Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0877
         (788 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0213 + 20974712-20975413                                         31   1.0  
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043...    29   3.2  
02_04_0033 + 19069801-19070142                                         29   3.2  
08_02_1111 + 24377268-24377444,24377543-24377630,24378072-243781...    29   4.2  

>02_04_0213 + 20974712-20975413
          Length = 233

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 16/56 (28%), Positives = 26/56 (46%)
 Frame = +3

Query: 303 ITKENEEKSIQTHLELSRQEKAAWEETKMYGWQDFQDFTLRRMFKKYSQLGVAALP 470
           + +E EE+ +    E  R  +A  EE     W+DF D  L ++ ++  Q   A  P
Sbjct: 73  VDEEEEEERMDQLWERDRDARAGDEERMDLLWEDFNDELLLQLRRRQQQRAAAGTP 128


>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
            21204453-21205031,21205176-21205484,21205638-21205718,
            21205971-21206279,21207430-21207816,21207964-21208767,
            21208856-21209218,21209437-21209667,21209934-21210278,
            21210494-21210712,21210759-21210815,21210978-21211322,
            21211538-21211756,21211803-21211859,21212022-21212366,
            21212584-21212814,21213100-21213458
          Length = 4322

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 33/111 (29%), Positives = 51/111 (45%), Gaps = 6/111 (5%)
 Frame = +2

Query: 305  HEGERRE-IDTNSPGALPSRESSLGGDQDVRVAGLPGFHIA*NVQEIQSAGRCGSA*RQI 481
            H+  R E I  ++ G + S + S   D     A  PG  +A + Q++ SAGR  S   Q+
Sbjct: 2723 HKSVRTEDIRADANGKVKSVKPSASPDAPHATA--PG-EVALSEQKLASAGRDSSRAAQL 2779

Query: 482  PSFDE--NCIGMESNYATAKICSYKNESKCDLSL---EPEITEIFSTSQDP 619
            PS DE  N    +S++      S   +   DL     +P+I+    TS+ P
Sbjct: 2780 PSSDEPRNEQIKDSDHTAQPFSSAAPDQAKDLQRTFGQPDISRAPGTSESP 2830


>02_04_0033 + 19069801-19070142
          Length = 113

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = +2

Query: 230 CCIWTKRPAEEEQG 271
           CC+WTKR  EEE G
Sbjct: 85  CCLWTKREREEEGG 98


>08_02_1111 +
           24377268-24377444,24377543-24377630,24378072-24378157,
           24378358-24378511,24378723-24378883,24378964-24379632,
           24379860-24380058,24380188-24380405,24380578-24380755,
           24380859-24381358
          Length = 809

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = -2

Query: 529 SGVVRFHPDTVLIKAWNLSSGRAATPS 449
           +G++    D  +I+ WN+S GRA+T S
Sbjct: 721 AGILAIGMDNGMIELWNISGGRASTDS 747


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,440,629
Number of Sequences: 37544
Number of extensions: 385588
Number of successful extensions: 978
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 959
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 978
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2127163404
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)