Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0875
(654 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 91 3e-17
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 85 1e-15
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 85 1e-15
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 75 2e-12
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 75 2e-12
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 72 1e-11
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 72 1e-11
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 72 1e-11
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 71 2e-11
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 71 2e-11
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 70 4e-11
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 70 4e-11
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 69 7e-11
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 69 7e-11
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 69 7e-11
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 69 1e-10
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 68 2e-10
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 68 2e-10
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 67 4e-10
UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5; Na... 66 5e-10
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 65 2e-09
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 64 3e-09
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 64 3e-09
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 62 1e-08
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 62 1e-08
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 61 2e-08
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 61 2e-08
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 61 2e-08
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 61 2e-08
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 60 3e-08
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 59 8e-08
UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1; My... 59 8e-08
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 59 8e-08
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 58 1e-07
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 58 1e-07
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 56 6e-07
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 54 3e-06
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 52 9e-06
UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1; Ap... 50 4e-05
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 49 9e-05
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 48 3e-04
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 44 0.003
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 43 0.007
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 43 0.007
UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1; Cela... 42 0.013
UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517; ... 42 0.017
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 42 0.017
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 41 0.023
UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3; Th... 41 0.030
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 40 0.069
UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107; ... 39 0.12
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 37 0.37
UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=... 37 0.37
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 37 0.37
UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16; c... 37 0.49
UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1; Di... 37 0.49
UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1; Pach... 37 0.49
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 35 1.5
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 35 2.0
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 34 3.4
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 34 3.4
UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Eugl... 33 4.5
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 33 7.9
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 33 7.9
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 90.6 bits (215), Expect = 3e-17
Identities = 50/93 (53%), Positives = 57/93 (61%)
Frame = -1
Query: 294 KGGG*ESKSYIIYCGNAISGAPSIRGTNQFPNPPXXXXXXXXXXXXKACAVTIVL*I*SS 115
K GG + GNA+SGAP++ GTNQFPNPP KA AVT+ L I S
Sbjct: 126 KEGGSNQNLMLFIRGNAMSGAPNMSGTNQFPNPPIMIGMTMKKIITKAWAVTMTL-IWSF 184
Query: 114 PINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 16
PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 185 PIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 82.2 bits (194), Expect = 1e-14
Identities = 39/63 (61%), Positives = 46/63 (73%)
Frame = -2
Query: 437 DEIPAKCSEKIARSTDLPLCAILDESGG*TVHPVPAPFSTILLEINNIREGGRSQNLILF 258
+E PAKC+EKI STD P CAI SGG TVHPVP P STI L + ++EGG +QNL+LF
Sbjct: 78 EETPAKCNEKIPMSTDAPACAIPLASGGYTVHPVPTPLSTIPLNKSKVKEGGSNQNLMLF 137
Query: 257 IVG 249
I G
Sbjct: 138 IRG 140
Score = 71.7 bits (168), Expect = 1e-11
Identities = 34/52 (65%), Positives = 40/52 (76%)
Frame = -3
Query: 652 IGSPPPAGSKNDVFKXRSVNNIVIAPAKTGSDNNNKNAVXPTAHTNKGIDQM 497
IGSPPPAGSK +VFK RSV +IVIAPA TGS++N+K AV T TN G+ M
Sbjct: 6 IGSPPPAGSKKEVFKFRSVKSIVIAPASTGSESNSKMAVSNTDQTNSGMRSM 57
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 85.4 bits (202), Expect = 1e-15
Identities = 47/88 (53%), Positives = 49/88 (55%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 92 PRMNNMSFWLLPPSLTLLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 151
Query: 430 ISSXXXXXXXXXXXXXXXXXXXSFDQYP 513
ISS SFDQ P
Sbjct: 152 ISSILGAINFITTIINMRMNNLSFDQMP 179
Score = 80.2 bits (189), Expect = 4e-14
Identities = 47/97 (48%), Positives = 50/97 (51%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 184
KDIGTLY AELG PGSLIGDDQIYNTIVTAHA
Sbjct: 10 KDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMP 69
Query: 185 XXXXXXXN*LVPLILGAPDIAFPQ*II*DFDSYPPPL 295
N LVPL+LGAPD+AFP+ F PP L
Sbjct: 70 IMIGGFGNWLVPLMLGAPDMAFPRMNNMSFWLLPPSL 106
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/49 (71%), Positives = 37/49 (75%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV AVG TAF AGAIT+LLTDR LNTSFFDPAGGGDPI
Sbjct: 178 MPLFVWAVGITAFLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPI 226
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 85.4 bits (202), Expect = 1e-15
Identities = 47/88 (53%), Positives = 49/88 (55%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NN+ F IVENGAGTG TVYPPLSSNIAH G SVDLAIFSLHLAG
Sbjct: 68 PRMNNMSFWLLPPSLILLISSSIVENGAGTGWTVYPPLSSNIAHGGSSVDLAIFSLHLAG 127
Query: 430 ISSXXXXXXXXXXXXXXXXXXXSFDQYP 513
ISS SFDQ P
Sbjct: 128 ISSILGAINFITTIINMRINKMSFDQMP 155
Score = 70.9 bits (166), Expect = 2e-11
Identities = 38/70 (54%), Positives = 42/70 (60%)
Frame = +2
Query: 86 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ*II 265
ELG PGSLIGDDQIYNTIVTAHA N L+PL+LGAPD+AFP+
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAFIMIFFMVMPIMIGGFGNWLIPLMLGAPDMAFPRMNN 72
Query: 266 *DFDSYPPPL 295
F PP L
Sbjct: 73 MSFWLLPPSL 82
Score = 68.5 bits (160), Expect = 1e-10
Identities = 33/49 (67%), Positives = 36/49 (73%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLF+ AVG TA AGAIT+LLTDR LNTSFFDPAGGGDPI
Sbjct: 154 MPLFIWAVGITALLLLLSLPVLAGAITMLLTDRNLNTSFFDPAGGGDPI 202
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/84 (46%), Positives = 45/84 (53%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 184
KDIGTLY AELG PG+L+GDDQIYN IVTAHA
Sbjct: 14 KDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAFVMIFFMVMP 73
Query: 185 XXXXXXXN*LVPLILGAPDIAFPQ 256
N LVPL++GAPD+AFP+
Sbjct: 74 IMIGGFGNWLVPLMIGAPDMAFPR 97
Score = 73.7 bits (173), Expect = 3e-12
Identities = 38/63 (60%), Positives = 42/63 (66%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDLAIFSLHLAG
Sbjct: 96 PRMNNMSFWLXPPSFLLLLASSTVEAGAGTGWTVYPPLAGNLAHAGASVDLAIFSLHLAG 155
Query: 430 ISS 438
ISS
Sbjct: 156 ISS 158
Score = 57.6 bits (133), Expect = 2e-07
Identities = 29/48 (60%), Positives = 32/48 (66%)
Frame = +3
Query: 510 PLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
PLFV +V TA A IT+LLTDR LNT+FFDPAGGGDPI
Sbjct: 183 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPI 230
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 74.5 bits (175), Expect = 2e-12
Identities = 37/63 (58%), Positives = 41/63 (65%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NN+ F VE+GAGTG TVYPPLS N AH G SVDLAIFSLHLAG
Sbjct: 78 PRLNNMSFWFLPPSLSLLLMSAAVESGAGTGWTVYPPLSGNTAHAGPSVDLAIFSLHLAG 137
Query: 430 ISS 438
+SS
Sbjct: 138 VSS 140
Score = 64.5 bits (150), Expect = 2e-09
Identities = 34/70 (48%), Positives = 40/70 (57%)
Frame = +2
Query: 86 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ*II 265
ELG PGS IG+DQ+YN +VTAHA N LVPL+LGAPD+AFP+
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAFVMIFFLVMPMMIGGFGNWLVPLMLGAPDMAFPRLNN 82
Query: 266 *DFDSYPPPL 295
F PP L
Sbjct: 83 MSFWFLPPSL 92
Score = 60.5 bits (140), Expect = 3e-08
Identities = 30/49 (61%), Positives = 33/49 (67%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+ LFV +V TA AGAIT+LLTDR NTSFFDPAGGGDPI
Sbjct: 164 VSLFVWSVKITAILLLLSLPVLAGAITMLLTDRNFNTSFFDPAGGGDPI 212
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 184
KDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 13 KDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 72
Query: 185 XXXXXXXN*LVPLILGAPDIAFPQ 256
N LVPL++GAPD+AFP+
Sbjct: 73 VMIGGFGNWLVPLMIGAPDMAFPR 96
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 430 ISS 438
+SS
Sbjct: 155 VSS 157
Score = 57.6 bits (133), Expect = 2e-07
Identities = 29/48 (60%), Positives = 32/48 (66%)
Frame = +3
Query: 510 PLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
PLFV +V TA A IT+LLTDR LNT+FFDPAGGGDPI
Sbjct: 182 PLFVWSVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPI 229
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 72.1 bits (169), Expect = 1e-11
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 184
KDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 13 KDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 72
Query: 185 XXXXXXXN*LVPLILGAPDIAFPQ 256
N LVPL++GAPD+AFP+
Sbjct: 73 ILIGGFGNWLVPLMIGAPDMAFPR 96
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NN+ F VE GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSFLLLLASSGVEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 154
Query: 430 ISS 438
+SS
Sbjct: 155 VSS 157
Score = 58.8 bits (136), Expect = 1e-07
Identities = 30/48 (62%), Positives = 32/48 (66%)
Frame = +3
Query: 510 PLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
PLFV AV TA A IT+LLTDR LNT+FFDPAGGGDPI
Sbjct: 182 PLFVWAVLVTAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPI 229
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 71.7 bits (168), Expect = 1e-11
Identities = 37/84 (44%), Positives = 44/84 (52%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 184
KDIGTLY AEL PG+L+GDDQIYN IVTAHA
Sbjct: 2 KDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAFVMIFFMVMP 61
Query: 185 XXXXXXXN*LVPLILGAPDIAFPQ 256
N L+PL++GAPD+AFP+
Sbjct: 62 IMIGGFGNWLIPLMIGAPDMAFPR 85
Score = 70.5 bits (165), Expect = 3e-11
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NN+ F +E GAGTG TVYPPL+ N+AH G SVDL IFSLHLAG
Sbjct: 84 PRMNNMSFWLLPPSFLLLLASSGIEAGAGTGWTVYPPLAGNLAHAGASVDLTIFSLHLAG 143
Query: 430 ISS 438
ISS
Sbjct: 144 ISS 146
Score = 43.2 bits (97), Expect = 0.006
Identities = 23/41 (56%), Positives = 25/41 (60%)
Frame = +3
Query: 510 PLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDP 632
PLFV AV TA A IT+LLTDR LNT+FFDP
Sbjct: 171 PLFVWAVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDP 211
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 71.3 bits (167), Expect = 2e-11
Identities = 36/63 (57%), Positives = 41/63 (65%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NNI F +VE GAGTG TVYPPL+S AH G SVD+AIFSLHLAG
Sbjct: 96 PRLNNISFWLLPPALFLLLGSSLVEQGAGTGWTVYPPLASIQAHSGGSVDMAIFSLHLAG 155
Query: 430 ISS 438
+SS
Sbjct: 156 LSS 158
Score = 66.9 bits (156), Expect = 4e-10
Identities = 37/98 (37%), Positives = 47/98 (47%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 184
KDIG+LY EL +PGS++GDD +YN IVTAHA
Sbjct: 14 KDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAFVMIFFLVMP 73
Query: 185 XXXXXXXN*LVPLILGAPDIAFPQ*II*DFDSYPPPLY 298
N VPL++GAPD+AFP+ F PP L+
Sbjct: 74 TMIGGFGNWFVPLMIGAPDMAFPRLNNISFWLLPPALF 111
Score = 62.1 bits (144), Expect = 1e-08
Identities = 31/49 (63%), Positives = 34/49 (69%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
IPLFV +V TA AGAIT+LLTDR NT+FFDPAGGGDPI
Sbjct: 182 IPLFVWSVLITAILLLLSLPVLAGAITMLLTDRYFNTTFFDPAGGGDPI 230
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 71.3 bits (167), Expect = 2e-11
Identities = 41/97 (42%), Positives = 48/97 (49%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 184
KDIGTLY AELG PG+L+G+D IYN IVTAHA
Sbjct: 13 KDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAFVMIFFMVMP 72
Query: 185 XXXXXXXN*LVPLILGAPDIAFPQ*II*DFDSYPPPL 295
N LVPL++GAPD+AFP+ F PP L
Sbjct: 73 IMIGGFGNWLVPLMIGAPDMAFPRMNNMSFWLLPPSL 109
Score = 69.7 bits (163), Expect = 6e-11
Identities = 34/63 (53%), Positives = 40/63 (63%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NN+ F +VE GAGTG TVYPPL+ N +H G SVDL IFSLHLAG
Sbjct: 95 PRMNNMSFWLLPPSLLLLLASAMVEAGAGTGWTVYPPLAGNYSHPGASVDLTIFSLHLAG 154
Query: 430 ISS 438
+SS
Sbjct: 155 VSS 157
Score = 57.6 bits (133), Expect = 2e-07
Identities = 29/48 (60%), Positives = 32/48 (66%)
Frame = +3
Query: 510 PLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
PLFV +V TA A IT+LLTDR LNT+FFDPAGGGDPI
Sbjct: 182 PLFVWSVLITAVLLLLSLPVLAAGITMLLTDRNLNTTFFDPAGGGDPI 229
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 70.1 bits (164), Expect = 4e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P INNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 430 ISS 438
ISS
Sbjct: 156 ISS 158
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV ++ TAF + IT+LL DR NTSFF+ +GGGDPI
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPI 230
Score = 42.3 bits (95), Expect = 0.010
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 178
KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 12 KDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLV 71
Query: 179 XXXXXXXXXN*LVPLILGAPDIAFPQ 256
N L+PL++GA D AFP+
Sbjct: 72 MPALIGGFGNYLLPLMIGATDTAFPR 97
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 70.1 bits (164), Expect = 4e-11
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P INNI F +VE+GAGTG TVYPPLSS AH G SVDLAIF+LHL
Sbjct: 96 PRINNIAFWVLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFALHLTS 155
Query: 430 ISS 438
ISS
Sbjct: 156 ISS 158
Score = 50.8 bits (116), Expect = 3e-05
Identities = 24/49 (48%), Positives = 31/49 (63%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV ++ TAF + IT+LL DR NTSFF+ +GGGDPI
Sbjct: 182 LPLFVWSIFITAFLLLLSLPVLSAGITMLLLDRNFNTSFFEVSGGGDPI 230
Score = 42.3 bits (95), Expect = 0.010
Identities = 27/86 (31%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 178
KDI LY EL PGS L G+ Q++N +V HA
Sbjct: 12 KDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLV 71
Query: 179 XXXXXXXXXN*LVPLILGAPDIAFPQ 256
N L+PL++GA D AFP+
Sbjct: 72 MPALIGGFGNYLLPLMIGATDTAFPR 97
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 69.3 bits (162), Expect = 7e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 430 ISS 438
ISS
Sbjct: 155 ISS 157
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/49 (61%), Positives = 34/49 (69%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV A+ TA AGAIT+LLTDR NTSF+DPAGGGDPI
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPI 229
Score = 56.4 bits (130), Expect = 6e-07
Identities = 37/99 (37%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 178
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 179 XXXXXXXXXN*LVPLILGAPDIAFPQ*II*DFDSYPPPL 295
N LVP+++GAPD+AFP+ F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 69.3 bits (162), Expect = 7e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 430 ISS 438
ISS
Sbjct: 155 ISS 157
Score = 62.5 bits (145), Expect = 9e-09
Identities = 30/49 (61%), Positives = 34/49 (69%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV A+ TA AGAIT+LLTDR NTSF+DPAGGGDPI
Sbjct: 181 LPLFVWAIFVTAILLLLSLPVLAGAITMLLTDRNFNTSFYDPAGGGDPI 229
Score = 56.4 bits (130), Expect = 6e-07
Identities = 37/99 (37%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 178
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 179 XXXXXXXXXN*LVPLILGAPDIAFPQ*II*DFDSYPPPL 295
N LVP+++GAPD+AFP+ F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 69.3 bits (162), Expect = 7e-11
Identities = 36/63 (57%), Positives = 39/63 (61%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NNI F VE GAGTG TVYPPLS +H G SVDLAIFSLHL+G
Sbjct: 95 PRLNNISFWLLPPSLILLLASAFVEQGAGTGWTVYPPLSGLQSHSGGSVDLAIFSLHLSG 154
Query: 430 ISS 438
ISS
Sbjct: 155 ISS 157
Score = 56.4 bits (130), Expect = 6e-07
Identities = 37/99 (37%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 178
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 179 XXXXXXXXXN*LVPLILGAPDIAFPQ*II*DFDSYPPPL 295
N LVP+++GAPD+AFP+ F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 68.9 bits (161), Expect = 1e-10
Identities = 37/63 (58%), Positives = 40/63 (63%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P IN+I F +VE+GAGTG TVYPPLSS AH G SVDLAIFSLHL
Sbjct: 96 PRINSIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLSSIQAHSGPSVDLAIFSLHLTS 155
Query: 430 ISS 438
ISS
Sbjct: 156 ISS 158
Score = 52.8 bits (121), Expect = 7e-06
Identities = 26/49 (53%), Positives = 31/49 (63%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV A+ TAF + IT+LL DR NTSFF+ AGGGDPI
Sbjct: 182 MPLFVWAIFITAFLLLLSLPVLSAGITMLLMDRNFNTSFFEVAGGGDPI 230
Score = 39.9 bits (89), Expect = 0.052
Identities = 24/86 (27%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 178
KDI +Y EL PGS L G+ Q++N +V HA
Sbjct: 12 KDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHAVLMIFFLA 71
Query: 179 XXXXXXXXXN*LVPLILGAPDIAFPQ 256
N ++PL++GA D++FP+
Sbjct: 72 MPALIGGFGNYMLPLMIGATDMSFPR 97
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 68.1 bits (159), Expect = 2e-10
Identities = 55/181 (30%), Positives = 73/181 (40%), Gaps = 1/181 (0%)
Frame = +2
Query: 86 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ*II 265
ELG PGSL+ DDQ+YN +VTAH N LVPL+LGAPD+AFP+
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGFIMIFFMVMPIMIGGFGNWLVPLMLGAPDMAFPRMNN 83
Query: 266 *DFDSYPPPLYY*FQEEL*KMVQEQDEQFTPHFHLISHIEEDP*ILLFFHYI*QVFXXXX 445
F +P +Y + K +DE TP + + + +F ++ V
Sbjct: 84 MSFGFFPLHWHY-YSFFTVKGGLARDELSTPLYLVTISAGPSVDLAIFPLHLAGVSSILG 142
Query: 446 XXXXXXXXXXXXXXXXXXXXNTLICMSCRXYSXXXXXXTTCFSWXYYNIINRS-XLKYII 622
T IC+ Y TC S YY IIN L YII
Sbjct: 143 SYWLYYNNSLYTVSSSSNGTTTFICLISVYYRYPSTPFFTCTSSSYYYIINSPLLLHYII 202
Query: 623 F 625
+
Sbjct: 203 W 203
Score = 33.1 bits (72), Expect = 6.0
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 385 GRSVDLAIFSLHLAGISS 438
G SVDLAIF LHLAG+SS
Sbjct: 122 GPSVDLAIFPLHLAGVSS 139
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 67.7 bits (158), Expect = 2e-10
Identities = 35/63 (55%), Positives = 40/63 (63%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P INNI F +VE+GAGTG TVYPPL+S AH G SVDLAIF+LH+
Sbjct: 96 PRINNIGFWLLPMGLVCLVTSTLVESGAGTGWTVYPPLASIQAHSGPSVDLAIFALHMTS 155
Query: 430 ISS 438
ISS
Sbjct: 156 ISS 158
Score = 49.6 bits (113), Expect = 6e-05
Identities = 24/49 (48%), Positives = 30/49 (61%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV A+ TA + +T+LL DR NTSFF+ AGGGDPI
Sbjct: 182 LPLFVWAILITAVLLLLTLPVLSAGVTMLLLDRNFNTSFFEVAGGGDPI 230
Score = 40.3 bits (90), Expect = 0.039
Identities = 25/86 (29%), Positives = 35/86 (40%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 178
KDI LY EL PG L G++Q++N +V HA
Sbjct: 12 KDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHAILMIFFMV 71
Query: 179 XXXXXXXXXN*LVPLILGAPDIAFPQ 256
N ++PL++GA D AFP+
Sbjct: 72 MPALIGGFGNYMLPLMIGATDTAFPR 97
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 66.9 bits (156), Expect = 4e-10
Identities = 33/63 (52%), Positives = 40/63 (63%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NNI F +VE G+GTG TVYPPLS +H G +VDLAIFSLHL+G
Sbjct: 98 PRLNNISFWLLPPSLLLLLSSALVEVGSGTGWTVYPPLSGITSHSGGAVDLAIFSLHLSG 157
Query: 430 ISS 438
+SS
Sbjct: 158 VSS 160
Score = 63.7 bits (148), Expect = 4e-09
Identities = 31/49 (63%), Positives = 35/49 (71%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV +V TAF AGAIT+LLTDR NT+FFDPAGGGDPI
Sbjct: 184 LPLFVWSVLVTAFLLLLSLPVLAGAITMLLTDRNFNTTFFDPAGGGDPI 232
Score = 54.8 bits (126), Expect = 2e-06
Identities = 34/99 (34%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXX 178
KDIGTLY EL PG I G+ Q+YN ++TAHA
Sbjct: 14 KDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAFLMIFFMV 73
Query: 179 XXXXXXXXXN*LVPLILGAPDIAFPQ*II*DFDSYPPPL 295
N VP+++GAPD+AFP+ F PP L
Sbjct: 74 MPAMIGGFGNWFVPILIGAPDMAFPRLNNISFWLLPPSL 112
>UniRef50_Q9MLW1 Cluster: Cytochrome c oxidase subunit I; n=5;
Naupactini|Rep: Cytochrome c oxidase subunit I -
Galapaganus collaris
Length = 406
Score = 66.5 bits (155), Expect = 5e-10
Identities = 31/40 (77%), Positives = 34/40 (85%)
Frame = +1
Query: 319 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 438
VE GAGTG TV PPLS+NIAH G SVDLAIFSLH+AG+ S
Sbjct: 37 VEKGAGTGWTVSPPLSANIAHEGSSVDLAIFSLHMAGVXS 76
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/49 (65%), Positives = 35/49 (71%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV AV TA AGAIT+LLTDR +NTSFFDPAGGGDPI
Sbjct: 100 MPLFVWAVEITAILLLLSLPVLAGAITMLLTDRNINTSFFDPAGGGDPI 148
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 64.9 bits (151), Expect = 2e-09
Identities = 33/63 (52%), Positives = 39/63 (61%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NNI F +VE G GTG TVYPPLSS +H G +VDLAIFSLH++G
Sbjct: 103 PRLNNISFWLLPPSLCLLLMSALVEVGVGTGWTVYPPLSSIQSHSGGAVDLAIFSLHISG 162
Query: 430 ISS 438
SS
Sbjct: 163 ASS 165
Score = 60.9 bits (141), Expect = 3e-08
Identities = 30/49 (61%), Positives = 34/49 (69%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
IPLFV ++ TAF AGAIT+LLTDR NTSFFD +GGGDPI
Sbjct: 189 IPLFVWSILVTAFLLLLAVPVLAGAITMLLTDRNFNTSFFDASGGGDPI 237
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/99 (34%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 178
KDIGTLY EL P + L+G+ QIYN ++TAHA
Sbjct: 19 KDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAFLMIFFMV 78
Query: 179 XXXXXXXXXN*LVPLILGAPDIAFPQ*II*DFDSYPPPL 295
N LVP+++G+PD+AFP+ F PP L
Sbjct: 79 MPVMIGGFGNWLVPIMIGSPDMAFPRLNNISFWLLPPSL 117
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 64.1 bits (149), Expect = 3e-09
Identities = 38/84 (45%), Positives = 44/84 (52%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 184
KD GTL AELG PG+L+GDDQ N IVTAHA
Sbjct: 14 KDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAFVMIFXMXMP 73
Query: 185 XXXXXXXN*LVPLILGAPDIAFPQ 256
N LVPL++GAPD+AFP+
Sbjct: 74 IMIGGFGNWLVPLMIGAPDMAFPR 97
Score = 34.3 bits (75), Expect = 2.6
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLS 366
P +NN+ F VE GAGTG TVYPPL+
Sbjct: 96 PRMNNMSFWLLPPSFLLLLASSTVEAGAGTGWTVYPPLA 134
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/63 (50%), Positives = 38/63 (60%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NNI + +ENG GTG T+YPPLS +H G SVDLAIF LHL+G
Sbjct: 96 PRLNNISYLLLIPSIVLFLFAGGIENGVGTGWTLYPPLSGIQSHSGPSVDLAIFGLHLSG 155
Query: 430 ISS 438
ISS
Sbjct: 156 ISS 158
Score = 51.2 bits (117), Expect = 2e-05
Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 181
KDIG LY EL PG I D+Q+YN+I+TAHA
Sbjct: 13 KDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHAIIMIFFMVM 72
Query: 182 XXXXXXXXN*LVPLILGAPDIAFPQ 256
N L+PL LG PD+ FP+
Sbjct: 73 PALIGGFGNFLLPLGLGGPDMGFPR 97
Score = 50.4 bits (115), Expect = 4e-05
Identities = 26/47 (55%), Positives = 29/47 (61%)
Frame = +3
Query: 513 LFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
LF AV TA AG IT++LTDR NTSFF+ AGGGDPI
Sbjct: 184 LFAWAVVITAVLLLLSLPVLAGGITMVLTDRNFNTSFFEVAGGGDPI 230
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = +2
Query: 86 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ 256
ELG PGSLIG+DQIYN+IVT+HA N L+PL+LG+PD++FP+
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAFIMIFFMVMPVMIGGFGNWLIPLMLGSPDMSFPR 80
Score = 60.9 bits (141), Expect = 3e-08
Identities = 31/63 (49%), Positives = 35/63 (55%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NN+ F + G GTG TVYPPLS + H G SVDL IFSLHLAG
Sbjct: 79 PRMNNMSFWLLIPSLLLLILSMFINVGVGTGWTVYPPLSLILGHGGMSVDLGIFSLHLAG 138
Query: 430 ISS 438
SS
Sbjct: 139 ASS 141
Score = 56.4 bits (130), Expect = 6e-07
Identities = 28/47 (59%), Positives = 32/47 (68%)
Frame = +3
Query: 513 LFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
LF +V TA AGAIT+LLTDR +NTSFFDP+GGGDPI
Sbjct: 167 LFSWSVFITAILLLLSLPVLAGAITMLLTDRNMNTSFFDPSGGGDPI 213
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 61.7 bits (143), Expect = 1e-08
Identities = 29/63 (46%), Positives = 36/63 (57%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NN+ + I+ENG GTG T+YPPLS +H VDL IF LHL+G
Sbjct: 122 PRLNNVSYWLLIPSLFLFVFAAIIENGVGTGWTLYPPLSGIQSHSSMGVDLGIFGLHLSG 181
Query: 430 ISS 438
ISS
Sbjct: 182 ISS 184
Score = 47.2 bits (107), Expect = 3e-04
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 181
KDI LY EL PG I D+Q+YN+I+T+H
Sbjct: 39 KDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSHGVIMIFFMVM 98
Query: 182 XXXXXXXXN*LVPLILGAPDIAFPQ 256
N L+P+++G PD+AFP+
Sbjct: 99 PALIGGFGNFLLPILIGGPDMAFPR 123
Score = 46.8 bits (106), Expect = 5e-04
Identities = 26/49 (53%), Positives = 30/49 (61%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+ LF AV TA A AIT+LLTDR LNTSF++ AGGGD I
Sbjct: 208 LALFGWAVVITAVLLLLSLPVLAAAITMLLTDRNLNTSFYELAGGGDAI 256
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 430 ISS 438
+SS
Sbjct: 173 LSS 175
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV +V TA A +T+LL DR NTSFF +GGGDP+
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPL 247
Score = 37.9 bits (84), Expect = 0.21
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 95 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ 256
NP L+ + Q++N ++TAHA N LVPL +G+ D AFP+
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 430 ISS 438
+SS
Sbjct: 173 LSS 175
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV +V TA A +T+LL DR NTSFF +GGGDP+
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPL 247
Score = 37.9 bits (84), Expect = 0.21
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 95 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ 256
NP L+ + Q++N ++TAHA N LVPL +G+ D AFP+
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 430 ISS 438
+SS
Sbjct: 173 LSS 175
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV +V TA A +T+LL DR NTSFF +GGGDP+
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPL 247
Score = 37.9 bits (84), Expect = 0.21
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 95 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ 256
NP L+ + Q++N ++TAHA N LVPL +G+ D AFP+
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P INN+ F +++ G G+G T+YPPL+S +H G S+D+AIF+LHL+G
Sbjct: 113 PRINNLAFVVLLPSMLFAVLSCLIDEGPGSGWTLYPPLTSLQSHSGSSIDMAIFALHLSG 172
Query: 430 ISS 438
+SS
Sbjct: 173 LSS 175
Score = 45.6 bits (103), Expect = 0.001
Identities = 23/49 (46%), Positives = 29/49 (59%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV +V TA A +T+LL DR NTSFF +GGGDP+
Sbjct: 199 LPLFVWSVLITAVLIILALPVLAAGLTMLLMDRNFNTSFFVVSGGGDPL 247
Score = 37.9 bits (84), Expect = 0.21
Identities = 19/54 (35%), Positives = 28/54 (51%)
Frame = +2
Query: 95 NPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ 256
NP L+ + Q++N ++TAHA N LVPL +G+ D AFP+
Sbjct: 61 NPQILMHNGQLWNVLITAHALFMVFYLVMPITMGALANYLVPLQIGSNDTAFPR 114
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Aedes
cretinus|Rep: Cytochrome c oxidase subunit I - Aedes
cretinus
Length = 153
Score = 60.5 bits (140), Expect = 3e-08
Identities = 30/55 (54%), Positives = 34/55 (61%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFS 414
P +NN+ F +VENGAGTG TVYPPLSS AH G SVDLAI+S
Sbjct: 11 PRMNNMSFWMLPPSLTLLLSSSMVENGAGTGWTVYPPLSSGTAHAGASVDLAIYS 65
Score = 39.1 bits (87), Expect = 0.091
Identities = 20/47 (42%), Positives = 21/47 (44%)
Frame = +2
Query: 509 TLICMSCRXYSXXXXXXTTCFSWXYYNIINRSXLKYIIF*SCWRRRP 649
T ICM C Y TCFS +Y IIN KY IF W P
Sbjct: 94 TFICMICCNYCYFITSFFTCFSSSHYYIINWPKSKYFIFWPNWSSSP 140
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 59.3 bits (137), Expect = 8e-08
Identities = 31/63 (49%), Positives = 33/63 (52%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NN F E G GTG TVYPPLSS +H G SVDL IFS HL G
Sbjct: 99 PRLNNFSFWLLPGAILLAVLATYSEGGPGTGWTVYPPLSSLQSHSGASVDLMIFSFHLVG 158
Query: 430 ISS 438
I S
Sbjct: 159 IGS 161
Score = 53.6 bits (123), Expect = 4e-06
Identities = 25/49 (51%), Positives = 31/49 (63%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV +V T+F A AIT+LL DR NTSF+DP GGGD +
Sbjct: 185 LPLFVWSVAVTSFLVIVAIPVLAAAITLLLFDRNFNTSFYDPVGGGDVV 233
Score = 39.5 bits (88), Expect = 0.069
Identities = 25/86 (29%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 178
K IG LY EL PG L G+ YN I T H
Sbjct: 15 KRIGILYLFFGVFNGFLAVLLSMLMRLELAFPGDQILFGEYHFYNMITTVHGVLMLFVVV 74
Query: 179 XXXXXXXXXN*LVPLILGAPDIAFPQ 256
N VP+++GAPD++FP+
Sbjct: 75 MPILFGGFGNYFVPILIGAPDMSFPR 100
>UniRef50_A1XI88 Cluster: Cytochrome c oxidase subunit I; n=1;
Myrmarachne sp. G FSC-2006|Rep: Cytochrome c oxidase
subunit I - Myrmarachne sp. G FSC-2006
Length = 129
Score = 59.3 bits (137), Expect = 8e-08
Identities = 28/41 (68%), Positives = 31/41 (75%)
Frame = +1
Query: 316 IVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 438
+VE G G G TVYPPL+S + H G SVD AIFSLHLAG SS
Sbjct: 12 MVEMGVGAGWTVYPPLASVVGHGGSSVDFAIFSLHLAGASS 52
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 59.3 bits (137), Expect = 8e-08
Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TV----YPPLSSNIAHRGRSVDLAIFSL 417
P +NNI F I+E G GTG T+ YPPLS +H G SVDLAIF+L
Sbjct: 124 PRLNNISFWLLPPSLLLLVFSAIIEGGVGTGWTLLKDKYPPLSGLQSHSGPSVDLAIFAL 183
Query: 418 HLAGISS 438
HL+G+SS
Sbjct: 184 HLSGVSS 190
Score = 55.2 bits (127), Expect = 1e-06
Identities = 34/98 (34%), Positives = 44/98 (44%), Gaps = 1/98 (1%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-SLIGDDQIYNTIVTAHAXXXXXXXXX 181
KDIGTLY EL PG I ++Q+YN+I+TAHA
Sbjct: 41 KDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHAILMIFFMVM 100
Query: 182 XXXXXXXXN*LVPLILGAPDIAFPQ*II*DFDSYPPPL 295
N L+PL++G PD+AFP+ F PP L
Sbjct: 101 PALIGGFGNFLMPLMIGGPDMAFPRLNNISFWLLPPSL 138
Score = 42.7 bits (96), Expect = 0.007
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +3
Query: 582 ITILLTDRXLNTSFFDPAGGGDPI 653
IT++LTDR NTSFF+ AGGGDPI
Sbjct: 232 ITMVLTDRNFNTSFFEVAGGGDPI 255
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 58.4 bits (135), Expect = 1e-07
Identities = 28/49 (57%), Positives = 33/49 (67%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLF +V TA+ AGAIT+LLTDR T+FFDPAGGGDPI
Sbjct: 287 VPLFAWSVFVTAWLLLLSLPVLAGAITMLLTDRNFGTTFFDPAGGGDPI 335
Score = 50.4 bits (115), Expect = 4e-05
Identities = 22/63 (34%), Positives = 35/63 (55%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NN+ + +++ GAG G T YPP+S+ R+VD AIF++H++G
Sbjct: 201 PRLNNLSYWMYVAGTCLAFCSVMIDGGAGPGWTFYPPISAQGVETSRAVDFAIFAVHVSG 260
Query: 430 ISS 438
SS
Sbjct: 261 ASS 263
Score = 35.1 bits (77), Expect = 1.5
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 83 AELGNPGSLIG--DDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ 256
A LG L G D ++N ++T H N +PL++GAPD+AFP+
Sbjct: 143 ALLGTMDQLDGNPDGHLWNVLITGHGVLMMFFVVIPALFGGFGNYFMPLMIGAPDMAFPR 202
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 58.4 bits (135), Expect = 1e-07
Identities = 31/61 (50%), Positives = 37/61 (60%)
Frame = +1
Query: 256 INNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGIS 435
+NNI F +VE GAGTG TVY PL+ +H G +VDLAIFSLHL+G S
Sbjct: 103 LNNISFWLLVPSLILILTSALVEAGAGTGWTVYFPLAGIQSHSGPAVDLAIFSLHLSGFS 162
Query: 436 S 438
S
Sbjct: 163 S 163
Score = 42.7 bits (96), Expect = 0.007
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 178
KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 179 XXXXXXXXXN*LVPLILGAPDIAF 250
N L+PL+LGA D+AF
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMAF 100
Score = 41.9 bits (94), Expect = 0.013
Identities = 21/50 (42%), Positives = 28/50 (56%)
Frame = +3
Query: 504 SIPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
++PLF AV TA A +T+ + DR NTSFF+ AGGGD +
Sbjct: 186 NVPLFAWAVLFTAILLLLSLPVLAAGLTMGIFDRNFNTSFFEYAGGGDAV 235
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 56.4 bits (130), Expect = 6e-07
Identities = 37/99 (37%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 178
KDIGTLY EL PG L GD Q+YN I+TAHA
Sbjct: 11 KDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAFVMIFFMV 70
Query: 179 XXXXXXXXXN*LVPLILGAPDIAFPQ*II*DFDSYPPPL 295
N LVP+++GAPD+AFP+ F PP L
Sbjct: 71 MPAMVGGFGNYLVPVMIGAPDMAFPRLNNISFWLLPPSL 109
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 54.0 bits (124), Expect = 3e-06
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLI--GDDQIYNTIVTAHAXXXXXXXX 178
KDIGTLY EL PG+ I G+ Q+YN ++TAHA
Sbjct: 15 KDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLITAHAFLMIFFMV 74
Query: 179 XXXXXXXXXN*LVPLILGAPDIAFPQ*II*DFDSYPPPL 295
N VP+++G+PD+AFP+ F PP L
Sbjct: 75 MPAMIGGFGNWFVPILIGSPDMAFPRLNNISFWLLPPSL 113
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 52.4 bits (120), Expect = 9e-06
Identities = 26/48 (54%), Positives = 31/48 (64%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDP 650
+PLFV +V TAF A AIT+LLTDR T+F+D AGGGDP
Sbjct: 224 MPLFVWSVLVTAFLLLLALPVLAAAITMLLTDRNFGTTFYDAAGGGDP 271
Score = 47.6 bits (108), Expect = 3e-04
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +1
Query: 325 NGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 438
NGAGTG TVY PLS++ G +VD+AI SLH+AG SS
Sbjct: 164 NGAGTGWTVYAPLSTS-GSAGPAVDMAILSLHIAGASS 200
Score = 35.5 bits (78), Expect = 1.1
Identities = 30/100 (30%), Positives = 38/100 (38%), Gaps = 16/100 (16%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPG-------SLIGD------DQIY---NT 136
KDIGTLY AEL PG + D DQ Y N
Sbjct: 37 KDIGTLYLIFAIIAGIIGGAISGLMRAELAEPGIQYLQTWARFSDGPSATLDQAYHLWNV 96
Query: 137 IVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ 256
++TAH N VP+++GAPD+AFP+
Sbjct: 97 LITAHGLIMVFFMVMPAMIGGFGNWFVPIMIGAPDMAFPR 136
>UniRef50_Q8HCX2 Cluster: Cytochrome c oxidase subunit I; n=1;
Aplidium nordmanni|Rep: Cytochrome c oxidase subunit I -
Aplidium nordmanni
Length = 227
Score = 50.4 bits (115), Expect = 4e-05
Identities = 28/63 (44%), Positives = 33/63 (52%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P + N+ F + G G VYPP SS +AH +VDL IF LHLAG
Sbjct: 85 PRLXNMSFWLLPPSLXXLCLSVFIGXGVGXXWXVYPPXSSGLAHSSGAVDLGIFXLHLAG 144
Query: 430 ISS 438
ISS
Sbjct: 145 ISS 147
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 49.2 bits (112), Expect = 9e-05
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NN+ + G G G T+YPPLS++ G +DLA+FSLH+AG
Sbjct: 97 PRLNNLSVWLALGSLFLMCMAFLSSGGLGCGWTMYPPLSNSEFMDGLPIDLAVFSLHMAG 156
Query: 430 ISS 438
+SS
Sbjct: 157 MSS 159
Score = 39.9 bits (89), Expect = 0.052
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = +3
Query: 510 PLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
P+ + + T+ A +T+LL DR +TSF+ P GGGDPI
Sbjct: 185 PMLIWTLFGTSILLVTSVPVLAAGLTLLLLDRHFSTSFYYPEGGGDPI 232
Score = 35.1 bits (77), Expect = 1.5
Identities = 20/84 (23%), Positives = 33/84 (39%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 184
KDIGT+Y EL +PG + +Y++I+T HA
Sbjct: 15 KDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAFMMIFFFVMP 74
Query: 185 XXXXXXXN*LVPLILGAPDIAFPQ 256
N +PL++ D++ P+
Sbjct: 75 TSIGGLGNWFIPLMIKIKDLSMPR 98
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/27 (77%), Positives = 25/27 (92%)
Frame = +1
Query: 358 PLSSNIAHRGRSVDLAIFSLHLAGISS 438
PL+S+IAH G SVD+AIFSLHLAG+SS
Sbjct: 72 PLASSIAHAGASVDMAIFSLHLAGVSS 98
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 44.0 bits (99), Expect = 0.003
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 178
K IGT Y EL +PG G Q+YN+++T H
Sbjct: 22 KTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMHGVLMIFFLV 81
Query: 179 XXXXXXXXXN*LVPLILGAPDIAFPQ 256
N ++PL+LGAP++AFP+
Sbjct: 82 MPILIGGFGNWMLPLMLGAPEMAFPR 107
Score = 38.3 bits (85), Expect = 0.16
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
I +FV T+F AG++ LL DR NTSF+D GG+P+
Sbjct: 191 ISMFVWTSYLTSFLLVLSVPVLAGSLLFLLLDRNFNTSFYDTKKGGNPL 239
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 42.7 bits (96), Expect = 0.007
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 2/84 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 178
KDI LY EL N GS L G+ Q +N ++TAHA
Sbjct: 17 KDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHAILMIFFFV 76
Query: 179 XXXXXXXXXN*LVPLILGAPDIAF 250
N L+PL+LGA D+AF
Sbjct: 77 MPALVGGFGNYLMPLMLGASDMAF 100
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 42.7 bits (96), Expect = 0.007
Identities = 21/47 (44%), Positives = 26/47 (55%)
Frame = +3
Query: 513 LFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
LF+ A TA AG +T++L DR NTSF+D GGGD I
Sbjct: 186 LFIWAALITAILLIITLPVLAGGVTLILCDRNFNTSFYDVVGGGDLI 232
Score = 41.5 bits (93), Expect = 0.017
Identities = 21/63 (33%), Positives = 29/63 (46%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAG 429
P +NN+ F + E G G G T+YP L H + D +F++HL G
Sbjct: 98 PRLNNMSFWMYLAGFGCVVNGFLTEEGMGVGWTLYPTLICIDFHSSLACDFVMFAVHLLG 157
Query: 430 ISS 438
ISS
Sbjct: 158 ISS 160
Score = 37.1 bits (82), Expect = 0.37
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +2
Query: 101 GSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ 256
G L GD Q YN ++T+H N +P++ G PD+ FP+
Sbjct: 48 GILFGDYQFYNVLITSHGLIMVFAFIMPVMMGGLVNYFIPVMAGFPDMVFPR 99
>UniRef50_Q7YI87 Cluster: Cytochrome oxidase subunit I; n=1;
Celatoblatta vulgaris|Rep: Cytochrome oxidase subunit I
- Celatoblatta vulgaris
Length = 134
Score = 41.9 bits (94), Expect = 0.013
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +2
Query: 521 MSCRXYSXXXXXXTTCFSWXYYNIINRSXLKYIIF 625
M C YS +TC W YYN IN S LKYI+F
Sbjct: 84 MICSNYSFTIIIVSTCSCWSYYNTINWSKLKYILF 118
>UniRef50_Q9B8X8 Cluster: Cytochrome c oxidase subunit I; n=517;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Schistosoma mansoni (Blood fluke)
Length = 609
Score = 41.5 bits (93), Expect = 0.017
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +3
Query: 573 AGAITILLTDRXLNTSFFDPAGGGDPI 653
A IT+LL DR T+FF+P+GGGDPI
Sbjct: 293 ASGITMLLFDRNFGTAFFEPSGGGDPI 319
Score = 39.1 bits (87), Expect = 0.091
Identities = 21/37 (56%), Positives = 24/37 (64%)
Frame = +1
Query: 328 GAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 438
G G G T+YPPLS G VD +FSLHLAG+SS
Sbjct: 217 GCGIGWTLYPPLSI-WEGSGFGVDYLMFSLHLAGVSS 252
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 41.5 bits (93), Expect = 0.017
Identities = 24/84 (28%), Positives = 36/84 (42%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXX 184
KDIG LY EL +PG + + YN+++T+H
Sbjct: 95 KDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSHGITMLFLFATP 154
Query: 185 XXXXXXXN*LVPLILGAPDIAFPQ 256
N L+PL++GA D+AFP+
Sbjct: 155 IIAAFS-NYLIPLLIGADDMAFPR 177
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 41.1 bits (92), Expect = 0.023
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +3
Query: 573 AGAITILLTDRXLNTSFFDPAGGGDPI 653
AGA+T+L D+ L T+FF+PA GGDP+
Sbjct: 159 AGAVTMLFLDKYLGTNFFNPAKGGDPL 185
Score = 36.3 bits (80), Expect = 0.64
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 98 PGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ 256
PG + D + YN ++T H N L+PL++GA D+AFP+
Sbjct: 2 PGMQVVDFKTYNYLLTGHGVGMLFWWAIAAHIGGFGNFLLPLMIGAKDVAFPR 54
>UniRef50_Q36097 Cluster: Cytochrome c oxidase subunit 1; n=3;
Theileria|Rep: Cytochrome c oxidase subunit 1 -
Theileria parva
Length = 481
Score = 40.7 bits (91), Expect = 0.030
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +1
Query: 319 VENGAGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 438
+E G+GTG T+YPPLS+++++ G +D IF L AGI+S
Sbjct: 126 LEIGSGTGWTLYPPLSTSLSNVG--IDFIIFGLLAAGIAS 163
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 39.5 bits (88), Expect = 0.069
Identities = 20/50 (40%), Positives = 27/50 (54%)
Frame = +3
Query: 504 SIPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
S+PLF A+ T+ A A+ +L D TSFF+P GGGDP+
Sbjct: 191 SMPLFCWAMLATSSLILLSTPVLASALILLSFDLIAGTSFFNPVGGGDPV 240
>UniRef50_Q02766 Cluster: Cytochrome c oxidase subunit 1; n=107;
Alveolata|Rep: Cytochrome c oxidase subunit 1 -
Plasmodium falciparum
Length = 476
Score = 38.7 bits (86), Expect = 0.12
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +1
Query: 250 PTINNIRFXXXXXXXXXXXXXXIVENGAGTG*TVYPPLSSNIAHRGR-SVDLAIFSLHLA 426
P IN+I E G GTG T+YPPLS+++ +VD+ IF L ++
Sbjct: 100 PRINSISLLLQPIAFVLVILSTAAEFGGGTGWTLYPPLSTSLMSLSPVAVDVIIFGLLVS 159
Query: 427 GISS 438
G++S
Sbjct: 160 GVAS 163
Score = 34.3 bits (75), Expect = 2.6
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +3
Query: 576 GAITILLTDRXLNTSFFDPAGGGDPI 653
G + +LL+D NT FFDP GDPI
Sbjct: 210 GGVLMLLSDLHFNTLFFDPTFAGDPI 235
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 37.1 bits (82), Expect = 0.37
Identities = 20/57 (35%), Positives = 25/57 (43%)
Frame = +2
Query: 86 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ 256
EL PG I D YN T H N ++PL+LGA D+AFP+
Sbjct: 70 ELLTPGPTIMDAMTYNRTFTLHGLVMIFLFMIPAIPAVFGNFMLPLMLGAKDVAFPR 126
>UniRef50_A7H8L4 Cluster: Cytochrome c oxidase subunit I type; n=38;
Bacteria|Rep: Cytochrome c oxidase subunit I type -
Anaeromyxobacter sp. Fw109-5
Length = 555
Score = 37.1 bits (82), Expect = 0.37
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +2
Query: 86 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ 256
EL PG I D YN + T H N L+P+++GA D+AFP+
Sbjct: 63 ELLTPGPTIMDAMTYNRMFTLHGVVMIFLFMIPAIPSGFGNFLLPIMIGAKDVAFPK 119
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 37.1 bits (82), Expect = 0.37
Identities = 28/99 (28%), Positives = 39/99 (39%), Gaps = 2/99 (2%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGS--LIGDDQIYNTIVTAHAXXXXXXXX 178
KDI LY EL PG+ L G+ Q++N +V HA
Sbjct: 12 KDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHAVLMIFFLV 71
Query: 179 XXXXXXXXXN*LVPLILGAPDIAFPQ*II*DFDSYPPPL 295
N L+PL++GA D++F + F PP L
Sbjct: 72 MPALIGGFGNYLLPLMIGASDMSFARLNNISFWLLPPAL 110
>UniRef50_Q98P35 Cluster: Cytochrome C oxidase subunit I; n=16;
cellular organisms|Rep: Cytochrome C oxidase subunit I -
Rhizobium loti (Mesorhizobium loti)
Length = 623
Score = 36.7 bits (81), Expect = 0.49
Identities = 20/47 (42%), Positives = 26/47 (55%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGD 647
IPLFV ++ T+F A T L+ DR + T FF+PA GGD
Sbjct: 197 IPLFVWSMLVTSFLVILAMPAIMIASTSLILDRLVGTHFFNPAEGGD 243
>UniRef50_Q9XKD7 Cluster: Cytochrome c oxidase subunit I; n=1;
Dicyema misakiense|Rep: Cytochrome c oxidase subunit I -
Dicyema misakiense
Length = 473
Score = 36.7 bits (81), Expect = 0.49
Identities = 20/36 (55%), Positives = 24/36 (66%)
Frame = +1
Query: 331 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 438
A G T YPPLSS SV+ ++FSLHLAGI+S
Sbjct: 112 ASAGWTFYPPLSS----LSPSVEFSVFSLHLAGIAS 143
Score = 35.5 bits (78), Expect = 1.1
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +3
Query: 504 SIPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
S+ LF ++ + A IT++LTD+ L T F+D GGDP+
Sbjct: 164 SLSLFCWSIVLVSLLLVLSLPVLAVGITLILTDKHLGTCFYDATMGGDPL 213
>UniRef50_Q94WV3 Cluster: Cytochrome oxidase subunit I; n=1;
Pachymerium ferrugineum|Rep: Cytochrome oxidase subunit
I - Pachymerium ferrugineum
Length = 219
Score = 36.7 bits (81), Expect = 0.49
Identities = 22/55 (40%), Positives = 26/55 (47%)
Frame = +3
Query: 255 NK*YKILTPTPLPYIINFKKNCRKWCRNRMNSLPPTFI*YRT*RKIRRSCYFFTT 419
NK +KIL TPL Y N C K C + +NSLP Y T R +F T
Sbjct: 81 NKQFKILIITPLTYTTNSIYGCSKRCSHSVNSLPAPCCKYLTLGPFRSYNHFCPT 135
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 35.1 bits (77), Expect = 1.5
Identities = 16/27 (59%), Positives = 20/27 (74%)
Frame = +3
Query: 573 AGAITILLTDRXLNTSFFDPAGGGDPI 653
A A+ +LLTDR + FF+PA GGDPI
Sbjct: 205 AAALLMLLTDRLGVSGFFNPAVGGDPI 231
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 34.7 bits (76), Expect = 2.0
Identities = 23/85 (27%), Positives = 31/85 (36%), Gaps = 1/85 (1%)
Frame = +2
Query: 5 KDIGTLYXXXXXXXXXXXXXXXXXXXAELGNPGSLIGDD-QIYNTIVTAHAXXXXXXXXX 181
K +G LY EL G I DD +YNT + H
Sbjct: 15 KRVGILYLIGSIAAFAVAGIMAMLIRLELSQIGPTITDDPSVYNTWLYFHGAAMILAFQI 74
Query: 182 XXXXXXXXN*LVPLILGAPDIAFPQ 256
N +PL++GA D+AFP+
Sbjct: 75 PALTGFFANYFIPLMIGAKDVAFPR 99
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 33.9 bits (74), Expect = 3.4
Identities = 14/26 (53%), Positives = 16/26 (61%)
Frame = +3
Query: 576 GAITILLTDRXLNTSFFDPAGGGDPI 653
G +LL D TSFF P GGGDP+
Sbjct: 230 GGAVMLLFDLSFGTSFFRPEGGGDPV 255
Score = 32.7 bits (71), Expect = 7.9
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +2
Query: 86 ELGNPGSLIGDDQIYNTIVTAHAXXXXXXXXXXXXXXXXXN*LVPLILGAPDIAFPQ 256
EL P + + D +YN + T H N L+P ++GAPD+AFP+
Sbjct: 64 ELITPPADLVDPSVYNGLYTMHGTVMLFLFLFPILNGFN-NLLIPTMIGAPDMAFPK 119
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 33.9 bits (74), Expect = 3.4
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = +3
Query: 507 IPLFV*AVGXTAFXXXXXXXXXAGAITILLTDRXLNTSFFDPAGGGDPI 653
+PLFV + A A+ +LL DR L ++FFDP GG +
Sbjct: 200 VPLFVWMMLMQAILIILALPALNSALAMLLIDRWLGSAFFDPTRGGSAV 248
>UniRef50_Q34463 Cluster: Cytochrome oxidase subunit I; n=3; Euglena
gracilis|Rep: Cytochrome oxidase subunit I - Euglena
gracilis
Length = 495
Score = 33.5 bits (73), Expect = 4.5
Identities = 16/35 (45%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +1
Query: 337 TG*TVYPPLSSNIAHR-GRSVDLAIFSLHLAGISS 438
+G T+YPPLS+ A G ++DL++ +H+ GISS
Sbjct: 135 SGWTLYPPLSTRDADNIGVNIDLSLLVVHVLGISS 169
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 32.7 bits (71), Expect = 7.9
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 331 AGTG*TVYPPLSSNIAHRGRSVDLAIFSLHLAGISS 438
AG G T Y PLS+N+ G L + ++ + G+SS
Sbjct: 155 AGAGWTTYTPLSTNVGMPGMGQTLVVAAIFVTGVSS 190
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 32.7 bits (71), Expect = 7.9
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +1
Query: 10 YWNIIFYFWYLIRNNWNIFKTFNS 81
YWNI+F+FWYLI ++ K NS
Sbjct: 348 YWNIMFHFWYLISFISHLAKINNS 371
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 463,533,245
Number of Sequences: 1657284
Number of extensions: 7312706
Number of successful extensions: 15340
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 14643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15291
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 49173558301
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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