Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0878
(740 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 54 2e-08
SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces ... 51 2e-07
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 49 8e-07
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 41 2e-04
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 41 2e-04
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 38 0.001
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 35 0.011
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 35 0.014
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 31 0.13
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 31 0.23
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 30 0.30
SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8 ... 27 2.8
SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr 3|... 26 6.5
SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|c... 26 6.5
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 26 6.5
SPACUNK4.06c |rpb7|SPAPYUK71.02|DNA-directed RNA polymerase comp... 26 6.5
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 54.4 bits (125), Expect = 2e-08
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 3/81 (3%)
Frame = +1
Query: 265 GRIDILINNAGI-LRDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMT 441
GR+D++I NAGI + S E W + ++L GA+ T AA F+KQ G ++ T
Sbjct: 87 GRLDVMIANAGIAIPHLSLEDKNEDIWTKVVGINLNGAYYTAQAAGHHFKKQGKGSLIFT 146
Query: 442 SSNAGLFGNFGQ--ANYSAAK 498
+S +G N+ Q A+Y A K
Sbjct: 147 ASMSGHIANWPQQWASYHATK 167
>SPAC22A12.17c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 261
Score = 51.2 bits (117), Expect = 2e-07
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Frame = +1
Query: 262 FGRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMT 441
F IDI++ N GI KS MT +++ V+L G F H A F+KQ +G +V T
Sbjct: 96 FDTIDIVVPNNGICTGKSAIDMTYEEFANEINVNLLGVFNVAHNAGPIFQKQGHGSLVAT 155
Query: 442 SSNAGLFGNFGQAN--YSAAKLGLV 510
+S +G+ N Q Y+ +K G++
Sbjct: 156 ASMSGVVVNVPQQQCAYNTSKAGVI 180
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 48.8 bits (111), Expect = 8e-07
Identities = 27/81 (33%), Positives = 40/81 (49%)
Frame = +1
Query: 265 GRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMTS 444
G ID+LINNAG+ D F +++ + WD ++ L+G + T KQ G ++
Sbjct: 72 GPIDVLINNAGLADDTPFEQLSHESWDHDVSLVLRGNYLTQRYVIPHMAKQGKGGSIVNI 131
Query: 445 SNAGLFGNFGQANYSAAKLGL 507
+ G YSAAK GL
Sbjct: 132 GSVNGHIYLGSPAYSAAKAGL 152
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 41.1 bits (92), Expect = 2e-04
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +1
Query: 259 NFGRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVM 438
+FGRID+L+NNAG TE+ I ++ GA + A FR Q G I+
Sbjct: 39 HFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVIKAITPIFRSQHNGMIIN 98
Query: 439 TSSNAG 456
SS G
Sbjct: 99 VSSIGG 104
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 41.1 bits (92), Expect = 2e-04
Identities = 24/66 (36%), Positives = 32/66 (48%)
Frame = +1
Query: 259 NFGRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVM 438
+FGRID+L+NNAG TE+ I ++ GA + A FR Q G I+
Sbjct: 39 HFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEVIKAITPIFRSQHNGMIIN 98
Query: 439 TSSNAG 456
SS G
Sbjct: 99 VSSIGG 104
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 38.3 bits (85), Expect = 0.001
Identities = 28/91 (30%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 238 ANKNGNDNFGRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQ 417
A K+ FG +DI+INNAG F ++ V+ G T A R+
Sbjct: 65 AFKDAKRRFGNVDIVINNAGYGLVGEFESYNIEEMHRQMNVNFWGVAYITKEALNLMRES 124
Query: 418 -KYGRIVMTSSNAGLFGNFGQANYSAAKLGL 507
K GRI+ SS AG + + + Y+A+K +
Sbjct: 125 GKGGRILQISSVAGYYPSPCLSMYNASKFAV 155
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 35.1 bits (77), Expect = 0.011
Identities = 20/75 (26%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Frame = +1
Query: 271 IDILINNAGILRDK-SFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSS 447
ID+L N+GI + + + E+ W+ ++ G A + K+K +++ TSS
Sbjct: 83 IDVLWLNSGICQSYYTVMEAPEEVWNAHYQTNVLGPIHVFKAFYPLLTKKKTRQVIFTSS 142
Query: 448 NAGLFGNFGQANYSA 492
G G+F +SA
Sbjct: 143 ECGSMGDFRATGFSA 157
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 34.7 bits (76), Expect = 0.014
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Frame = +1
Query: 262 FGRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMT 441
F I +++ NAG+ +S +++ + ++ ++ + + F+KQ +G ++ T
Sbjct: 96 FKEIHVVVANAGMPFRRSVLDSPPHEFEKVMNINTNSVYRVAYYMGKIFKKQGFGNLIAT 155
Query: 442 SSNAGLFGNFGQ--ANYSAAK 498
+S + N Q A Y A+K
Sbjct: 156 ASMSATIVNAPQHIAAYCASK 176
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 31.5 bits (68), Expect = 0.13
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 1/83 (1%)
Frame = +1
Query: 262 FGRIDILINNAGI-LRDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVM 438
F ID+LINNAG+ L + D + ++ G T A F + G I+
Sbjct: 83 FADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMMAMTRAVLPIFYSKNKGDILN 142
Query: 439 TSSNAGLFGNFGQANYSAAKLGL 507
S AG G + Y + K L
Sbjct: 143 VGSIAGRESYVGGSVYCSTKSAL 165
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 30.7 bits (66), Expect = 0.23
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Frame = +1
Query: 271 IDILINNAGILRD-KSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSS 447
ID+L N+GI + + K +++ W ++ G A + ++ K IV TSS
Sbjct: 84 IDVLWVNSGISKSFQPVLKTSDELWMSHYQTNVLGPIHVYQAFYHLLKEGKLKNIVFTSS 143
Query: 448 NAGLFGNFGQANYSA 492
A G YSA
Sbjct: 144 MAACMGGVRPNTYSA 158
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 30.3 bits (65), Expect = 0.30
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = +1
Query: 262 FGRIDILINNAGILRDKSFTKMTEQD---WDLIQAVHLKGAFKTTHAAWETFRKQKYGRI 432
FG++D +I NAG+L + K+ + D W + ++ +T A RK K G I
Sbjct: 76 FGKLDSVILNAGVL--EPIAKIADADINEWRKLFDINFFSVVETVKYAIPHLRKTK-GTI 132
Query: 433 VMTSSNAGL 459
V+ SS A +
Sbjct: 133 VIVSSGAAV 141
>SPAC6F12.14 |cut23|apc8|anaphase-promoting complex subunit Apc8
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 565
Score = 27.1 bits (57), Expect = 2.8
Identities = 9/13 (69%), Positives = 12/13 (92%)
Frame = -1
Query: 383 VLKAPFKWTAWIK 345
VLKAPF W+AW++
Sbjct: 200 VLKAPFFWSAWLE 212
>SPCC1919.12c |||aminopeptidase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 843
Score = 25.8 bits (54), Expect = 6.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +3
Query: 546 YNIKVNTIVPTAASRLTEDILPPEMYE 626
Y+I V TI+P + LT+ + ++Y+
Sbjct: 585 YDILVETILPAGSQTLTDSVFSSKLYK 611
>SPCC757.12 |||alpha-amylase homolog |Schizosaccharomyces pombe|chr
3|||Manual
Length = 625
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 504 FSGLANTLAIEGAKYNIKVNTIVP 575
F LAN++AI G NI + +VP
Sbjct: 138 FDALANSMAIPGPTDNISYSNLVP 161
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 25.8 bits (54), Expect = 6.5
Identities = 15/48 (31%), Positives = 21/48 (43%)
Frame = -3
Query: 327 HFSEALITENASIVDKNINPPKIIIAVFISFSPSTTEL*SATATPPLS 184
H S A T S + NI+P + +S SPS T + P +S
Sbjct: 727 HLSTAFSTAPVSTIVSNISPLPTVAPPNVSGSPSETPISKPEKVPVVS 774
>SPACUNK4.06c |rpb7|SPAPYUK71.02|DNA-directed RNA polymerase complex
II subunit Rpb7|Schizosaccharomyces pombe|chr 1|||Manual
Length = 172
Score = 25.8 bits (54), Expect = 6.5
Identities = 11/29 (37%), Positives = 13/29 (44%)
Frame = +1
Query: 397 WETFRKQKYGRIVMTSSNAGLFGNFGQAN 483
W FR + IV T + G F N G N
Sbjct: 80 WRPFRGEVVDAIVTTVNKMGFFANIGPLN 108
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,970,306
Number of Sequences: 5004
Number of extensions: 59623
Number of successful extensions: 162
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 160
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 351258950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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