BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0873
(734 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY137766-1|AAM94344.1| 78|Anopheles gambiae heat shock protein... 124 4e-30
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein. 24 4.2
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr... 23 9.8
AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22... 23 9.8
>AY137766-1|AAM94344.1| 78|Anopheles gambiae heat shock protein 70
protein.
Length = 78
Score = 124 bits (298), Expect = 4e-30
Identities = 58/67 (86%), Positives = 63/67 (94%)
Frame = +2
Query: 509 YFNDSQRQATKDAGTISGLNVLRIINEPTAAAIAYGLDKKGTGERNVLIFDLGGGTFDVS 688
YFNDSQRQATKDAG I+GLNV+RIINEPTAAA+AYGLDK GERNVLIFDLGGGTFDVS
Sbjct: 9 YFNDSQRQATKDAGAIAGLNVMRIINEPTAAALAYGLDKNLKGERNVLIFDLGGGTFDVS 68
Query: 689 ILTIEDG 709
ILTI++G
Sbjct: 69 ILTIDEG 75
>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
Length = 3361
Score = 24.2 bits (50), Expect = 4.2
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = +3
Query: 66 NGKSTRSRNRSGYHVLLRWCLPAREGGDHR--QRPG 167
+GK RS + +++LL P REG H+ Q PG
Sbjct: 1802 DGKYKRSYSYEPHNLLLSNLFPPREGFHHKAVQLPG 1837
>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
protease protein.
Length = 1322
Score = 23.0 bits (47), Expect = 9.8
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 720 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS-RP*AIAAA 595
T+K+ + M T+ PPP ++ +P P + +P + AAA
Sbjct: 572 TTKLSTMMTTTTTTTEPPPIVQVIGLPAPTPRNNYKPSSAAAA 614
>AF117751-1|AAD38337.3| 1322|Anopheles gambiae serine protease 22D
protein.
Length = 1322
Score = 23.0 bits (47), Expect = 9.8
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Frame = -3
Query: 720 TSKIPSSMVRMDTSKVPPPRSKISTFRSPVPFLS-RP*AIAAA 595
T+K+ + M T+ PPP ++ +P P + +P + AAA
Sbjct: 571 TTKLSTMMTTTTTTTEPPPIVQVIGLPAPTPRNNYKPSSAAAA 613
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 832,072
Number of Sequences: 2352
Number of extensions: 18524
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 75260343
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -