Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0872
(750 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0824 - 32243495-32244319,32244449-32244859 57 1e-08
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 55 5e-08
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 52 5e-07
11_01_0767 + 6438648-6438809,6439146-6440000 51 9e-07
01_01_1152 + 9170628-9171899 50 2e-06
11_02_0012 - 7346282-7347136,7347234-7347593 48 1e-05
11_02_0011 - 7337618-7338496,7338596-7338991 47 1e-05
11_02_0014 - 7352619-7352918,7353173-7353418 47 2e-05
11_01_0771 + 6453130-6454488 44 2e-04
04_04_0619 + 26652923-26653267,26653440-26654273 41 0.001
05_06_0044 - 25150322-25151260 41 0.001
11_01_0750 - 6315126-6315896,6316371-6316784 40 0.003
09_04_0752 + 19933604-19934278,19934679-19935387,19936118-199361... 29 3.0
08_01_0906 + 8933230-8933797,8933894-8934543,8937956-8938615,893... 29 3.0
12_01_0053 - 438527-438670,439038-439247,439401-439530,439672-43... 29 5.2
10_02_0112 + 5385660-5385821,5386337-5386876 28 6.9
02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,513... 28 9.1
>01_06_0824 - 32243495-32244319,32244449-32244859
Length = 411
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/76 (39%), Positives = 43/76 (56%)
Frame = +1
Query: 511 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK 690
D + D++ AT AVL NA+YFKG W SKFD R TSD FY+ + P M G ++
Sbjct: 159 DFLPKDAVDRATPAVLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFM-SSGKWQ 217
Query: 691 YGESAVLNAQLIEIPY 738
Y + +++ +PY
Sbjct: 218 Y-IACRAGYKVLRLPY 232
>03_05_0293 +
22849103-22849513,22849670-22849756,22850156-22850284,
22850507-22851262,22853474-22854250
Length = 719
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/76 (34%), Positives = 46/76 (60%)
Frame = +1
Query: 511 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK 690
++ P S++ T VL NA+YFKGAW+ KFD T D +F++ ++++ P M R K
Sbjct: 483 NIATPRSINHNTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGESVQAPFMSTR--KK 540
Query: 691 YGESAVLNAQLIEIPY 738
S+ + +++++PY
Sbjct: 541 QYLSSYDSLKVLKLPY 556
Score = 54.4 bits (125), Expect = 9e-08
Identities = 26/77 (33%), Positives = 45/77 (58%)
Frame = +1
Query: 511 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK 690
+++ P S+ T VL NA+YFKGAW+ KFD T D +F++ K+++ P M K
Sbjct: 231 EILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFHLLDGKSVQAPFM--STSKK 288
Query: 691 YGESAVLNAQLIEIPYK 741
+ N +++++PY+
Sbjct: 289 QYILSYDNLKVLKLPYQ 305
>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
Length = 258
Score = 52.0 bits (119), Expect = 5e-07
Identities = 26/77 (33%), Positives = 44/77 (57%)
Frame = +1
Query: 511 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK 690
+++ P S+ T VL NA+YFKGAW+ KFD T D +F + K++ P M K
Sbjct: 23 EILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLLDGKSVLAPFM--STSKK 80
Query: 691 YGESAVLNAQLIEIPYK 741
S+ + +++++PY+
Sbjct: 81 QYLSSYDSLKVLKLPYQ 97
>11_01_0767 + 6438648-6438809,6439146-6440000
Length = 338
Score = 51.2 bits (117), Expect = 9e-07
Identities = 24/77 (31%), Positives = 44/77 (57%)
Frame = +1
Query: 511 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK 690
+++ P+S S T V+ NAIYFKG W + FD+ T++R+F +++VP M +
Sbjct: 76 EVIKPESQSVDTRHVVGNAIYFKGEWLAPFDKSDTAEREFRRLDGSSVEVPFMQRPSGSY 135
Query: 691 YGESAVLNAQLIEIPYK 741
+ + +++ +PYK
Sbjct: 136 HHVACHDGFRVLRLPYK 152
>01_01_1152 + 9170628-9171899
Length = 423
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/77 (29%), Positives = 40/77 (51%)
Frame = +1
Query: 511 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYK 690
D++ P+S+ S+T VL NA++FKG WS F T F++ ++ P M ++
Sbjct: 177 DVLPPNSVDSSTVVVLANAVHFKGTWSLPFHPSATFHAPFHLLDGGAVRAPFMTTEIPFE 236
Query: 691 YGESAVLNAQLIEIPYK 741
+A +++PYK
Sbjct: 237 RHVAAFPGFTALKLPYK 253
>11_02_0012 - 7346282-7347136,7347234-7347593
Length = 404
Score = 47.6 bits (108), Expect = 1e-05
Identities = 25/59 (42%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 523 PD-SLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYG 696
PD S+ TA VLVNAIYFKG WS+ F T+ F+ ++ P M R D G
Sbjct: 145 PDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFMSSREDQYIG 203
>11_02_0011 - 7337618-7338496,7338596-7338991
Length = 424
Score = 47.2 bits (107), Expect = 1e-05
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 523 PD-SLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYG 696
PD S+ TA VLVNAIYFKG WS+ F T+ F+ ++ VP M R D G
Sbjct: 157 PDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSVDVPFMSSREDQYIG 215
>11_02_0014 - 7352619-7352918,7353173-7353418
Length = 181
Score = 46.8 bits (106), Expect = 2e-05
Identities = 28/75 (37%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 523 PD-SLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYGE 699
PD S+ T VLVNAIYFKG WS F T+ F+ ++ V M R D G
Sbjct: 107 PDGSVHRLTTLVLVNAIYFKGKWSDPFPRESTTTGKFHRLDGSSVNVRFMRSREDQYIGF 166
Query: 700 SAVLNAQLIEIPYKG 744
N ++++PY G
Sbjct: 167 YDGFN--VLKLPYNG 179
>11_01_0771 + 6453130-6454488
Length = 452
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +1
Query: 511 DLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFY 633
D++ P S+ TA VL NAIYFKG W F+E T + FY
Sbjct: 191 DVLPPRSVGPETAVVLGNAIYFKGKWDRPFNESDTERKPFY 231
>04_04_0619 + 26652923-26653267,26653440-26654273
Length = 392
Score = 41.1 bits (92), Expect = 0.001
Identities = 20/75 (26%), Positives = 36/75 (48%)
Frame = +1
Query: 517 VNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKYG 696
++P + S+T VL NA++FK W KF+ T R F+ + VP + +
Sbjct: 139 ISPGTFGSSTKCVLANAMHFKATWGRKFESYDTQRRRFHRQDGTRVTVPFLSDPRTHYAA 198
Query: 697 ESAVLNAQLIEIPYK 741
L +++++ YK
Sbjct: 199 RFDGLGFKVLQLFYK 213
>05_06_0044 - 25150322-25151260
Length = 312
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/43 (37%), Positives = 24/43 (55%)
Frame = +1
Query: 541 ATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 669
+ + L N++YF W F LT + DF+VS D ++VP M
Sbjct: 75 SASVFLANSLYFNAYWDHPFFPHLTEEGDFHVSPDHDVRVPFM 117
>11_01_0750 - 6315126-6315896,6316371-6316784
Length = 394
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/76 (28%), Positives = 41/76 (53%)
Frame = +1
Query: 514 LVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYKY 693
L+ ++ T VL +A+YF+G W + D R T+++ FY +++VP + D
Sbjct: 161 LLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVP--FVEYDRTR 218
Query: 694 GESAVLNAQLIEIPYK 741
+ N ++I++PYK
Sbjct: 219 LFAVHDNFKVIKLPYK 234
>09_04_0752 +
19933604-19934278,19934679-19935387,19936118-19936161,
19936607-19936704,19937056-19937160,19937694-19937757,
19938316-19938885
Length = 754
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = -1
Query: 324 LIDRRSRLLLANSVRIASSSGKPKLSKA 241
LIDRR RLL NS A++SGK + A
Sbjct: 643 LIDRRRRLLEVNSAVAAAASGKDDIDAA 670
>08_01_0906 +
8933230-8933797,8933894-8934543,8937956-8938615,
8939751-8939817,8940421-8940724,8942993-8942996,
8944539-8946449
Length = 1387
Score = 29.5 bits (63), Expect = 3.0
Identities = 12/42 (28%), Positives = 28/42 (66%)
Frame = +2
Query: 266 DDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENF 391
+++++ A+K+ ++ ++KG+E+ A K++ G LDE+F
Sbjct: 594 NEESVANYCATKNNNVWNVKGLEVTGAIKLFDQRWGNLDEDF 635
>12_01_0053 -
438527-438670,439038-439247,439401-439530,439672-439842,
440233-440355,440439-440543,440656-441332,441498-441604,
441970-442177,442178-442245,444209-444411,444580-444663,
444780-445109,445238-445438,445667-445744,446236-446306
Length = 969
Score = 28.7 bits (61), Expect = 5.2
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +2
Query: 284 TEFASKSRDLRSIKGVELKMANKVYVHDG 370
T+ S S+D++ ++ VE + N VHDG
Sbjct: 520 TQIPSASKDIKEVRAVEEFLPNDFVVHDG 548
>10_02_0112 + 5385660-5385821,5386337-5386876
Length = 233
Score = 28.3 bits (60), Expect = 6.9
Identities = 22/88 (25%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +3
Query: 33 ICLFTIAIAAMAAVTNLSNVLKNGNDNF--TARMFTEVVKNNPGKSIVLSAFSVLPPLAQ 206
+CL T+ + + ++ +S++LK G +NF ++ + VV+ P K + +F L +
Sbjct: 43 MCLSTLRYLSSSLLSRVSHLLKVGRNNFRPPPKVDSSVVRIEPRKPLPPVSFKEWDGLVR 102
Query: 207 LALASDGETHEELLKASASLTTMLYEQN 290
L +T + K L L E+N
Sbjct: 103 LCFNRKNKTLGAIFKQKRVLE--LLEKN 128
>02_01_0689 + 5137506-5137591,5138641-5138709,5139489-5139580,
5139967-5140289,5141373-5142479,5142593-5143279,
5144214-5144522,5145488-5145823,5146165-5146263,
5146676-5146940,5146950-5147104,5147666-5149723,
5150168-5150367,5150662-5150718,5150965-5151079
Length = 1985
Score = 27.9 bits (59), Expect = 9.1
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 309 SRLLLANSVRIASSSGKPKLSKALHGFHHQKLKLTEREEAAPK 181
+RLL N + SS +P + + H QK+ L + E A P+
Sbjct: 1792 TRLLAVNGGLVPESSLRPLIGRNSHILKQQKINLLDIEAALPE 1834
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,973,579
Number of Sequences: 37544
Number of extensions: 373528
Number of successful extensions: 1019
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1992480932
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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