Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0878
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       23   2.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     23   2.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      23   2.6  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      23   2.6  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   7.9  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/49 (22%), Positives = 25/49 (51%)
 Frame = -3

Query: 714 VEIDDSTSIIEGLVYHVXNNWEQLIPASWPHTSLAGGYLQ*DETPPWEQ 568
           ++ D +++ + G      NN++Q++    PHT+   G  Q  +  P ++
Sbjct: 2   IDKDMNSACMRGGSVRTLNNYQQVMEPRSPHTAWQFGVSQIVKREPMDE 50


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = +3

Query: 699 YHRFPHWGFAN 731
           YH+ PH+GF N
Sbjct: 442 YHKDPHYGFHN 452


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 137 RXWHCLGH*RQL*HHGMLRAERR 69
           R WH LG   Q  ++ + R ER+
Sbjct: 515 RRWHALGREEQAKYYELARRERQ 537


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 137 RXWHCLGH*RQL*HHGMLRAERR 69
           R WH LG   Q  ++ + R ER+
Sbjct: 407 RRWHALGREEQAKYYELARRERQ 429


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/47 (23%), Positives = 21/47 (44%)
 Frame = -3

Query: 705 DDSTSIIEGLVYHVXNNWEQLIPASWPHTSLAGGYLQ*DETPPWEQL 565
           +D   + + L+ H  N W +L     PH  +   +L   +  P E++
Sbjct: 79  EDVHKVFQHLMIHRPNWWHELETKFNPHHEIKLQHLHQSKFNPHEEV 125


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,473
Number of Sequences: 336
Number of extensions: 3741
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)