... 29 3.0
At5g08650.1 68418.m01029 GTP-binding protein LepA, putative 29 4.0
At1g62750.1 68414.m07082 elongation factor Tu family protein sim... 29 4.0
At3g11410.1 68416.m01392 protein phosphatase 2C, putative / PP2C... 28 5.3
At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase fa... 28 7.0
At5g38140.1 68418.m04596 histone-like transcription factor (CBF/... 27 9.3
At2g06030.1 68415.m00660 expressed protein 27 9.3
>At5g60390.1 68418.m07574 elongation factor 1-alpha / EF-1-alpha
identical to SWISS-PROT:P13905 elongation factor 1-alpha
(EF-1-alpha) [Arabidopsis thaliana]
Length = 449
Score = 136 bits (330), Expect = 1e-32
Identities = 64/88 (72%), Positives = 76/88 (86%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 421
F + +ITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 422 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 505
T P YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
SGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 18 SGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITIDIALWKFET+KYY T+IDAPGHRDFIKN
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKN 101
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +1
Query: 502 PSSVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCXIEALDAILXPARPTXK 681
P + FVPISG+ GDNM+E ST + W+K G +EALD I P RP+ K
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDK 232
Query: 682 PLRL 693
PLRL
Sbjct: 233 PLRL 236
>At1g07940.1 68414.m00863 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 136 bits (330), Expect = 1e-32
Identities = 64/88 (72%), Positives = 76/88 (86%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 421
F + +ITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 422 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 505
T P YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
SGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 18 SGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITIDIALWKFET+KYY T+IDAPGHRDFIKN
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKN 101
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +1
Query: 502 PSSVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCXIEALDAILXPARPTXK 681
P + FVPISG+ GDNM+E ST + W+K G +EALD I P RP+ K
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDK 232
Query: 682 PLRL 693
PLRL
Sbjct: 233 PLRL 236
>At1g07930.1 68414.m00862 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 136 bits (330), Expect = 1e-32
Identities = 64/88 (72%), Positives = 76/88 (86%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 421
F + +ITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 422 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 505
T P YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
SGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 18 SGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITIDIALWKFET+KYY T+IDAPGHRDFIKN
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKN 101
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +1
Query: 502 PSSVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCXIEALDAILXPARPTXK 681
P + FVPISG+ GDNM+E ST + W+K G +EALD I P RP+ K
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDK 232
Query: 682 PLRL 693
PLRL
Sbjct: 233 PLRL 236
>At1g07920.1 68414.m00861 elongation factor 1-alpha / EF-1-alpha
identical to GB:CAA34456 from [Arabidopsis thaliana]
(Plant Mol. Biol. 14 (1), 107-110 (1990))
Length = 449
Score = 136 bits (330), Expect = 1e-32
Identities = 64/88 (72%), Positives = 76/88 (86%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDS 421
F + +ITGTSQADCAVLI+ + TG FEAGISK+GQTREHALLAFTLGVKQ+I NKMD+
Sbjct: 98 FIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDA 157
Query: 422 TEPPYSEPRFEEIKKEVSSYIKKIGYNP 505
T P YS+ R++EI KEVSSY+KK+GYNP
Sbjct: 158 TTPKYSKARYDEIIKEVSSYLKKVGYNP 185
Score = 97.1 bits (231), Expect = 1e-20
Identities = 45/51 (88%), Positives = 46/51 (90%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
SGKSTTTGHLIYK GGIDKR IE+FEKEA EM K SFKYAWVLDKLKAERE
Sbjct: 18 SGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Score = 69.7 bits (163), Expect = 2e-12
Identities = 29/32 (90%), Positives = 31/32 (96%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITIDIALWKFET+KYY T+IDAPGHRDFIKN
Sbjct: 70 GITIDIALWKFETTKYYCTVIDAPGHRDFIKN 101
Score = 56.8 bits (131), Expect = 1e-08
Identities = 30/64 (46%), Positives = 37/64 (57%)
Frame = +1
Query: 502 PSSVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCXIEALDAILXPARPTXK 681
P + FVPISG+ GDNM+E ST + W+K G +EALD I P RP+ K
Sbjct: 185 PDKIPFVPISGFEGDNMIERSTNLDWYK------------GPTLLEALDQINEPKRPSDK 232
Query: 682 PLRL 693
PLRL
Sbjct: 233 PLRL 236
>At1g18070.1 68414.m02236 EF-1-alpha-related GTP-binding protein,
putative similar to EF-1-alpha-related GTP-binding
protein gi|1009232|gb|AAA79032
Length = 532
Score = 90.2 bits (214), Expect = 1e-18
Identities = 42/83 (50%), Positives = 59/83 (71%)
Frame = +2
Query: 254 LITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPP 433
+I+G SQAD VL+++A GEFE G + GQTREH LA TLGV +LIV VNKMD
Sbjct: 196 MISGASQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVVNKMDDPTVN 255
Query: 434 YSEPRFEEIKKEVSSYIKKIGYN 502
+S+ R++EI++++ ++K GYN
Sbjct: 256 WSKERYDEIEQKMVPFLKASGYN 278
Score = 46.0 bits (104), Expect = 2e-05
Identities = 19/50 (38%), Positives = 34/50 (68%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 153
+GKST G +++ G +D R I+K+EKEA++ + S+ A+++D + ER
Sbjct: 112 AGKSTIGGQILFLSGQVDDRQIQKYEKEAKDKSRESWYMAYIMDTNEEER 161
Score = 34.7 bits (76), Expect = 0.061
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
G T+++ FET TI+DAPGH+ ++ N
Sbjct: 164 GKTVEVGRAHFETESTRFTILDAPGHKSYVPN 195
>At5g10630.1 68418.m01231 elongation factor 1-alpha, putative /
EF-1-alpha, putative contains similarity to
SWISS-PROT:Q9YAV0 elongation factor 1-alpha (EF-1-alpha)
[Aeropyrum pernix]
Length = 667
Score = 73.7 bits (173), Expect = 1e-13
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Frame = +2
Query: 242 FHQELITGTSQADCAVLIVAAGTGEFEAGISK-NGQTREHALLAFTLGVKQLIVGVNKMD 418
F +I G +QAD A+L++ A G FEAG GQTREHA + GV+Q+IV +NKMD
Sbjct: 330 FVPNMIAGATQADAAILVIDASVGAFEAGFDNLKGQTREHARVLRGFGVEQVIVAINKMD 389
Query: 419 STEPPYSEPRFEEIKKEVSSYIK 487
YS+ RF+ IK+ V S+++
Sbjct: 390 IV--GYSKERFDLIKQHVGSFLQ 410
Score = 60.9 bits (141), Expect = 8e-10
Identities = 27/51 (52%), Positives = 36/51 (70%)
Frame = +1
Query: 4 SGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 156
SGKST +G L++ G I ++ + K+EKEA+ GKGSF YAW LD+ ERE
Sbjct: 250 SGKSTLSGRLLHLLGRISQKQMHKYEKEAKLQGKGSFAYAWALDESAEERE 300
Score = 39.9 bits (89), Expect = 0.002
Identities = 13/32 (40%), Positives = 25/32 (78%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GIT+ +A+ F + +++V ++D+PGH+DF+ N
Sbjct: 302 GITMTVAVAYFNSKRHHVVLLDSPGHKDFVPN 333
>At4g20360.1 68417.m02971 elongation factor Tu / EF-Tu (TUFA)
identical to SWISS-PROT:P17745 elongation factor Tu,
chloroplast precursor (EF-Tu) [Arabidopsis thaliana]
Length = 476
Score = 43.6 bits (98), Expect = 1e-04
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 215 HH*CSWTQRFHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 394
H C + + +ITG +Q D A+L+V+ G QT+EH LLA +GV +
Sbjct: 146 HVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMP-------QTKEHILLAKQVGVPDM 198
Query: 395 IVGVNKMDSTEPPYSEPRFE-EIKKEVSSY 481
+V +NK D + E E+++ +SSY
Sbjct: 199 VVFLNKEDQVDDAELLELVELEVRELLSSY 228
Score = 36.7 bits (81), Expect = 0.015
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITI+ A ++ET + +D PGH D++KN
Sbjct: 127 GITINTATVEYETENRHYAHVDCPGHADYVKN 158
>At4g02930.1 68417.m00399 elongation factor Tu, putative / EF-Tu,
putative similar to mitochondrial elongation factor Tu
[Arabidopsis thaliana] gi|1149571|emb|CAA61511
Length = 454
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/91 (30%), Positives = 44/91 (48%)
Frame = +2
Query: 215 HH*CSWTQRFHQELITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 394
H C + + +ITG +Q D +L+V+ G QT+EH LLA +GV L
Sbjct: 134 HVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMP-------QTKEHILLARQVGVPSL 186
Query: 395 IVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 487
+ +NK+D + P E +E+ S+ K
Sbjct: 187 VCFLNKVDVVDDPELLELVEMELRELLSFYK 217
Score = 37.1 bits (82), Expect = 0.011
Identities = 15/32 (46%), Positives = 22/32 (68%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDFIKN 254
GITI A ++ET+K + +D PGH D++KN
Sbjct: 115 GITIATAHVEYETAKRHYAHVDCPGHADYVKN 146
>At2g45030.1 68415.m05606 mitochondrial elongation factor, putative
similar to SP|P25039 Elongation factor G 1,
mitochondrial precursor (mEF-G-1) {Saccharomyces
cerevisiae}; contains Pfam profiles PF00009: Elongation
factor Tu GTP binding domain, PF03764: Elongation factor
G domain IV, PF00679: Elongation factor G C-terminus
Length = 754
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDF 245
GITI A Y V IID PGH DF
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDF 146
>At1g45332.1 68414.m05195 mitochondrial elongation factor, putative
similar to mitochondrial elongation factor GI:3917 from
[Saccharomyces cerevisiae]
Length = 754
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDF 245
GITI A Y V IID PGH DF
Sbjct: 118 GITIQSAATYCTWKDYKVNIIDTPGHVDF 146
>At5g39900.1 68418.m04839 GTP-binding protein LepA, putative
GTP-binding protein GUF1 - Saccharomyces cerevisiae,
PIR:S50374
Length = 661
Score = 29.1 bits (62), Expect = 3.0
Identities = 19/51 (37%), Positives = 26/51 (50%)
Frame = +3
Query: 192 ETSKYYVTIIDAPGHRDFIKN*SQEPLRLIALCSS*LPVPVNSKLVSLRTV 344
E S Y + +ID PGH DF S E R ++ C L V ++ V +TV
Sbjct: 131 EASGYLLNLIDTPGHVDF----SYEVSRSLSACQGALLVVDAAQGVQAQTV 177
>At3g01360.1 68416.m00057 expressed protein contains Pfam profile
PF04819: Family of unknown function (DUF716) (Plant
viral-response family)
Length = 319
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/94 (26%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +2
Query: 224 CSWTQRFHQELITGTSQADCAV-LIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIV 400
C +H+ T Q +C + L+V TG F +KNG R+ LG + +
Sbjct: 228 CKGHGDYHRAKAIATLQFNCHLALMVVVATGLFSVIANKNGYLRQDHSKYRPLGAELENL 287
Query: 401 GVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYN 502
+DS E +E+++E S+ K++G N
Sbjct: 288 STFTLDSDEE-------DEVREE-SNVAKEVGLN 313
>At5g08650.1 68418.m01029 GTP-binding protein LepA, putative
Length = 681
Score = 28.7 bits (61), Expect = 4.0
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 4/66 (6%)
Frame = +3
Query: 159 GITIDIAL----WKFETSKYYVTIIDAPGHRDFIKN*SQEPLRLIALCSS*LPVPVNSKL 326
GITI + + +E + + + +ID PGH DF S E R +A C L V S+
Sbjct: 133 GITIKLQAARMRYVYEDTPFCLNLIDTPGHVDF----SYEVSRSLAACEGALLVVDASQG 188
Query: 327 VSLRTV 344
V +T+
Sbjct: 189 VEAQTL 194
>At1g62750.1 68414.m07082 elongation factor Tu family protein
similar to elongation factor G SP:P34811 [Glycine max
(Soybean)]
Length = 783
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 159 GITIDIALWKFETSKYYVTIIDAPGHRDF 245
GITI A K+ + IID PGH DF
Sbjct: 146 GITITSAATTTFWDKHRINIIDTPGHVDF 174
>At3g11410.1 68416.m01392 protein phosphatase 2C, putative / PP2C,
putative identical to protein phosphatase 2C (PP2C)
GB:P49598 [Arabidopsis thaliana]; contains Pfam profile
PF00481: Protein phosphatase 2C; identical to cDNA
protein phosphatase 2C GI:633027
Length = 399
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +1
Query: 154 EXVSQSILLSGSSKLASTMLPSLMLLDTEISSRTDHRNLSG*LRCAHRSCR 306
+ V + + + S + TM+ S +D E+S R + ++G R SCR
Sbjct: 159 DIVKKEVEVMASDEWTETMVKSFQKMDKEVSQRECNLVVNGATRSMKNSCR 209
>At1g26130.1 68414.m03190 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from Homo
sapiens [SP|Q9Y2Q0, SP|O43520], Mus musculus [SP|P98200,
SP|P70704], {Bos taurus} SP|Q29449; contains InterPro
accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1184
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/53 (28%), Positives = 24/53 (45%)
Frame = +2
Query: 320 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSS 478
E+G +TR+H G++ LI+ ++D E R E K VS+
Sbjct: 629 ESGRKYEKETRDHVNEYADAGLRTLILAYRELDENEYEVFTERISEAKNSVSA 681
>At5g38140.1 68418.m04596 histone-like transcription factor
(CBF/NF-Y) family protein similar to CCAAT-binding
transcription factor subunit AAB-1 (GI:2583171)
[Neurospora crassa]; contains a CBF/NF-Y subunit
signature (PDOC00578) presernt in members of
histone-like transcription factor family; contains Pfam
PF00808 : Histone-like transcription factor (CBF/NF-Y)
and archaeal histone
Length = 195
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 420 PLNHHTVSPDLRKSRRKYPHTSRRLATTQLCRFRAHFWMARRQHVGAF 563
P +H+T+ P L + R +P TS+ + L FW +R+ +G F
Sbjct: 16 PRSHNTM-PMLDQFRSNHPETSKIEGVSSLDTALKVFWNNQREQLGNF 62
>At2g06030.1 68415.m00660 expressed protein
Length = 243
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 383 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPALSLS 520
+KQLI+ N D + E +K+ + +KK+G+N AL+L+
Sbjct: 126 LKQLIL-TNSRDEAVAAFVETAGGSLKELSLNNVKKVGHNTALALA 170
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,049,143
Number of Sequences: 28952
Number of extensions: 343503
Number of successful extensions: 991
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 984
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1535986264
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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