Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0874
         (733 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   7.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   7.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   7.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    21   7.8  

>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +1

Query: 406 KEVDDYAGWINNGGMFISRSTVRTQEYLRLHTLGKQW 516
           K V  + G  N    F +R +  TQ+  +L   G++W
Sbjct: 533 KHVRAFLGLCNFYRKFCARYSAATQDLNKLLRKGEKW 569


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 662 SNLDKRTASHRRIDSTVF 609
           SNLDK    HR +D   F
Sbjct: 330 SNLDKDAFIHRTVDDYFF 347


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = +2

Query: 470 FVHKSIYVFILWV 508
           F+  ++++FILWV
Sbjct: 151 FIFDNVWLFILWV 163


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 384 SRISKQFYFQIARSKGP 334
           S IS+ FY+  A S GP
Sbjct: 59  SEISENFYYLPAMSTGP 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,029
Number of Sequences: 336
Number of extensions: 3722
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19571740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)