Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0869
(638 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.037
SB_26408| Best HMM Match : Lipase (HMM E-Value=0) 34 0.11
SB_42686| Best HMM Match : Pkinase (HMM E-Value=0) 29 2.4
SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.4
SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41) 29 3.2
SB_36671| Best HMM Match : IBB (HMM E-Value=2.8) 29 3.2
SB_31862| Best HMM Match : E7 (HMM E-Value=4.4) 29 3.2
SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25) 29 4.2
SB_5169| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.4
SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
SB_44102| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.7
>SB_30050| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 35.5 bits (78), Expect = 0.037
Identities = 21/78 (26%), Positives = 35/78 (44%)
Frame = +1
Query: 265 CYDIYGCFSKAYPWTEHRPDNYFPASVESMAIRYPTFTRRNREIPVLLXAXNTDRIXNAX 444
CY YGCFS A P++ RP PA + + FTR + + V + + ++ +
Sbjct: 41 CYGKYGCFSDASPFS--RPFVPLPAPPSKVGTSFQLFTRSHPHL-VSIDDSDVKKLKAST 97
Query: 445 LXXNGPXYXISHGFXXGG 498
+ I+HG+ G
Sbjct: 98 YDGKKRTFVIAHGYTESG 115
>SB_26408| Best HMM Match : Lipase (HMM E-Value=0)
Length = 714
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/35 (40%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +1
Query: 265 CYDIYGCFSKAYPWT-EHRPDNYFPASVESMAIRY 366
CYD+YGCFS +P+ ++ P PAS+ + + Y
Sbjct: 44 CYDVYGCFSNDHPFNRKYVPLPESPASIHTQFMLY 78
>SB_42686| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 759
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/38 (31%), Positives = 23/38 (60%)
Frame = -2
Query: 250 IITKSCREISDIRRILLLHQEHDGLQHQRCTRSIVHHP 137
I + ++++ +R+L LH ++G++H R I HHP
Sbjct: 255 INAEDAKQVTSHQRVLKLHHGNEGIRH---NRDIKHHP 289
>SB_19823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 940
Score = 29.5 bits (63), Expect = 2.4
Identities = 19/74 (25%), Positives = 30/74 (40%)
Frame = +1
Query: 265 CYDIYGCFSKAYPWTEHRPDNYFPASVESMAIRYPTFTRRNREIPVLLXAXNTDRIXNAX 444
CY YGCF P+ +RP P + + + FTR N I ++ + ++ +
Sbjct: 457 CYPKYGCFHDNPPF--NRPLVPLPHPPDRVGTNFRLFTRSNPLISNVIDDSDVSKLQASR 514
Query: 445 LXXNGPXYXISHGF 486
I HGF
Sbjct: 515 YDGKKRTIIIVHGF 528
>SB_40766| Best HMM Match : WD40 (HMM E-Value=1.19993e-41)
Length = 1487
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 241 KSCREISDIRRILLLHQEHDGLQHQRCTRSIVHHP 137
+S +E +D R L LH +H + H RC R +VH P
Sbjct: 801 RSDQEEADTR--LFLHAKHASINHPRC-RIVVHSP 832
>SB_36671| Best HMM Match : IBB (HMM E-Value=2.8)
Length = 1080
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 241 KSCREISDIRRILLLHQEHDGLQHQRCTRSIVHHP 137
+S +E +D R L LH +H + H RC R +VH P
Sbjct: 968 RSDQEEADTR--LFLHAKHASINHPRC-RIVVHSP 999
>SB_31862| Best HMM Match : E7 (HMM E-Value=4.4)
Length = 584
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 241 KSCREISDIRRILLLHQEHDGLQHQRCTRSIVHHP 137
+S +E +D R L LH +H + H RC R +VH P
Sbjct: 325 RSDQEEADTR--LFLHAKHASINHPRC-RIVVHSP 356
>SB_35802| Best HMM Match : Laminin_EGF (HMM E-Value=0.25)
Length = 781
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = -2
Query: 241 KSCREISDIRRILLLHQEHDGLQHQRCTRSIVHHP 137
+S +E +D R L LH +H + H RC R +VH P
Sbjct: 491 RSDQEEADTR--LFLHVKHASINHPRC-RIVVHSP 522
>SB_5169| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 345
Score = 27.9 bits (59), Expect = 7.4
Identities = 21/97 (21%), Positives = 37/97 (38%)
Frame = -3
Query: 345 DRCREIIIGSVLRPRVGFRKTSVDVITSLQSISSLNPAGKLVTSVEFCFFIKSMMVCSIS 166
+R R II P +G R S+ L++ +S P+ + + C ++ S +
Sbjct: 124 NRQRNNIICKNTSPNIGHRFLSLIDKHFLKTTNSKKPSTETIKISYSCMSNTKQIIDSHN 183
Query: 165 VALVRLYIIPESVLVHTKGTRISKCTCKCHNVCTFRG 55
+++ L I E C C+ N C G
Sbjct: 184 KSIIALSIRTEDAPTSLATANNKACNCRQKNACLLDG 220
>SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/40 (30%), Positives = 19/40 (47%)
Frame = +3
Query: 18 SGQFRIKLRCCRSRETYTRCDICTCTLKFAFLLCVREQIQ 137
+ Q I +R RSR T+ C I C L + + + + Q
Sbjct: 692 TAQGLISIRAYRSRNTFQNCSIVLCGLSLLYAIQLMDHSQ 731
>SB_44102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 27.5 bits (58), Expect = 9.7
Identities = 12/34 (35%), Positives = 25/34 (73%)
Frame = -3
Query: 255 SISSLNPAGKLVTSVEFCFFIKSMMVCSISVALV 154
+I+ ++P+G ++ VE +I++++V S S+ALV
Sbjct: 89 AITGISPSGDWLSLVEKFIWIQTLVVTSFSLALV 122
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,205,366
Number of Sequences: 59808
Number of extensions: 332676
Number of successful extensions: 790
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1608851125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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