Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0869
         (638 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058727-1|AAL13956.1|  540|Drosophila melanogaster LD47264p pro...    43   4e-04
AE014298-829|AAF46110.1|  540|Drosophila melanogaster CG5966-PA ...    43   4e-04
AE014134-2599|AAN10900.1|  303|Drosophila melanogaster CG31828-P...    28   9.3  

>AY058727-1|AAL13956.1|  540|Drosophila melanogaster LD47264p
           protein.
          Length = 540

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 3/128 (2%)
 Frame = +1

Query: 262 RCYDIYGCFSKAYPW-TEHRPDNYFPASVESMAIRYPTFTRRNREIPVLLXAXNTDRIXN 438
           +C+ +YGCF    PW T  R  N  P     +   +   TRR  + P  L   + + +  
Sbjct: 45  KCFGVYGCFPINGPWNTVTRSINVHPQKPSEIEPHFTLHTRRALDQPKYLDLNDPESVQG 104

Query: 439 AXLXXNGPXYXISHGFXXGGHXK*LXI*QMPS*TLTVTXQXQ*S--*XTGVGVPNLPYGQ 612
             +   G  + + HG+   G    +    M    L    + + S       G  + PY Q
Sbjct: 105 MGMNPKGKIFLLVHGYLESGEIPWMW--DMAKALLAHEPEGRASVVLIDWGGGASPPYVQ 162

Query: 613 XVANIRLV 636
            VANIRLV
Sbjct: 163 AVANIRLV 170



 Score = 32.7 bits (71), Expect = 0.43
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 516 NLANALLDIDGNXSATVIIVDWRGGSQPP 602
           ++A ALL  +    A+V+++DW GG+ PP
Sbjct: 131 DMAKALLAHEPEGRASVVLIDWGGGASPP 159


>AE014298-829|AAF46110.1|  540|Drosophila melanogaster CG5966-PA
           protein.
          Length = 540

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 3/128 (2%)
 Frame = +1

Query: 262 RCYDIYGCFSKAYPW-TEHRPDNYFPASVESMAIRYPTFTRRNREIPVLLXAXNTDRIXN 438
           +C+ +YGCF    PW T  R  N  P     +   +   TRR  + P  L   + + +  
Sbjct: 45  KCFGVYGCFPINGPWNTVTRSINVHPQKPSEIEPHFTLHTRRALDQPKYLDLNDPESVQG 104

Query: 439 AXLXXNGPXYXISHGFXXGGHXK*LXI*QMPS*TLTVTXQXQ*S--*XTGVGVPNLPYGQ 612
             +   G  + + HG+   G    +    M    L    + + S       G  + PY Q
Sbjct: 105 MGMNPKGKIFLLVHGYLESGEIPWMW--DMAKALLAHEPEGRASVVLIDWGGGASPPYVQ 162

Query: 613 XVANIRLV 636
            VANIRLV
Sbjct: 163 AVANIRLV 170



 Score = 32.7 bits (71), Expect = 0.43
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +3

Query: 516 NLANALLDIDGNXSATVIIVDWRGGSQPP 602
           ++A ALL  +    A+V+++DW GG+ PP
Sbjct: 131 DMAKALLAHEPEGRASVVLIDWGGGASPP 159


>AE014134-2599|AAN10900.1|  303|Drosophila melanogaster CG31828-PA
           protein.
          Length = 303

 Score = 28.3 bits (60), Expect = 9.3
 Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
 Frame = -3

Query: 252 ISSLNPAGKLVTSVEFCFFIKSMMVCSISVALVRLYIIPESVLVHTKGTRISKCTCKCHN 73
           IS L  AG    S   C+F   M   ++S    RL ++          TR+++ TC CH 
Sbjct: 206 ISVLAVAGATAVSFIICYFSNLMCRTAVSWFPFRLLLLFHGSTRMPNRTRLTQWTC-CHF 264

Query: 72  V--CTFRG 55
              C +RG
Sbjct: 265 CADCVWRG 272


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,060,952
Number of Sequences: 53049
Number of extensions: 480829
Number of successful extensions: 1434
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1432
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2682985500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)