Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0877
         (788 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.4  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.4  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        24   1.9  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   5.7  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    22   7.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   9.9  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   9.9  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 533 KICSYKNESKCDLSLEPEITEIFSTS-QDP 619
           KI  Y  E+     + P   EIFSTS +DP
Sbjct: 387 KILGYNLEAASKYQIVPSALEIFSTSMKDP 416


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 533 KICSYKNESKCDLSLEPEITEIFSTS-QDP 619
           KI  Y  E+     + P   EIFSTS +DP
Sbjct: 387 KILGYNLEAASKYQIVPSALEIFSTSMKDP 416


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 663 PAALCHSTQVCFNSSGSWLVENISVI 586
           P+A C +T +  N   SWL E+  V+
Sbjct: 229 PSAQCEATTMQENDKMSWLFESEDVL 254


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 5.7
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -3

Query: 105 Y*LGVGRKLH*CFFFVGLNSRCSGVIR 25
           Y LG G   H C + + ++S C G+++
Sbjct: 35  YCLGCGDSCHKCKYGIAMSSAC-GIVQ 60


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 7/17 (41%), Positives = 9/17 (52%)
 Frame = -3

Query: 639 QVCFNSSGSWLVENISV 589
           Q CF   GSW  + I +
Sbjct: 157 QTCFMKFGSWTYDGIQI 173


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 301 FEVYSHSAKLALFFLSRSL 245
           F +YS   +L L F+S SL
Sbjct: 476 FSIYSFLERLNLIFMSSSL 494


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.4 bits (43), Expect = 9.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -2

Query: 301 FEVYSHSAKLALFFLSRSL 245
           F +YS   +L L F+S SL
Sbjct: 514 FSIYSFLERLNLIFMSSSL 532


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,523
Number of Sequences: 438
Number of extensions: 4009
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24882285
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)