Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0868
(823 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000E49DF3 Cluster: PREDICTED: similar to serine hyd... 149 8e-35
UniRef50_P34896 Cluster: Serine hydroxymethyltransferase, cytoso... 148 2e-34
UniRef50_P34897 Cluster: Serine hydroxymethyltransferase, mitoch... 133 4e-30
UniRef50_Q5IWY0 Cluster: Plastid glycine hydroxymethyltransferas... 132 8e-30
UniRef50_Q5BJF5 Cluster: Serine hydroxymethyltransferase; n=3; E... 130 4e-29
UniRef50_O62585 Cluster: Serine hydroxymethyltransferase, cytoso... 127 3e-28
UniRef50_Q9LM59 Cluster: Serine hydroxymethyltransferase; n=21; ... 120 4e-26
UniRef50_A4SBB9 Cluster: Serine hydroxymethyltransferase; n=11; ... 119 1e-25
UniRef50_Q9U638 Cluster: SHMT; n=5; Aconoidasida|Rep: SHMT - Pla... 108 1e-22
UniRef50_Q23KJ4 Cluster: Serine hydroxymethyltransferase family ... 105 2e-21
UniRef50_A2EAE3 Cluster: Serine hydroxymethyltransferase; n=1; T... 104 2e-21
UniRef50_Q7RQX7 Cluster: Serine hydroxymethyltransferase; n=4; P... 104 3e-21
UniRef50_Q98A81 Cluster: Serine hydroxymethyltransferase 2; n=4;... 89 9e-17
UniRef50_Q89HS7 Cluster: Serine hydroxymethyltransferase; n=2; R... 87 5e-16
UniRef50_Q5CM80 Cluster: Serine hydroxymethyltransferase; n=2; C... 86 1e-15
UniRef50_Q9RYB2 Cluster: Serine hydroxymethyltransferase; n=43; ... 82 2e-14
UniRef50_A0CF19 Cluster: Chromosome undetermined scaffold_174, w... 81 2e-14
UniRef50_Q72IH2 Cluster: Serine hydroxymethyltransferase; n=6; B... 81 4e-14
UniRef50_Q8EWD1 Cluster: Serine hydroxymethyltransferase; n=14; ... 80 8e-14
UniRef50_Q8KC36 Cluster: Serine hydroxymethyltransferase; n=103;... 80 8e-14
UniRef50_A7D249 Cluster: Glycine hydroxymethyltransferase; n=1; ... 79 2e-13
UniRef50_Q9A8J6 Cluster: Serine hydroxymethyltransferase; n=42; ... 77 5e-13
UniRef50_Q9HPY5 Cluster: Serine hydroxymethyltransferase; n=79; ... 76 9e-13
UniRef50_Q8FQR1 Cluster: Serine hydroxymethyltransferase; n=37; ... 74 5e-12
UniRef50_Q183S3 Cluster: Serine hydroxymethyltransferase; n=1; C... 73 7e-12
UniRef50_A6PKY7 Cluster: Serine hydroxymethyltransferase; n=2; B... 73 7e-12
UniRef50_Q11NZ7 Cluster: Serine hydroxymethyltransferase; n=6; B... 72 2e-11
UniRef50_Q62I16 Cluster: Serine hydroxymethyltransferase 1; n=45... 71 3e-11
UniRef50_Q6LHN7 Cluster: Serine hydroxymethyltransferase 2; n=27... 71 4e-11
UniRef50_Q057P9 Cluster: Serine hydroxymethyltransferase; n=3; G... 70 8e-11
UniRef50_Q6G3L3 Cluster: Serine hydroxymethyltransferase; n=163;... 69 2e-10
UniRef50_Q05FV9 Cluster: Serine hydroxymethyltransferase; n=1; C... 66 8e-10
UniRef50_A7R0L6 Cluster: Chromosome undetermined scaffold_311, w... 66 8e-10
UniRef50_Q12RK5 Cluster: Glycine hydroxymethyltransferase; n=2; ... 66 1e-09
UniRef50_Q9PJW0 Cluster: Serine hydroxymethyltransferase; n=8; C... 64 5e-09
UniRef50_Q883D8 Cluster: Serine hydroxymethyltransferase, putati... 62 1e-08
UniRef50_Q8TZ19 Cluster: Serine hydroxymethyltransferase; n=8; E... 59 2e-07
UniRef50_O83349 Cluster: Serine hydroxymethyltransferase; n=18; ... 57 6e-07
UniRef50_Q9UMD0 Cluster: 14 kDa protein; n=2; Homo sapiens|Rep: ... 55 2e-06
UniRef50_Q9TSA5 Cluster: Serine hydroxymethyltransferase; n=1; O... 55 2e-06
UniRef50_Q5CM83 Cluster: Serine hydroxymethyltransferase 2; n=2;... 54 4e-06
UniRef50_O29406 Cluster: Serine hydroxymethyltransferase; n=6; E... 54 6e-06
UniRef50_A0RYP2 Cluster: Glycine/serine hydroxymethyltransferase... 51 4e-05
UniRef50_Q1W396 Cluster: Glycine hydroxymethyltransferase; n=1; ... 48 2e-04
UniRef50_Q8ZYF9 Cluster: Serine hydroxymethyltransferase; n=5; T... 47 5e-04
UniRef50_Q9YAH7 Cluster: Serine hydroxymethyltransferase; n=9; A... 44 0.003
UniRef50_A6TST7 Cluster: Glycine hydroxymethyltransferase; n=1; ... 43 0.011
UniRef50_Q9HI38 Cluster: Serine hydroxymethyltransferase; n=5; T... 42 0.025
UniRef50_Q28QL6 Cluster: Glycine hydroxymethyltransferase; n=7; ... 40 0.057
UniRef50_Q6L0Q9 Cluster: Serine hydroxymethyltransferase; n=1; P... 40 0.075
UniRef50_Q97AK0 Cluster: Serine hydroxymethyltransferase; n=3; T... 38 0.40
UniRef50_Q5DH62 Cluster: SJCHGC03592 protein; n=1; Schistosoma j... 37 0.70
UniRef50_A7BUG6 Cluster: Exodeoxyribonuclease V, beta subunit; n... 35 2.8
UniRef50_A5BGY5 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_A0C8P8 Cluster: Chromosome undetermined scaffold_159, w... 35 2.8
UniRef50_Q6LJK0 Cluster: Hypothetical transposase; n=1; Photobac... 34 3.7
UniRef50_Q6MP91 Cluster: Putative secreted esterase precursor; n... 33 6.5
>UniRef50_UPI0000E49DF3 Cluster: PREDICTED: similar to serine
hydroxymethyltransferase isoform 1; n=4; Coelomata|Rep:
PREDICTED: similar to serine hydroxymethyltransferase
isoform 1 - Strongylocentrotus purpuratus
Length = 496
Score = 149 bits (361), Expect = 8e-35
Identities = 63/84 (75%), Positives = 71/84 (84%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P RYYGG ++ DE+E+L Q R+L A+ LK EEWGVNVQPYSGSPANFAVYTG++ PH
Sbjct: 128 GYPGNRYYGGTQFFDEMELLTQKRALAAFGLKEEEWGVNVQPYSGSPANFAVYTGVIGPH 187
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
GRIMGLDLPDGGHLTHGF TA KK
Sbjct: 188 GRIMGLDLPDGGHLTHGFMTAKKK 211
Score = 126 bits (304), Expect = 7e-28
Identities = 65/103 (63%), Positives = 76/103 (73%), Gaps = 1/103 (0%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SATS+FFESMPY+V+PK+GLIDY+ LA A+LF+P++IIAGMSCY R LDYKRF+EI
Sbjct: 211 KISATSLFFESMPYRVNPKTGLIDYEALAVNARLFRPQMIIAGMSCYPRNLDYKRFKEIA 270
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVT-TNHSLRR 809
+ MAHVSGLVAA PFEYCDIVT T H R
Sbjct: 271 VEN-DAYLLADMAHVSGLVAAGVVANPFEYCDIVTSTTHKTLR 312
Score = 77.8 bits (183), Expect = 3e-13
Identities = 38/63 (60%), Positives = 45/63 (71%)
Frame = +2
Query: 98 NSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGT 277
+ +L E DPE++ II+KEKDRQR GLE+IASENF S VL+ L SCL NKY E P N
Sbjct: 75 HQSLEENDPEMYAIILKEKDRQRKGLELIASENFPSRAVLEALGSCLQNKYCEGYPGNRY 134
Query: 278 MGG 286
GG
Sbjct: 135 YGG 137
>UniRef50_P34896 Cluster: Serine hydroxymethyltransferase,
cytosolic; n=86; root|Rep: Serine
hydroxymethyltransferase, cytosolic - Homo sapiens
(Human)
Length = 483
Score = 148 bits (358), Expect = 2e-34
Identities = 64/84 (76%), Positives = 71/84 (84%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P QRYYGG E+IDE+E L Q R+L+AY+L + WGVNVQPYSGSPANFAVYT +VEPH
Sbjct: 76 GYPGQRYYGGTEFIDELETLCQKRALQAYKLDPQCWGVNVQPYSGSPANFAVYTALVEPH 135
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
GRIMGLDLPDGGHLTHGF T KK
Sbjct: 136 GRIMGLDLPDGGHLTHGFMTDKKK 159
Score = 115 bits (277), Expect = 1e-24
Identities = 60/105 (57%), Positives = 74/105 (70%), Gaps = 2/105 (1%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SATSIFFESMPYKV+P +G I+YD+L E A+LF P+LIIAG SCYSR L+Y R R+I
Sbjct: 159 KISATSIFFESMPYKVNPDTGYINYDQLEENARLFHPKLIIAGTSCYSRNLEYARLRKIA 218
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIV--TTNHSLRRC 812
+ MAH+SGLVAA PFE+C +V TT+ +LR C
Sbjct: 219 DENGAYL-MADMAHISGLVAAGVVPSPFEHCHVVTTTTHKTLRGC 262
Score = 72.9 bits (171), Expect = 9e-12
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = +2
Query: 89 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPI 268
K+L L ++D E+++II KE +RQR GLE+IASENF S VL+ L SCL+NKYSE P
Sbjct: 20 KMLAQPLKDSDVEVYNIIKKESNRQRVGLELIASENFASRAVLEALGSCLNNKYSEGYPG 79
Query: 269 NGTMGGMNIL 298
GG +
Sbjct: 80 QRYYGGTEFI 89
>UniRef50_P34897 Cluster: Serine hydroxymethyltransferase,
mitochondrial precursor; n=160; Eukaryota|Rep: Serine
hydroxymethyltransferase, mitochondrial precursor - Homo
sapiens (Human)
Length = 504
Score = 133 bits (322), Expect = 4e-30
Identities = 56/84 (66%), Positives = 68/84 (80%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +RYYGG E +DEIE+L Q R+LEA+ L +WGVNVQPYSGSPAN AVYT +++PH
Sbjct: 99 GYPGKRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPH 158
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
RIMGLDLPDGGHLTHG+ + K+
Sbjct: 159 DRIMGLDLPDGGHLTHGYMSDVKR 182
Score = 115 bits (277), Expect = 1e-24
Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Frame = +3
Query: 510 SATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREI-RR 686
SATSIFFESMPYK++PK+GLIDY++LA TA+LF+PRLIIAG S Y+R +DY R RE+
Sbjct: 184 SATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDE 243
Query: 687 RKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
K L+ MAH+SGLVAA+ PF++ DIVTT
Sbjct: 244 VKAHLL--ADMAHISGLVAAKVIPSPFKHADIVTT 276
Score = 70.5 bits (165), Expect = 5e-11
Identities = 32/65 (49%), Positives = 46/65 (70%)
Frame = +2
Query: 104 NLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGTMG 283
+L ++DPE+++++ +EKDRQ GLE+IASENF S L+ L SCL+NKYSE P G
Sbjct: 48 SLSDSDPEMWELLQREKDRQCRGLELIASENFCSRAALEALGSCLNNKYSEGYPGKRYYG 107
Query: 284 GMNIL 298
G ++
Sbjct: 108 GAEVV 112
>UniRef50_Q5IWY0 Cluster: Plastid glycine hydroxymethyltransferase;
n=1; Prototheca wickerhamii|Rep: Plastid glycine
hydroxymethyltransferase - Prototheca wickerhamii
Length = 218
Score = 132 bits (320), Expect = 8e-30
Identities = 57/84 (67%), Positives = 67/84 (79%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G+P RYYGGNE+ID+ E L Q R+LEA+ L EWGVNVQP+SGSPANFAVYT ++ PH
Sbjct: 123 GLPGARYYGGNEFIDQAESLCQRRALEAFGLDPAEWGVNVQPHSGSPANFAVYTALLSPH 182
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
RIMGLDLP GGHLTHGF T ++
Sbjct: 183 DRIMGLDLPHGGHLTHGFQTPKRR 206
Score = 65.7 bits (153), Expect = 1e-09
Identities = 34/63 (53%), Positives = 41/63 (65%)
Frame = +2
Query: 98 NSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGT 277
+ +L E DPE+ II KEK RQ GLE+IASENFTS V+ + SC+ NKYSE P
Sbjct: 70 DGSLDEVDPEIASIIRKEKVRQVTGLELIASENFTSRAVMTAVGSCMTNKYSEGLPGARY 129
Query: 278 MGG 286
GG
Sbjct: 130 YGG 132
>UniRef50_Q5BJF5 Cluster: Serine hydroxymethyltransferase; n=3;
Euarchontoglires|Rep: Serine hydroxymethyltransferase -
Homo sapiens (Human)
Length = 480
Score = 130 bits (314), Expect = 4e-29
Identities = 55/80 (68%), Positives = 66/80 (82%)
Frame = +1
Query: 268 QRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPHGRIM 447
QRYYGG E +DEIE+L Q R+LEA+ L +WGVNVQPYSGSPAN AVYT +++PH RIM
Sbjct: 79 QRYYGGAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIM 138
Query: 448 GLDLPDGGHLTHGFFTATKK 507
GLDLPDGGHLTHG+ + K+
Sbjct: 139 GLDLPDGGHLTHGYMSDVKR 158
Score = 115 bits (277), Expect = 1e-24
Identities = 59/95 (62%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Frame = +3
Query: 510 SATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREI-RR 686
SATSIFFESMPYK++PK+GLIDY++LA TA+LF+PRLIIAG S Y+R +DY R RE+
Sbjct: 160 SATSIFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYARLIDYARMREVCDE 219
Query: 687 RKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
K L+ MAH+SGLVAA+ PF++ DIVTT
Sbjct: 220 VKAHLL--ADMAHISGLVAAKVIPSPFKHADIVTT 252
>UniRef50_O62585 Cluster: Serine hydroxymethyltransferase,
cytosolic; n=1; Encephalitozoon cuniculi|Rep: Serine
hydroxymethyltransferase, cytosolic - Encephalitozoon
cuniculi
Length = 460
Score = 127 bits (307), Expect = 3e-28
Identities = 54/84 (64%), Positives = 65/84 (77%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G +RYYGG ++D IE+L Q R+LE + L + WGVNVQPYSGSPANFA+YT +V P
Sbjct: 64 GRVGERYYGGTHWVDRIELLCQKRALELFGLDPDVWGVNVQPYSGSPANFAIYTAVVPPG 123
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
GRIMGLDLP GGHLTHG+ T T+K
Sbjct: 124 GRIMGLDLPSGGHLTHGYKTKTRK 147
Score = 83.0 bits (196), Expect = 8e-15
Identities = 46/103 (44%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SA+S++F+S PY V +GLIDY+ L +T F P ++I G S YSR +DYKR + I
Sbjct: 147 KISASSVYFDSRPYTVG-SNGLIDYEGLEKTFTDFLPHILICGYSAYSRDIDYKRLQSIA 205
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIV--TTNHSLR 806
R + + ++H+S LVA+ PFE+CDIV TT LR
Sbjct: 206 GRNGAFL-FADISHISPLVASGLMNSPFEHCDIVMTTTQKGLR 247
Score = 44.8 bits (101), Expect = 0.003
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +2
Query: 116 ADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSE 256
ADPEL +I E +RQ+ + +IASEN+ ++ S L NKYSE
Sbjct: 17 ADPELHALICGEVERQKKTINLIASENYAHQSAMEACGSVLTNKYSE 63
>UniRef50_Q9LM59 Cluster: Serine hydroxymethyltransferase; n=21;
Eukaryota|Rep: Serine hydroxymethyltransferase -
Arabidopsis thaliana (Mouse-ear cress)
Length = 599
Score = 120 bits (289), Expect = 4e-26
Identities = 52/86 (60%), Positives = 66/86 (76%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
GMP RYY GN+YID+IEIL Q R+L A+ L E+WGVNVQPYS + ANFAV+TG++ P
Sbjct: 192 GMPGARYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMPG 251
Query: 436 GRIMGLDLPDGGHLTHGFFTATKKNL 513
RIMGLD P GGH++HG++T K +
Sbjct: 252 ERIMGLDSPSGGHMSHGYYTPGGKKV 277
Score = 102 bits (244), Expect = 1e-20
Identities = 56/113 (49%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = +3
Query: 474 SHPWFLYCY*KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRC 653
SH ++ K S SIFFES PYKVDP++G IDYDKL E A ++P+++I G S Y R
Sbjct: 266 SHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPKILICGGSSYPRD 325
Query: 654 LDYKRFREIRRRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIV--TTNHSLR 806
++ RFR I K + MA +SGLVAA+ + PF+YCDIV TT+ SLR
Sbjct: 326 WEFPRFRHI-ADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTHKSLR 377
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +2
Query: 98 NSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACP 265
N ++ EADPE+ + + KEK RQ G+E+IASENF V++ L S L NKYSE P
Sbjct: 139 NQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGMP 194
>UniRef50_A4SBB9 Cluster: Serine hydroxymethyltransferase; n=11;
Viridiplantae|Rep: Serine hydroxymethyltransferase -
Ostreococcus lucimarinus CCE9901
Length = 525
Score = 119 bits (286), Expect = 1e-25
Identities = 51/84 (60%), Positives = 63/84 (75%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P RYYGGNE+ID E + Q R+L+A+ L +WGVNVQ SGSPANF VYT +++PH
Sbjct: 113 GYPGARYYGGNEFIDMAESMCQERALKAFNLDPAKWGVNVQSLSGSPANFQVYTALLQPH 172
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
+IM LDLP GGHL+HG+ T TKK
Sbjct: 173 DKIMALDLPHGGHLSHGYQTDTKK 196
Score = 99.5 bits (237), Expect = 9e-20
Identities = 51/96 (53%), Positives = 64/96 (66%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SATSIFF S+PY++D +GLIDYD +TA L +P+LI+AG S Y+R DY R R+I
Sbjct: 196 KISATSIFFTSVPYRLDESTGLIDYDACEKTAALVRPKLIVAGASAYARLYDYPRMRKIA 255
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
I MAH+SGLVAA PF+Y D+VTT
Sbjct: 256 DNS-NAILLADMAHISGLVAAGEVPSPFDYADVVTT 290
Score = 60.5 bits (140), Expect = 5e-08
Identities = 30/66 (45%), Positives = 41/66 (62%)
Frame = +2
Query: 89 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPI 268
+++N + E DPE+ +II +EK RQ GLE+I SENF S V+ + S + NKYSE P
Sbjct: 57 EIINKPIEEVDPEMSEIIEREKARQWKGLELIPSENFVSKSVMDAVGSIMTNKYSEGYPG 116
Query: 269 NGTMGG 286
GG
Sbjct: 117 ARYYGG 122
>UniRef50_Q9U638 Cluster: SHMT; n=5; Aconoidasida|Rep: SHMT -
Plasmodium falciparum
Length = 442
Score = 108 bits (260), Expect = 1e-22
Identities = 48/84 (57%), Positives = 59/84 (70%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P++RYYGGN+Y+D+IE L R+LEA+ + EEWGVNVQP SGS AN +V
Sbjct: 57 GYPHKRYYGGNDYVDKIEELCYKRALEAFNVSEEEWGVNVQPLSGSAANVQALYALVGVK 116
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
G+IMG+ L GGHLTHGFF KK
Sbjct: 117 GKIMGMHLCSGGHLTHGFFDEKKK 140
Score = 66.1 bits (154), Expect = 1e-09
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 1/103 (0%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K S TS FES YK + + G +D + + A F+P++II G + Y R +DYK FREI
Sbjct: 140 KVSITSDLFESKLYKCNSE-GYVDMESVRNLALSFQPKVIICGYTSYPRDIDYKGFREIC 198
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIV-TTNHSLRR 809
+ + ++H+S VA PF Y D+V TT H + R
Sbjct: 199 DEVNAYL-FADISHISSFVACNLLNNPFTYADVVTTTTHKILR 240
Score = 59.3 bits (137), Expect = 1e-07
Identities = 30/69 (43%), Positives = 41/69 (59%)
Frame = +2
Query: 98 NSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGT 277
N L + D ELFD++ KEK+RQ + +IASEN T+ V +CL + NKYSE P
Sbjct: 4 NDPLQKYDKELFDLLEKEKNRQIETINLIASENLTNTAVRECLGDRISNKYSEGYPHKRY 63
Query: 278 MGGMNILMK 304
GG + + K
Sbjct: 64 YGGNDYVDK 72
>UniRef50_Q23KJ4 Cluster: Serine hydroxymethyltransferase family
protein; n=1; Tetrahymena thermophila SB210|Rep: Serine
hydroxymethyltransferase family protein - Tetrahymena
thermophila SB210
Length = 515
Score = 105 bits (251), Expect = 2e-21
Identities = 43/77 (55%), Positives = 59/77 (76%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G+P RYYGGN++ID++EIL QNR+LE + L EWG+NVQ +S +PANF V TG+++ H
Sbjct: 111 GLPLNRYYGGNQFIDKMEILCQNRALELFGLNPSEWGINVQAHSLTPANFHVLTGLLQNH 170
Query: 436 GRIMGLDLPDGGHLTHG 486
R+M L + GGHL+HG
Sbjct: 171 DRVMSLSIEHGGHLSHG 187
Score = 87.0 bits (206), Expect = 5e-16
Identities = 48/103 (46%), Positives = 66/103 (64%), Gaps = 2/103 (1%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SA S++FE + Y ++ KSGLIDYDKL E +K F P++I G YSR +DY+R R+I
Sbjct: 194 KLSAGSVYFEILNYGINEKSGLIDYDKLEEQSKYFLPKVIFGGADLYSRKIDYERLRKIC 253
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVT--TNHSLR 806
+ + + VSGLVA + +PF+Y DIVT T+ SLR
Sbjct: 254 DSIGATL-VVDLGQVSGLVATKILPDPFKYADIVTSATHKSLR 295
Score = 64.1 bits (149), Expect = 4e-09
Identities = 30/70 (42%), Positives = 45/70 (64%)
Frame = +2
Query: 95 LNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPING 274
LN + EADP+L +II KE RQ++ + +I SEN+TS+ Q + S +++KYSE P+N
Sbjct: 57 LNQGIKEADPQLNEIIQKEIQRQKSTINLIPSENYTSLSAKQAVGSIMNSKYSEGLPLNR 116
Query: 275 TMGGMNILMK 304
GG + K
Sbjct: 117 YYGGNQFIDK 126
>UniRef50_A2EAE3 Cluster: Serine hydroxymethyltransferase; n=1;
Trichomonas vaginalis G3|Rep: Serine
hydroxymethyltransferase - Trichomonas vaginalis G3
Length = 451
Score = 104 bits (250), Expect = 2e-21
Identities = 46/84 (54%), Positives = 56/84 (66%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P RYYGG +Y+DE+E + R+L+ + L +EWGVNVQ SGSPAN AVYT ++ P
Sbjct: 70 GYPGARYYGGTKYVDELENETKRRALDLFNLNPKEWGVNVQALSGSPANLAVYTALLNPG 129
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
MGL L DGGHLTHG KK
Sbjct: 130 DTFMGLKLSDGGHLTHGHKLKAKK 153
Score = 89.4 bits (212), Expect = 9e-17
Identities = 45/96 (46%), Positives = 64/96 (66%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K S++SIF+ S Y ++PK+ LID++KL + AK P+LI+AG S Y R +D+K FR+I
Sbjct: 153 KVSSSSIFWNSEQYTLNPKTSLIDFEKLEQKAKELHPKLIVAGASAYPRFIDFKEFRKIC 212
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
+ ++ +AH SGL+AA PFEY DIVTT
Sbjct: 213 NQTNSIL-MSDVAHYSGLIAAGLYPSPFEYSDIVTT 247
Score = 46.8 bits (106), Expect = 7e-04
Identities = 30/76 (39%), Positives = 43/76 (56%)
Frame = +2
Query: 59 RYISSTKMSAKLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCL 238
R+ SS +S K+L E D + +I + E RQ+ G+E+IASEN+ S L LS+
Sbjct: 8 RFSSSWILSEKVLA----EKDRVINEIHLNEVKRQKEGIELIASENYPSRACLAALSTHF 63
Query: 239 HNKYSEACPINGTMGG 286
+NKY+E P GG
Sbjct: 64 NNKYAEGYPGARYYGG 79
>UniRef50_Q7RQX7 Cluster: Serine hydroxymethyltransferase; n=4;
Plasmodium|Rep: Serine hydroxymethyltransferase -
Plasmodium yoelii yoelii
Length = 446
Score = 104 bits (249), Expect = 3e-21
Identities = 48/84 (57%), Positives = 57/84 (67%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +RYYGGN+YID+IE L R+LE + L SEEWGVNVQ SGS AN +V
Sbjct: 61 GYPRKRYYGGNDYIDKIEELCCKRALETFNLNSEEWGVNVQSLSGSAANVQALYALVGIK 120
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
G+I+G+ L GGHLTHGFF KK
Sbjct: 121 GKILGMHLCSGGHLTHGFFDEKKK 144
Score = 73.3 bits (172), Expect = 7e-12
Identities = 47/105 (44%), Positives = 60/105 (57%), Gaps = 3/105 (2%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K S TS FES YK + + G +D D + E A FKP +II G S Y R LDYKRFREI
Sbjct: 144 KVSVTSDMFESKLYKSNSE-GYVDLDVVREMALSFKPNVIICGYSSYPRDLDYKRFREIA 202
Query: 684 RRKWELI*WLI--MAHVSGLVAARCNTEPFEYCDIV-TTNHSLRR 809
E+ +L+ +AH+S +A PF Y D+V TT H + R
Sbjct: 203 D---EVNAYLLADIAHISSFIACGNLNNPFLYADVVTTTTHKILR 244
Score = 53.6 bits (123), Expect = 6e-06
Identities = 26/69 (37%), Positives = 40/69 (57%)
Frame = +2
Query: 98 NSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGT 277
N L ++D EL+ I++ E+ RQ+ + +IASEN + V +CL + NKYSE P
Sbjct: 8 NEPLEKSDKELYSILLDEEKRQKETINLIASENLINASVKECLGHVVSNKYSEGYPRKRY 67
Query: 278 MGGMNILMK 304
GG + + K
Sbjct: 68 YGGNDYIDK 76
>UniRef50_Q98A81 Cluster: Serine hydroxymethyltransferase 2; n=4;
Bacteria|Rep: Serine hydroxymethyltransferase 2 -
Rhizobium loti (Mesorhizobium loti)
Length = 437
Score = 89.4 bits (212), Expect = 9e-17
Identities = 45/78 (57%), Positives = 54/78 (69%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P RYY GNE +DE+E LA R L+A SE NVQPYSGSPAN AVY ++ P
Sbjct: 62 GYPGARYYAGNEIVDELETLAIER-LKAL-FGSEH--ANVQPYSGSPANQAVYRALLSPR 117
Query: 436 GRIMGLDLPDGGHLTHGF 489
++MGL LP+GGHLTHG+
Sbjct: 118 DKVMGLPLPEGGHLTHGW 135
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/91 (37%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Frame = +3
Query: 528 FESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI* 707
++ +PY + K+ IDYD+L ETA+ +P+LI G + Y R DY EI +
Sbjct: 144 YQRVPYGLHDKTQQIDYDRLRETARRERPKLIWVGGTSYPRVFDYAAMAEIALEANSYL- 202
Query: 708 WLIMAHVSGLVAARCNTEPFEYCDIVT-TNH 797
+AH+SGL+ A + P +CD+VT T+H
Sbjct: 203 VADIAHISGLIVAGAHPNPVVHCDVVTSTSH 233
Score = 45.6 bits (103), Expect = 0.002
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = +2
Query: 101 SNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACP 265
S+L + D + +++++++ ++R L++IASENF S VL+ S NKY+E P
Sbjct: 10 SSLVQVDCRVHELLLRQRRQERTMLKLIASENFASSAVLEATGSIFANKYAEGYP 64
>UniRef50_Q89HS7 Cluster: Serine hydroxymethyltransferase; n=2;
Rhizobiales|Rep: Serine hydroxymethyltransferase -
Bradyrhizobium japonicum
Length = 460
Score = 87.0 bits (206), Expect = 5e-16
Identities = 41/77 (53%), Positives = 51/77 (66%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +RYYGG +Y DEIE LA+ R+ +R + NVQP SGSP N AVY G++EP
Sbjct: 89 GYPGRRYYGGQQYTDEIERLARERACSLFRAEH----ANVQPLSGSPMNQAVYLGLLEPG 144
Query: 436 GRIMGLDLPDGGHLTHG 486
I+ +DL GGHLTHG
Sbjct: 145 DTILAMDLSHGGHLTHG 161
Score = 52.0 bits (119), Expect = 2e-05
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 3/97 (3%)
Frame = +3
Query: 528 FESMPYKVDPKSG-LIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI 704
F + YK P +G ID+D+L A+ +P++++ G S Y R LDY F+ I L
Sbjct: 171 FNFIRYKTAPSNGGAIDFDELRAIAREARPKMVLCGYSSYPRDLDYAAFKSIADEVGALT 230
Query: 705 *WLIMAHVSGLVAARCNTEPFE--YCDIVTTNHSLRR 809
++H GLVAA P + + + TT+H R
Sbjct: 231 -MADVSHYGGLVAANVMRNPLDAGFDVMTTTSHKTLR 266
Score = 47.6 bits (108), Expect = 4e-04
Identities = 25/56 (44%), Positives = 33/56 (58%)
Frame = +2
Query: 119 DPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGTMGG 286
D E+ +V E+ RQ+ G+E+I SEN+T VL+ L S NKYSE P GG
Sbjct: 43 DQEIAAALVGEERRQQDGVELIPSENYTYPEVLELLGSVFTNKYSEGYPGRRYYGG 98
>UniRef50_Q5CM80 Cluster: Serine hydroxymethyltransferase; n=2;
Cryptosporidium|Rep: Serine hydroxymethyltransferase -
Cryptosporidium hominis
Length = 445
Score = 85.8 bits (203), Expect = 1e-15
Identities = 38/69 (55%), Positives = 49/69 (71%)
Frame = +1
Query: 301 EIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPHGRIMGLDLPDGGHLT 480
E+ L R+L+AY L E WG NV+P+SGSPANFAV +++P+ RIMGL L GGHLT
Sbjct: 70 ELLELTNERALKAYGLDPEVWGANVKPHSGSPANFAVLNAVLKPNDRIMGLSLQHGGHLT 129
Query: 481 HGFFTATKK 507
HG +T K+
Sbjct: 130 HGHYTNLKR 138
Score = 81.8 bits (193), Expect = 2e-14
Identities = 47/101 (46%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
Frame = +3
Query: 510 SATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRR 689
+ +S +FES+PY D + G+IDYDKL E A LF+P++IIAG S Y R +++KRFR+I
Sbjct: 140 NCSSHYFESLPYVTDLE-GVIDYDKLEENAILFRPKMIIAGASGYPRMINFKRFRDI-CD 197
Query: 690 KWELI*WLIMAHVSGLVAARCNTEPFEYCD-IVTTNHSLRR 809
K + + +AH SGLV A P +Y D I TT+H R
Sbjct: 198 KVKAYLMVDIAHYSGLVVAGKYPSPKDYADFITTTSHKTLR 238
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/47 (55%), Positives = 32/47 (68%)
Frame = +2
Query: 92 LLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSS 232
L +L E DP ++++I +E DRQ GLEMIASENF S VL LSS
Sbjct: 4 LQEKSLKELDPIMYELINEEYDRQINGLEMIASENFVSRGVLDSLSS 50
>UniRef50_Q9RYB2 Cluster: Serine hydroxymethyltransferase; n=43;
Bacteria|Rep: Serine hydroxymethyltransferase -
Deinococcus radiodurans
Length = 408
Score = 81.8 bits (193), Expect = 2e-14
Identities = 37/77 (48%), Positives = 53/77 (68%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +R+YGG E +D++E LA +R + + + EW NVQP+SGS AN AVY +++P
Sbjct: 58 GYPGKRWYGGCEVVDQVEQLAIDRVKQLF---NAEWA-NVQPHSGSSANLAVYNALIQPG 113
Query: 436 GRIMGLDLPDGGHLTHG 486
++G+DL GGHLTHG
Sbjct: 114 DTVLGMDLSHGGHLTHG 130
Score = 60.9 bits (141), Expect = 4e-08
Identities = 29/60 (48%), Positives = 38/60 (63%)
Frame = +2
Query: 119 DPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGTMGGMNIL 298
D +FD+I +E +RQR GLE+IASENFTS V + S L NKY+E P GG ++
Sbjct: 12 DDAVFDLIAQEAERQRTGLELIASENFTSAAVREAQGSVLTNKYAEGYPGKRWYGGCEVV 71
Score = 59.3 bits (137), Expect = 1e-07
Identities = 34/103 (33%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K + + + ++ + Y++D ++ ID +++ A KP++IIAG S YSR +D+ FREI
Sbjct: 132 KANFSGMRYQMVAYQLDRETERIDMEEVRRLAHEHKPKMIIAGASAYSRVIDFAAFREIA 191
Query: 684 RRKWELI*WLIMAHVSGLVAA--RCNTEPFEYCDIVTTNHSLR 806
L+ + +AH++GL+AA N P + TT+ +LR
Sbjct: 192 DEVGALL-FADIAHIAGLIAAGEHPNALPHAHVVASTTHKTLR 233
>UniRef50_A0CF19 Cluster: Chromosome undetermined scaffold_174,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_174,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 439
Score = 81.4 bits (192), Expect = 2e-14
Identities = 37/84 (44%), Positives = 51/84 (60%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G +Y E DEIE L Q R+L A++L ++WGVN Q SGS AN A++ G++EP
Sbjct: 62 GPQGSKYAPQVENYDEIEKLCQERALTAFQLDPQQWGVNAQMGSGSSANLAIFLGLLEPK 121
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
RIM ++ GGH +HG+ KK
Sbjct: 122 DRIMSMEFQQGGHFSHGYQIGEKK 145
Score = 80.2 bits (189), Expect = 6e-14
Identities = 46/103 (44%), Positives = 65/103 (63%), Gaps = 2/103 (1%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SA S FE + Y+++ K+ IDYDK+ AK +KP+LI+AG S YS+ +D+ RFR I
Sbjct: 145 KLSAISKIFEVLFYQLNEKTQEIDYDKVEILAKAYKPKLIVAGCSAYSKLIDFGRFRNIC 204
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIV--TTNHSLR 806
+ ++ +AH SGL++A PF Y DIV TT+ SLR
Sbjct: 205 DQVGAIL-LADIAHTSGLMSAGVIPSPFPYADIVMTTTHKSLR 246
Score = 39.9 bits (89), Expect = 0.075
Identities = 18/49 (36%), Positives = 31/49 (63%)
Frame = +2
Query: 107 LWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYS 253
L + D E++ +I KEK+ Q+ + +I SEN+TS V + LS ++Y+
Sbjct: 12 LQQQDIEIYQLIEKEKNLQQNSINLIPSENYTSRAVAEALSCVFSSRYA 60
>UniRef50_Q72IH2 Cluster: Serine hydroxymethyltransferase; n=6;
Bacteria|Rep: Serine hydroxymethyltransferase - Thermus
thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039)
Length = 407
Score = 80.6 bits (190), Expect = 4e-14
Identities = 42/77 (54%), Positives = 48/77 (62%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P RYYGG E ID +E LA R A L W NVQP+SGS AN AVY ++EP
Sbjct: 54 GYPGARYYGGCEAIDRVESLAIER---AKALFGAAWA-NVQPHSGSQANMAVYMALMEPG 109
Query: 436 GRIMGLDLPDGGHLTHG 486
+MG+DL GGHLTHG
Sbjct: 110 DTLMGMDLAAGGHLTHG 126
Score = 60.5 bits (140), Expect = 5e-08
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Frame = +3
Query: 528 FESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI* 707
++ + Y V P + LID +++ A +P++I+AG S Y R D+K FREI +
Sbjct: 136 YKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASAYPRFWDFKAFREIADEVGAYL- 194
Query: 708 WLIMAHVSGLVAARCNTEPFEYCDIVT-TNHSLRR 809
+ MAH +GLVAA + P Y +VT T H R
Sbjct: 195 VVDMAHFAGLVAAGLHPNPLPYAHVVTSTTHKTLR 229
Score = 54.8 bits (126), Expect = 2e-06
Identities = 28/56 (50%), Positives = 35/56 (62%)
Frame = +2
Query: 119 DPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGTMGG 286
D LF++I E+ RQR GLE+IASENF S V + + S L NKY+E P GG
Sbjct: 8 DEALFELIALEEKRQREGLELIASENFVSKQVREAVGSVLTNKYAEGYPGARYYGG 63
>UniRef50_Q8EWD1 Cluster: Serine hydroxymethyltransferase; n=14;
cellular organisms|Rep: Serine hydroxymethyltransferase
- Mycoplasma penetrans
Length = 412
Score = 79.8 bits (188), Expect = 8e-14
Identities = 36/77 (46%), Positives = 53/77 (68%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G PN+RYYGG EY D+IE LA +++ E + K NVQP+SG+ AN A Y +++P+
Sbjct: 49 GYPNRRYYGGCEYADQIEQLAIDKAKEIFNAKF----ANVQPHSGTQANVAAYLSVLKPN 104
Query: 436 GRIMGLDLPDGGHLTHG 486
+I+ + L +GGHL+HG
Sbjct: 105 DKILAMGLNEGGHLSHG 121
Score = 70.1 bits (164), Expect = 6e-11
Identities = 35/88 (39%), Positives = 54/88 (61%)
Frame = +3
Query: 528 FESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI* 707
+E+ Y VD ++ +DYD + + A+ KP+LI+ G S YSR +D+K+F EI + +
Sbjct: 131 YEADHYGVDKETQCLDYDAILKQAQEVKPKLIVCGASNYSRVVDFKKFGEIAKSVGAYL- 189
Query: 708 WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
+AH+SGL+ A + P Y DIVTT
Sbjct: 190 LADVAHISGLIVAGYHPNPLPYADIVTT 217
Score = 41.1 bits (92), Expect = 0.033
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = +2
Query: 128 LFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGTMGG 286
L +I+ E RQ+ +E+IASEN+ S +L+ S NKY E P GG
Sbjct: 6 LKEILNNELKRQQGYIELIASENYVSEQILEATGSVFTNKYCEGYPNRRYYGG 58
>UniRef50_Q8KC36 Cluster: Serine hydroxymethyltransferase; n=103;
cellular organisms|Rep: Serine hydroxymethyltransferase
- Chlorobium tepidum
Length = 440
Score = 79.8 bits (188), Expect = 8e-14
Identities = 42/77 (54%), Positives = 53/77 (68%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +RYYGG E++D E LA++R A +L E+ VNVQP+SGS AN AV +++P
Sbjct: 56 GYPGKRYYGGCEFVDVAENLARDR---AKKLFGCEY-VNVQPHSGSSANMAVLFAVLKPG 111
Query: 436 GRIMGLDLPDGGHLTHG 486
IMGLDL GGHLTHG
Sbjct: 112 DAIMGLDLSHGGHLTHG 128
Score = 76.6 bits (180), Expect = 7e-13
Identities = 38/89 (42%), Positives = 56/89 (62%)
Frame = +3
Query: 525 FFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI 704
FF++ Y VD ++G+ID +K+ E A+ KP+LII G S YS+ D+K FRE+ + L+
Sbjct: 137 FFDAHSYGVDKETGIIDMNKVEEMARRVKPKLIITGASAYSQGFDFKAFREVADKVGALL 196
Query: 705 *WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
+AH +GLVAA + P +C VTT
Sbjct: 197 -MADIAHPAGLVAAGLSANPMPHCHFVTT 224
Score = 56.4 bits (130), Expect = 8e-07
Identities = 29/63 (46%), Positives = 36/63 (57%)
Frame = +2
Query: 98 NSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGT 277
N L DPE+F+ I E RQ LE+IASENFTS V++ S + NKY+E P
Sbjct: 3 NDILKRLDPEVFEAIANETKRQTETLELIASENFTSKAVMEACGSVMTNKYAEGYPGKRY 62
Query: 278 MGG 286
GG
Sbjct: 63 YGG 65
>UniRef50_A7D249 Cluster: Glycine hydroxymethyltransferase; n=1;
Halorubrum lacusprofundi ATCC 49239|Rep: Glycine
hydroxymethyltransferase - Halorubrum lacusprofundi ATCC
49239
Length = 460
Score = 78.6 bits (185), Expect = 2e-13
Identities = 38/77 (49%), Positives = 51/77 (66%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +RYY G EY DE+E LA +R+ E + VNVQP+SG+ AN AVY +++P
Sbjct: 101 GYPGERYYAGCEYADEVETLAIDRAKELWGADH----VNVQPHSGTQANQAVYYAVLDPG 156
Query: 436 GRIMGLDLPDGGHLTHG 486
+I+ LDL GGHL+HG
Sbjct: 157 DKILSLDLNHGGHLSHG 173
Score = 56.4 bits (130), Expect = 8e-07
Identities = 30/91 (32%), Positives = 49/91 (53%)
Frame = +3
Query: 516 TSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKW 695
T +E Y+VD +G IDY+ L E A+ F+P ++++G S Y R +D++ +
Sbjct: 179 TGQIYEVEQYEVDADTGYIDYEGLREAAEEFEPDIVVSGYSAYPRTVDWEEI-QAAADAV 237
Query: 696 ELI*WLIMAHVSGLVAARCNTEPFEYCDIVT 788
+ +AH++GLVAA + P D VT
Sbjct: 238 DAYHLADIAHITGLVAAGVHPSPVGVADFVT 268
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/51 (50%), Positives = 31/51 (60%)
Frame = +2
Query: 113 EADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACP 265
E DPE+ D + E+DRQ L MIASEN S VL+ S L NKY+E P
Sbjct: 53 EVDPEVADALAGERDRQEQTLAMIASENHVSEAVLEAQGSVLTNKYAEGYP 103
>UniRef50_Q9A8J6 Cluster: Serine hydroxymethyltransferase; n=42;
Bacteria|Rep: Serine hydroxymethyltransferase -
Caulobacter crescentus (Caulobacter vibrioides)
Length = 429
Score = 77.0 bits (181), Expect = 5e-13
Identities = 37/77 (48%), Positives = 49/77 (63%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +RYYGG EY+DEIE +A R+ + NVQP+SGS AN AV+ +++P
Sbjct: 65 GYPGKRYYGGCEYVDEIETIAIERAKALFGAGF----ANVQPHSGSQANQAVFMALLQPG 120
Query: 436 GRIMGLDLPDGGHLTHG 486
+G+DL GGHLTHG
Sbjct: 121 DTFLGMDLAAGGHLTHG 137
Score = 69.3 bits (162), Expect = 1e-10
Identities = 38/89 (42%), Positives = 53/89 (59%)
Frame = +3
Query: 525 FFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI 704
+F+ + Y V + LIDYD +AE A+ KP+LIIAG S YSR +D+ +FREI +
Sbjct: 146 WFKPISYSVRQQDQLIDYDGVAEVAQREKPKLIIAGGSAYSREIDFAKFREIADSIGAYL 205
Query: 705 *WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
+ MAH +GL+A P + IVTT
Sbjct: 206 -MVDMAHYAGLIAGGAYANPIPHAHIVTT 233
Score = 51.6 bits (118), Expect = 2e-05
Identities = 30/74 (40%), Positives = 43/74 (58%)
Frame = +2
Query: 65 ISSTKMSAKLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHN 244
++ T +SA ++L AD ++FD I +E RQ+ +E+IASEN S VL+ S L N
Sbjct: 2 MTQTDLSA-FFGADLATADRDIFDRIGRELGRQQNQIELIASENIVSKAVLEAQGSILTN 60
Query: 245 KYSEACPINGTMGG 286
KY+E P GG
Sbjct: 61 KYAEGYPGKRYYGG 74
>UniRef50_Q9HPY5 Cluster: Serine hydroxymethyltransferase; n=79;
cellular organisms|Rep: Serine hydroxymethyltransferase
- Halobacterium salinarium (Halobacterium halobium)
Length = 415
Score = 76.2 bits (179), Expect = 9e-13
Identities = 38/77 (49%), Positives = 47/77 (61%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P RYYGG EY D++E LA R+ E + VNVQP+SGS AN VY + P
Sbjct: 56 GYPGSRYYGGCEYADDVEELAVARAKELFGADH----VNVQPHSGSSANMGVYFATLAPG 111
Query: 436 GRIMGLDLPDGGHLTHG 486
+I+ LDL GGHL+HG
Sbjct: 112 DKILSLDLTHGGHLSHG 128
Score = 55.2 bits (127), Expect = 2e-06
Identities = 30/87 (34%), Positives = 49/87 (56%)
Frame = +3
Query: 528 FESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI* 707
+E Y+VD ++G +DY+ L E A F+P +I++G S Y R ++++R + L
Sbjct: 138 YEVEQYEVDAETGRLDYEALREHADAFEPDMIVSGFSAYPREVEWERIQAAADAVGALH- 196
Query: 708 WLIMAHVSGLVAARCNTEPFEYCDIVT 788
+AH++GLVAA + P D VT
Sbjct: 197 MADIAHITGLVAAGEHASPVGVADFVT 223
Score = 50.4 bits (115), Expect = 5e-05
Identities = 27/58 (46%), Positives = 34/58 (58%)
Frame = +2
Query: 113 EADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGTMGG 286
E DPE+ D + E+ RQ L MIASEN S V++ SS L NKY+E P + GG
Sbjct: 8 EVDPEVADALTGERHRQNDTLAMIASENHVSEAVMEAQSSELTNKYAEGYPGSRYYGG 65
>UniRef50_Q8FQR1 Cluster: Serine hydroxymethyltransferase; n=37;
Bacteria|Rep: Serine hydroxymethyltransferase -
Corynebacterium efficiens
Length = 434
Score = 73.7 bits (173), Expect = 5e-12
Identities = 40/77 (51%), Positives = 50/77 (64%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +RYYGG E +D IE LA++R A L E+ NVQP+SG+ AN AV + +P
Sbjct: 65 GYPGRRYYGGCEQVDIIEDLARDR---AKALFDAEFA-NVQPHSGAQANAAVLMTLADPG 120
Query: 436 GRIMGLDLPDGGHLTHG 486
+IMGL L GGHLTHG
Sbjct: 121 DKIMGLSLAHGGHLTHG 137
Score = 71.3 bits (167), Expect = 3e-11
Identities = 37/88 (42%), Positives = 53/88 (60%)
Frame = +3
Query: 528 FESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI* 707
+E Y VDP + L+D D++ E A +P++IIAG S Y R LD+ FREI +
Sbjct: 147 YEVAAYGVDPDTMLVDMDQVREQAIKEQPKVIIAGWSAYPRHLDFAAFREIADEVGATL- 205
Query: 708 WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
W+ MAH +GLVAA + P Y D+V++
Sbjct: 206 WVDMAHFAGLVAAGLHPSPVPYADVVSS 233
Score = 53.6 bits (123), Expect = 6e-06
Identities = 31/60 (51%), Positives = 33/60 (55%)
Frame = +2
Query: 107 LWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGTMGG 286
L E DPE+ I E RQR LEMIASENF VLQ S L NKY+E P GG
Sbjct: 15 LSEIDPEVAQAIAGELSRQRDTLEMIASENFVPRSVLQAQGSVLTNKYAEGYPGRRYYGG 74
>UniRef50_Q183S3 Cluster: Serine hydroxymethyltransferase; n=1;
Clostridium difficile 630|Rep: Serine
hydroxymethyltransferase - Clostridium difficile (strain
630)
Length = 418
Score = 73.3 bits (172), Expect = 7e-12
Identities = 38/90 (42%), Positives = 53/90 (58%)
Frame = +3
Query: 543 YKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI*WLIMA 722
Y VDP +G IDYD L AK +P+LIIAG S Y R +DY+R ++ + + MA
Sbjct: 142 YGVDPNTGRIDYDALEAKAKECRPKLIIAGASSYPRLIDYERISKVAKEVGAYF-MVDMA 200
Query: 723 HVSGLVAARCNTEPFEYCDIVTTNHSLRRC 812
HV+GLVAA+ P Y D V+++ + C
Sbjct: 201 HVAGLVAAKVIPSPVPYADFVSSSTTKTFC 230
Score = 72.9 bits (171), Expect = 9e-12
Identities = 34/77 (44%), Positives = 49/77 (63%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P R+ G+E D++E LA R+ E + + VNVQPYSGS AN+ VY+ I++P+
Sbjct: 55 GYPGARFQAGSEEADKLETLAIKRAKEVFGAEH----VNVQPYSGSTANYCVYSSILKPN 110
Query: 436 GRIMGLDLPDGGHLTHG 486
++ + L GGHLTHG
Sbjct: 111 DTVLSMRLDQGGHLTHG 127
Score = 39.9 bits (89), Expect = 0.075
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Frame = +2
Query: 116 ADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLH-NKYSEACP 265
+DPEL+ I+ E RQ +EMIASE+ VL+ LS C+ NK E P
Sbjct: 8 SDPELYKIVADELVRQEHNIEMIASESTAPTEVLE-LSGCVFTNKTEEGYP 57
>UniRef50_A6PKY7 Cluster: Serine hydroxymethyltransferase; n=2;
Bacteria|Rep: Serine hydroxymethyltransferase -
Victivallis vadensis ATCC BAA-548
Length = 572
Score = 73.3 bits (172), Expect = 7e-12
Identities = 37/92 (40%), Positives = 57/92 (61%)
Frame = +3
Query: 516 TSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKW 695
+ + + +PY V+ ++ +IDYD++ A KPR+IIAG S Y R +D+ R R I
Sbjct: 292 SGMLYNIVPYGVNRETEMIDYDEVERLAVENKPRMIIAGASAYPRVIDFARLRAIADLVG 351
Query: 696 ELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
+ ++ MAH++GLVAA + P YCD+VTT
Sbjct: 352 AKL-FVDMAHIAGLVAAGEHPNPVPYCDVVTT 382
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/77 (44%), Positives = 49/77 (63%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +RYY G E++DEIE LA +R + + ++ NVQP++GS AN AVY + +P
Sbjct: 214 GYPGKRYYNGCEFVDEIEQLAIDRVKKLFGAEA----ANVQPHAGSSANQAVYMALCQPG 269
Query: 436 GRIMGLDLPDGGHLTHG 486
++ + L GGHLTHG
Sbjct: 270 DTVLSMSLDHGGHLTHG 286
Score = 46.8 bits (106), Expect = 7e-04
Identities = 25/50 (50%), Positives = 29/50 (58%)
Frame = +2
Query: 116 ADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACP 265
ADP + II E RQ G+E+IASENF S V S L NKY+E P
Sbjct: 167 ADPAVAAIIDHEAKRQADGIELIASENFASCAVRAAQGSVLTNKYAEGYP 216
>UniRef50_Q11NZ7 Cluster: Serine hydroxymethyltransferase; n=6;
Bacteria|Rep: Serine hydroxymethyltransferase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 431
Score = 71.7 bits (168), Expect = 2e-11
Identities = 34/77 (44%), Positives = 49/77 (63%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G+P +RYYGG + +D++E +A +R +L EW NVQP+SG+ AN A+ + P
Sbjct: 58 GLPGKRYYGGCQVVDQVEQIAIDR---LKKLFGAEWA-NVQPHSGAQANAAIMIACLNPG 113
Query: 436 GRIMGLDLPDGGHLTHG 486
I+G DL GGHL+HG
Sbjct: 114 DSILGFDLSHGGHLSHG 130
Score = 64.1 bits (149), Expect = 4e-09
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Frame = +3
Query: 525 FFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI 704
+F++ Y V+ +SGLI+ D + TA KP++II G S YSR DY RFR+I ++
Sbjct: 139 YFKAHFYGVEKESGLINMDIVEATALKVKPKMIICGASAYSRDWDYARFRKIADSVGAIL 198
Query: 705 *WLIMAHVSGLVAARCNTEPFEYCDIV-TTNHSLRR 809
++H +GL+A +P +C IV TT H R
Sbjct: 199 -LADISHPAGLIAKGLLNDPIPHCHIVSTTTHKTLR 233
Score = 61.7 bits (143), Expect = 2e-08
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = +2
Query: 119 DPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGTMGGMNIL 298
D ++FD+I KE RQ G+E+IASENFTS V++ + S L NKY+E P GG ++
Sbjct: 12 DTQIFDLISKEAHRQEEGIELIASENFTSKQVMEAMGSVLTNKYAEGLPGKRYYGGCQVV 71
>UniRef50_Q62I16 Cluster: Serine hydroxymethyltransferase 1; n=454;
root|Rep: Serine hydroxymethyltransferase 1 -
Burkholderia mallei (Pseudomonas mallei)
Length = 415
Score = 71.3 bits (167), Expect = 3e-11
Identities = 36/77 (46%), Positives = 48/77 (62%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +RYYGG EY+D +E LA +R + ++ NVQP SGS AN V+ +++P
Sbjct: 59 GYPGKRYYGGCEYVDIVEQLAIDRVKALFGAEA----ANVQPNSGSQANQGVFFAMLKPG 114
Query: 436 GRIMGLDLPDGGHLTHG 486
IMG+ L GGHLTHG
Sbjct: 115 DTIMGMSLAHGGHLTHG 131
Score = 50.4 bits (115), Expect = 5e-05
Identities = 26/74 (35%), Positives = 42/74 (56%)
Frame = +3
Query: 570 IDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI*WLIMAHVSGLVAAR 749
IDY+ + A KP+LI+AG S ++ +D++R +I + + + MAH +GL+AA
Sbjct: 154 IDYEAAEQLAHEHKPKLIVAGASAFALKIDFERLAKIAKAVGAYL-MVDMAHYAGLIAAG 212
Query: 750 CNTEPFEYCDIVTT 791
P + D VTT
Sbjct: 213 VYPNPVPHADFVTT 226
Score = 50.0 bits (114), Expect = 7e-05
Identities = 26/62 (41%), Positives = 35/62 (56%)
Frame = +2
Query: 101 SNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGTM 280
S + DPE++ I +E RQ +E+IASEN+TS V+ S L NKY+E P
Sbjct: 7 STIANVDPEIWQAIQQENVRQEEHIELIASENYTSPAVMAAQGSQLTNKYAEGYPGKRYY 66
Query: 281 GG 286
GG
Sbjct: 67 GG 68
>UniRef50_Q6LHN7 Cluster: Serine hydroxymethyltransferase 2; n=27;
Bacteria|Rep: Serine hydroxymethyltransferase 2 -
Photobacterium profundum (Photobacterium sp. (strain
SS9))
Length = 431
Score = 70.9 bits (166), Expect = 4e-11
Identities = 34/77 (44%), Positives = 50/77 (64%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G RYYGG E++DE+E +A R+ + ++ + VNVQP+SG+ AN AV +++P
Sbjct: 68 GYAGHRYYGGCEHVDEVEKIAIARAKQLFQCEY----VNVQPHSGAQANGAVMLALLQPG 123
Query: 436 GRIMGLDLPDGGHLTHG 486
I+G+ L GGHLTHG
Sbjct: 124 DTILGMSLDAGGHLTHG 140
Score = 58.4 bits (135), Expect = 2e-07
Identities = 30/89 (33%), Positives = 54/89 (60%)
Frame = +3
Query: 525 FFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI 704
+F+++ Y V+ + IDY+++ E A KP++IIAG S R +++ +FREI +
Sbjct: 149 WFDAVQYGVNKDTLEIDYNQVRELAIEHKPKMIIAGGSAIPRIINFAKFREIADEVGAFL 208
Query: 705 *WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
+ MAH++GL+AA + P + ++TT
Sbjct: 209 -MVDMAHIAGLIAAGEHPSPIPHAHVITT 236
Score = 43.2 bits (97), Expect = 0.008
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 98 NSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGT 277
++NL + D + I E +RQ +E+IASEN S V+Q +CL NKY+E +
Sbjct: 15 STNLAQVDGAVNAGIEAELNRQNQQIELIASENIVSKAVMQAQGTCLTNKYAEGYAGHRY 74
Query: 278 MGG 286
GG
Sbjct: 75 YGG 77
>UniRef50_Q057P9 Cluster: Serine hydroxymethyltransferase; n=3;
Gammaproteobacteria|Rep: Serine hydroxymethyltransferase
- Buchnera aphidicola subsp. Cinara cedri
Length = 417
Score = 69.7 bits (163), Expect = 8e-11
Identities = 35/91 (38%), Positives = 55/91 (60%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G R+Y G ID+IE +A R+ + + ++ VNVQP+SGS ANF+V+ +++P+
Sbjct: 56 GYIGNRFYNGCNIIDKIEKIAIKRAKKLFNVEY----VNVQPHSGSQANFSVFNALLKPN 111
Query: 436 GRIMGLDLPDGGHLTHGFFTATKKNLLRQYS 528
I+G++L GGHLTHG L + +S
Sbjct: 112 DIILGMNLNHGGHLTHGSTVNFSGKLYKSFS 142
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/71 (42%), Positives = 46/71 (64%)
Frame = +2
Query: 92 LLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPIN 271
++N+NL DP+++ +I+KEK RQ + + +IASEN+ S +L+ SCL NKY+E N
Sbjct: 1 MINTNLKNYDPKIWKLIIKEKKRQESYINLIASENYVSSSILEAQGSCLTNKYAEGYIGN 60
Query: 272 GTMGGMNILMK 304
G NI+ K
Sbjct: 61 RFYNGCNIIDK 71
Score = 54.0 bits (124), Expect = 4e-06
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +3
Query: 528 FESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI* 707
++S Y V+ K G IDYD L + L +P++II G S YS D+K R+I +
Sbjct: 138 YKSFSYGVN-KCGEIDYDALKYLSHLHRPKMIIGGFSAYSGICDWKYMRKI-ADEINAYF 195
Query: 708 WLIMAHVSGLVAARCNTEPFEYCDIV-TTNH 797
++ ++H+ GL+ A P +Y +V TT H
Sbjct: 196 FVDISHIVGLIVAGIYPNPLKYAHVVSTTTH 226
>UniRef50_Q6G3L3 Cluster: Serine hydroxymethyltransferase; n=163;
cellular organisms|Rep: Serine hydroxymethyltransferase
- Bartonella henselae (Rochalimaea henselae)
Length = 437
Score = 68.5 bits (160), Expect = 2e-10
Identities = 37/77 (48%), Positives = 48/77 (62%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +RYYGG +++D IE LA R A +L ++ NVQ SGS N AV+ +++P
Sbjct: 67 GYPGKRYYGGCQFVDVIENLAIER---AKKLFGADFA-NVQANSGSQMNQAVFLALLKPG 122
Query: 436 GRIMGLDLPDGGHLTHG 486
MGLDL GGHLTHG
Sbjct: 123 DTFMGLDLNSGGHLTHG 139
Score = 65.3 bits (152), Expect = 2e-09
Identities = 36/89 (40%), Positives = 53/89 (59%)
Frame = +3
Query: 525 FFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI 704
+F+S+ Y V + L+D + + AK KP+LIIAG S YSR D+K+FREI +
Sbjct: 148 WFKSISYGVRKEDQLLDMEAVERLAKEHKPKLIIAGGSAYSRLWDWKKFREIADEIGAYL 207
Query: 705 *WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
+ M+H++GLVA + P + IVTT
Sbjct: 208 -LVDMSHIAGLVAGGVHPSPVPHAHIVTT 235
Score = 51.6 bits (118), Expect = 2e-05
Identities = 28/66 (42%), Positives = 36/66 (54%)
Frame = +2
Query: 89 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPI 268
+ N NL D +FD I E +RQ+ +E+IASEN S VL+ S L NKY+E P
Sbjct: 11 RFFNDNLQTVDVAIFDAIRGEFERQQHEIELIASENIVSRAVLEAQGSVLTNKYAEGYPG 70
Query: 269 NGTMGG 286
GG
Sbjct: 71 KRYYGG 76
>UniRef50_Q05FV9 Cluster: Serine hydroxymethyltransferase; n=1;
Candidatus Carsonella ruddii PV|Rep: Serine
hydroxymethyltransferase - Carsonella ruddii (strain PV)
Length = 398
Score = 66.5 bits (155), Expect = 8e-10
Identities = 34/78 (43%), Positives = 46/78 (58%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G PNQRYY G ++ D IE +E L + + NVQ +SGS ANF+ ++ +
Sbjct: 49 GYPNQRYYSGCKFFDIIE---NKTIIETQNLFNSNFA-NVQSHSGSQANFSGIQSLINKN 104
Query: 436 GRIMGLDLPDGGHLTHGF 489
+I+ LDL GGHLTHGF
Sbjct: 105 EKILSLDLKSGGHLTHGF 122
Score = 41.9 bits (94), Expect = 0.019
Identities = 27/95 (28%), Positives = 51/95 (53%)
Frame = +3
Query: 507 KSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRR 686
K+ + +F+ + Y +D K+ I+ + L + K KP+++I G S Y + +D+ F +
Sbjct: 124 KNFSGKYFDIVNYLLD-KNFSINKEYLYKIIKKEKPKILILGYSSYQKYIDWDFFYYLSI 182
Query: 687 RKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
+ + I +H+SGL+A+ P Y +VTT
Sbjct: 183 KNNCFVISDI-SHISGLIASGLYPSPLNYSSLVTT 216
Score = 40.7 bits (91), Expect = 0.043
Identities = 19/46 (41%), Positives = 28/46 (60%)
Frame = +2
Query: 128 LFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACP 265
+ + I E +Q L +IASEN++S+ + SSCL NKY+E P
Sbjct: 6 ILNFIKIESKKQEKTLNLIASENYSSITSILYSSSCLTNKYTEGYP 51
>UniRef50_A7R0L6 Cluster: Chromosome undetermined scaffold_311,
whole genome shotgun sequence; n=3; Vitis vinifera|Rep:
Chromosome undetermined scaffold_311, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 340
Score = 66.5 bits (155), Expect = 8e-10
Identities = 36/66 (54%), Positives = 42/66 (63%)
Frame = +2
Query: 89 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPI 268
K LN+ L DPE+ DII EK RQ GLE+I SENFTSV V+Q + S + NKYSE P
Sbjct: 230 KQLNAPLGVVDPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSIMTNKYSEGYPG 289
Query: 269 NGTMGG 286
GG
Sbjct: 290 ARYYGG 295
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/37 (62%), Positives = 26/37 (70%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWG 366
G P RYYGGNEYID E L Q R+LEA+RL +WG
Sbjct: 286 GYPGARYYGGNEYIDMAESLCQKRALEAFRLDPAKWG 322
>UniRef50_Q12RK5 Cluster: Glycine hydroxymethyltransferase; n=2;
Gammaproteobacteria|Rep: Glycine
hydroxymethyltransferase - Shewanella denitrificans
(strain OS217 / ATCC BAA-1090 / DSM 15013)
Length = 451
Score = 65.7 bits (153), Expect = 1e-09
Identities = 33/89 (37%), Positives = 55/89 (61%)
Frame = +3
Query: 525 FFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI 704
+++++ Y + GLIDYD++ + A+L KPRLII G + YSR +D++RFREI ++
Sbjct: 153 YYQAIGYGTTSQ-GLIDYDEVLKLARLHKPRLIICGATAYSRIVDFERFREIADEVGAIL 211
Query: 705 *WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
++H++GLVA + P + TT
Sbjct: 212 -LADISHIAGLVATGRHPSPINAAHVTTT 239
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/77 (37%), Positives = 45/77 (58%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +RY+ G E +D +E LA +R+ + + + VQ +S S AN+ V + +EP
Sbjct: 72 GTPGRRYHAGCENVDLVESLAISRARQLFDAQY----AGVQSHSASSANYQVLSAFLEPG 127
Query: 436 GRIMGLDLPDGGHLTHG 486
++G+ L GGHLTHG
Sbjct: 128 DTLLGMSLDHGGHLTHG 144
>UniRef50_Q9PJW0 Cluster: Serine hydroxymethyltransferase; n=8;
Chlamydiaceae|Rep: Serine hydroxymethyltransferase -
Chlamydia muridarum
Length = 497
Score = 63.7 bits (148), Expect = 5e-09
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 3/88 (3%)
Frame = +3
Query: 537 MPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI*WLI 716
+PY+V+ + L DYD +A+ AK +P ++IAG S YSR L++ ++I ++ W+
Sbjct: 199 LPYEVNLDTELFDYDVIAKIAKEHRPTVLIAGYSSYSRRLNFATLKQIAEDCGAVL-WVD 257
Query: 717 MAHVSGLVAARC---NTEPFEYCDIVTT 791
MAH +GLVA P Y DIVTT
Sbjct: 258 MAHFAGLVAGGVFIGEENPIPYADIVTT 285
Score = 42.3 bits (95), Expect = 0.014
Identities = 22/54 (40%), Positives = 33/54 (61%)
Frame = +2
Query: 104 NLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACP 265
+L + P + IV+E QR+ L+MIASENF+S+ V + + L +KY E P
Sbjct: 31 HLLHSFPSIGQSIVQELKSQRSRLKMIASENFSSLSVQLAMGNLLTDKYCEGSP 84
Score = 28.3 bits (60), Expect(2) = 4.3
Identities = 18/57 (31%), Positives = 27/57 (47%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIV 426
G P +R+Y E +D IE + E + +S VQP+SG+ AN I+
Sbjct: 82 GSPFKRFYSCCENVDAIEWECVETAKELFGAES----ACVQPHSGADANLLAIMSII 134
Score = 24.6 bits (51), Expect(2) = 4.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 439 RIMGLDLPDGGHLTHG 486
+ +G L GGHLTHG
Sbjct: 170 KCLGPSLNSGGHLTHG 185
>UniRef50_Q883D8 Cluster: Serine hydroxymethyltransferase, putative;
n=1; Pseudomonas syringae pv. tomato|Rep: Serine
hydroxymethyltransferase, putative - Pseudomonas
syringae pv. tomato
Length = 364
Score = 62.5 bits (145), Expect = 1e-08
Identities = 34/95 (35%), Positives = 49/95 (51%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K + + +FF Y VD + LIDYD + A FKP+LI+ G S Y R D +R REI
Sbjct: 74 KVNFSGMFFNFRHYGVDEATDLIDYDLAEQDAIRFKPKLIVCGSSSYPRLFDARRLREIS 133
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVT 788
+ L+ ++H +GL+A P D+ T
Sbjct: 134 DKVGALL-MFDLSHEAGLIACGAIPNPVPLADVAT 167
Score = 53.2 bits (122), Expect = 8e-06
Identities = 31/76 (40%), Positives = 45/76 (59%)
Frame = +1
Query: 259 MPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPHG 438
M +R + G + DEIE A +L A R+ + E N+QP+S S AN +VY ++EP
Sbjct: 1 MAGKRPFAGARFHDEIERTA---ALIACRVFNAEHA-NLQPHSCSQANQSVYHALLEPGD 56
Query: 439 RIMGLDLPDGGHLTHG 486
++ L+ GGHLTHG
Sbjct: 57 NVLALNFKAGGHLTHG 72
>UniRef50_Q8TZ19 Cluster: Serine hydroxymethyltransferase; n=8;
Euryarchaeota|Rep: Serine hydroxymethyltransferase -
Methanopyrus kandleri
Length = 428
Score = 58.8 bits (136), Expect = 2e-07
Identities = 30/76 (39%), Positives = 41/76 (53%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +R Y G EYIDE+E+ + E + + NVQP SG AN A + EP
Sbjct: 53 GKPGERLYEGCEYIDEVELACVRLAKELFGAEH----ANVQPTSGVVANLAALFALTEPG 108
Query: 436 GRIMGLDLPDGGHLTH 483
I+GL + GGH++H
Sbjct: 109 DTILGLRISHGGHISH 124
>UniRef50_O83349 Cluster: Serine hydroxymethyltransferase; n=18;
Bacteria|Rep: Serine hydroxymethyltransferase -
Treponema pallidum
Length = 574
Score = 56.8 bits (131), Expect = 6e-07
Identities = 35/106 (33%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
+++ + F + Y VD +GL+DY + AK +P +++AG S Y R ++++ FREI
Sbjct: 187 RQNVSGRMFRVVSYAVDRDTGLLDYAAIEAQAKRERPLILLAGYSAYPRSINFRIFREIA 246
Query: 684 RRKWELI*WLIMAHVSGLVAARCNT---EPFEYCDIVT-TNHSLRR 809
+ ++ MAH +GLVA T +P + IVT T H R
Sbjct: 247 DKVGAVL-MADMAHFAGLVAGGVFTGDEDPVRWSHIVTSTTHKTLR 291
Score = 40.7 bits (91), Expect = 0.043
Identities = 20/55 (36%), Positives = 36/55 (65%)
Frame = +2
Query: 122 PELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGTMGG 286
P++ IV+E QR+ +++IASEN++S+ V +++ L +KY+E P + GG
Sbjct: 37 PQIASDIVQELIDQRSYVKLIASENYSSLAVQAAMANLLTDKYAEGFPHHRYYGG 91
Score = 39.1 bits (87), Expect(2) = 6e-05
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIV 426
G P+ RYYGG + +D IE A + EA L E VQP+SG+ AN + I+
Sbjct: 82 GFPHHRYYGGCQNVDSIESAA---AAEACALFGAEHAY-VQPHSGADANLVAFWAIL 134
Score = 30.7 bits (66), Expect(2) = 6e-05
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = +1
Query: 439 RIMGLDLPDGGHLTHGF 489
++MGLD GGHLTHG+
Sbjct: 170 KLMGLDYFSGGHLTHGY 186
>UniRef50_Q9UMD0 Cluster: 14 kDa protein; n=2; Homo sapiens|Rep: 14
kDa protein - Homo sapiens (Human)
Length = 129
Score = 55.2 bits (127), Expect = 2e-06
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +1
Query: 271 RYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQP 381
RYYGG E+IDE+E L Q R+L+AY+L + WGV+V P
Sbjct: 65 RYYGGTEFIDELETLCQKRALQAYKLDPQCWGVDVHP 101
>UniRef50_Q9TSA5 Cluster: Serine hydroxymethyltransferase; n=1; Ovis
aries|Rep: Serine hydroxymethyltransferase - Ovis aries
(Sheep)
Length = 150
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +3
Query: 549 VDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREI 680
V+P +G IDYD+L E A+LF P+LIIAG SCYSR F+++
Sbjct: 54 VNPDTGYIDYDQLEENARLFHPKLIIAGTSCYSRQAMTPEFKQV 97
Score = 33.5 bits (73), Expect = 6.5
Identities = 16/26 (61%), Positives = 17/26 (65%)
Frame = +1
Query: 400 NFAVYTGIVEPHGRIMGLDLPDGGHL 477
NFA P RIMGLDLPDGGH+
Sbjct: 29 NFASRYSEGYPGQRIMGLDLPDGGHV 54
>UniRef50_Q5CM83 Cluster: Serine hydroxymethyltransferase 2; n=2;
Cryptosporidium|Rep: Serine hydroxymethyltransferase 2 -
Cryptosporidium hominis
Length = 438
Score = 54.0 bits (124), Expect = 4e-06
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 3/67 (4%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRL---KSEEWGVNVQPYSGSPANFAVYTGIV 426
G P RYYGG ID+IE L +R + +L ++EW N+Q YSGS A A+ G++
Sbjct: 54 GFPGTRYYGGTHVIDKIETLCASRLKQFLKLDKKSNDEWLFNIQCYSGSHAELAICMGLL 113
Query: 427 EPHGRIM 447
RI+
Sbjct: 114 NKGDRIL 120
Score = 47.6 bits (108), Expect = 4e-04
Identities = 27/64 (42%), Positives = 35/64 (54%)
Frame = +2
Query: 113 EADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGTMGGMN 292
E+D ELF+II KEKD Q + L + EN + L S L NKYSE P GG +
Sbjct: 6 ESDQELFNIINKEKDFQNSHLNLHPKENVMINAARKVLGSILTNKYSEGFPGTRYYGGTH 65
Query: 293 ILMK 304
++ K
Sbjct: 66 VIDK 69
Score = 36.3 bits (80), Expect = 0.93
Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 4/94 (4%)
Frame = +3
Query: 525 FFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI 704
+++ Y +D K D L E K+ KP+L++ + +DY+ EI ++++
Sbjct: 133 YYQVEYYNLDKKGRGFDIADLREKCKILKPKLLLVPSDVLTLFIDYRLLSEI-CSEFKIF 191
Query: 705 *WLIMAHVSGLVA----ARCNTEPFEYCDIVTTN 794
++ ++ L++ + P+ YCDI+ +N
Sbjct: 192 LVADISEIALLISFDRYGKEKNNPYRYCDIIYSN 225
>UniRef50_O29406 Cluster: Serine hydroxymethyltransferase; n=6;
Euryarchaeota|Rep: Serine hydroxymethyltransferase -
Archaeoglobus fulgidus
Length = 438
Score = 53.6 bits (123), Expect = 6e-06
Identities = 31/88 (35%), Positives = 45/88 (51%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G +R+Y G +Y+D+IE +A +E R E NVQP SG AN A + +
Sbjct: 66 GRVGERFYEGCKYVDQIESMA----IELTRKIFEAEHANVQPISGVVANLAAFFALTNVG 121
Query: 436 GRIMGLDLPDGGHLTHGFFTATKKNLLR 519
IM + +P GGH++H +A LR
Sbjct: 122 DTIMSISVPCGGHISHDRVSAAGLRGLR 149
Score = 35.5 bits (78), Expect = 1.6
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Frame = +2
Query: 83 SAKLLNSNLWEADP-ELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSE 256
S K +S + +P ++F II R + +IASEN TS+ V +C S L ++Y+E
Sbjct: 7 SLKYFSSVAEDMNPSDVFQIIEGHTKLMRDSIPLIASENLTSLSVRRCYVSDLGHRYAE 65
>UniRef50_A0RYP2 Cluster: Glycine/serine hydroxymethyltransferase;
n=2; Thermoprotei|Rep: Glycine/serine
hydroxymethyltransferase - Cenarchaeum symbiosum
Length = 441
Score = 50.8 bits (116), Expect = 4e-05
Identities = 24/77 (31%), Positives = 41/77 (53%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +R Y G YID +E + + ++ + + V+P SG AN A+Y+ +P
Sbjct: 57 GWPGERVYAGCTYIDMVETECMKLAKKLFKAEFAD----VRPVSGVVANLAIYSAFSDPG 112
Query: 436 GRIMGLDLPDGGHLTHG 486
++ +P GGH++HG
Sbjct: 113 DVMIAPSIPAGGHISHG 129
>UniRef50_Q1W396 Cluster: Glycine hydroxymethyltransferase; n=1;
Striga asiatica|Rep: Glycine hydroxymethyltransferase -
Striga asiatica (Asiatic witchweed) (Striga lutea)
Length = 125
Score = 48.4 bits (110), Expect = 2e-04
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = +2
Query: 86 AKLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCL 226
+ ++ L EADPE+ II KEK+RQ LE+IASENFTS V++ +
Sbjct: 78 SSFVDYGLSEADPEVHSIIDKEKNRQFRSLELIASENFTSRAVMEAV 124
>UniRef50_Q8ZYF9 Cluster: Serine hydroxymethyltransferase; n=5;
Thermoproteaceae|Rep: Serine hydroxymethyltransferase -
Pyrobaculum aerophilum
Length = 430
Score = 47.2 bits (107), Expect = 5e-04
Identities = 26/76 (34%), Positives = 38/76 (50%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G RYY G +Y+D +E R + K V+V+P SG+ AN A Y +V
Sbjct: 53 GTVGNRYYQGTKYVDILEDSLSKRFAKVLDAKF----VDVRPISGTIANLATYHALVPEG 108
Query: 436 GRIMGLDLPDGGHLTH 483
G + L + GGH++H
Sbjct: 109 GIVASLPVKYGGHISH 124
>UniRef50_Q9YAH7 Cluster: Serine hydroxymethyltransferase; n=9;
Archaea|Rep: Serine hydroxymethyltransferase - Aeropyrum
pernix
Length = 439
Score = 44.4 bits (100), Expect = 0.003
Identities = 26/79 (32%), Positives = 42/79 (53%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +RYY G YIDE+E+L L + + V ++P SG+ AN +V+ + EP
Sbjct: 60 GKPFKRYYQGTRYIDELEVL--TGELMGSMMGTNL--VELRPVSGTIANASVFRVLAEPG 115
Query: 436 GRIMGLDLPDGGHLTHGFF 492
+ + + G H++H F
Sbjct: 116 DKAVIAPVQAGAHVSHTKF 134
>UniRef50_A6TST7 Cluster: Glycine hydroxymethyltransferase; n=1;
Alkaliphilus metalliredigens QYMF|Rep: Glycine
hydroxymethyltransferase - Alkaliphilus metalliredigens
QYMF
Length = 368
Score = 42.7 bits (96), Expect = 0.011
Identities = 22/71 (30%), Positives = 36/71 (50%)
Frame = +1
Query: 262 PNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPHGR 441
P R Y GN+YI E E+ + ++ K V+++P G A +V G++EP
Sbjct: 17 PEDREYTGNQYIHEFEMATHELVKDIFKAKY----VDLRPIGGHMAGMSVVLGMLEPGDL 72
Query: 442 IMGLDLPDGGH 474
++ + L D GH
Sbjct: 73 VIEVSLSDWGH 83
>UniRef50_Q9HI38 Cluster: Serine hydroxymethyltransferase; n=5;
Thermoplasmatales|Rep: Serine hydroxymethyltransferase -
Thermoplasma acidophilum
Length = 426
Score = 41.5 bits (93), Expect = 0.025
Identities = 24/79 (30%), Positives = 36/79 (45%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G+P+ RYY GN Y+D IE + +R + +P SG+ AN A + P
Sbjct: 52 GLPHHRYYQGNYYVDLIEDRTNELLSKLFRTSQ----TDPRPISGTNANSAAIYALAGPG 107
Query: 436 GRIMGLDLPDGGHLTHGFF 492
+ L GGH++ F
Sbjct: 108 DLVATPSLSGGGHISAAEF 126
>UniRef50_Q28QL6 Cluster: Glycine hydroxymethyltransferase; n=7;
Rhodobacteraceae|Rep: Glycine hydroxymethyltransferase -
Jannaschia sp. (strain CCS1)
Length = 445
Score = 40.3 bits (90), Expect = 0.057
Identities = 22/76 (28%), Positives = 37/76 (48%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P +Y G E ++E E++A + E +R + E ++ SG+ AN + +P
Sbjct: 80 GYPGDKYEMGLEAVEEAEVIAAELAAEVFRARFAE----IRVASGAMANLYAFMATCQPG 135
Query: 436 GRIMGLDLPDGGHLTH 483
I+ GGH+TH
Sbjct: 136 DTIIVPPASIGGHVTH 151
>UniRef50_Q6L0Q9 Cluster: Serine hydroxymethyltransferase; n=1;
Picrophilus torridus|Rep: Serine
hydroxymethyltransferase - Picrophilus torridus
Length = 377
Score = 39.9 bits (89), Expect = 0.075
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +3
Query: 558 KSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI*WLIMAHVSGL 737
KSG IDYD + + A+ +P +II G S ++ D KR ++ R I + +HV GL
Sbjct: 132 KSGSIDYDAMEKIARSERPSVIILGQSEFTMPYDIKRVYDLSREIDSRIIY-DASHVLGL 190
Query: 738 VAAR 749
+A R
Sbjct: 191 IAGR 194
>UniRef50_Q97AK0 Cluster: Serine hydroxymethyltransferase; n=3;
Thermoplasma|Rep: Serine hydroxymethyltransferase -
Thermoplasma volcanium
Length = 389
Score = 37.5 bits (83), Expect = 0.40
Identities = 21/86 (24%), Positives = 40/86 (46%)
Frame = +3
Query: 528 FESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRRKWELI* 707
F S + P ID++ +T +P+++I G S + + D + RE+ ++
Sbjct: 131 FRSYDIPMKPDQA-IDFESFEKTIDYIRPKVVILGQSVFVKSYDIPKVRELCNSVGSMLL 189
Query: 708 WLIMAHVSGLVAARCNTEPFEYCDIV 785
+ +HV GL+A + CD+V
Sbjct: 190 Y-DASHVMGLIAGGTFQKDIGLCDVV 214
>UniRef50_Q5DH62 Cluster: SJCHGC03592 protein; n=1; Schistosoma
japonicum|Rep: SJCHGC03592 protein - Schistosoma
japonicum (Blood fluke)
Length = 107
Score = 36.7 bits (81), Expect = 0.70
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +2
Query: 47 FAAKRYISSTKMSAKLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASE-NFTSVPVLQC 223
F++ S +AK L D EL+++I KE+ RQ++ L +IASE F + P C
Sbjct: 14 FSSNSSSSRVSTAAKCATGGLQTKDTELWELIQKERYRQKSSLTLIASEVRFFTCP---C 70
Query: 224 LSSCLHNKYS 253
L+ K S
Sbjct: 71 YFRTLYRKVS 80
>UniRef50_A7BUG6 Cluster: Exodeoxyribonuclease V, beta subunit; n=1;
Beggiatoa sp. PS|Rep: Exodeoxyribonuclease V, beta
subunit - Beggiatoa sp. PS
Length = 358
Score = 34.7 bits (76), Expect = 2.8
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = -3
Query: 719 HNQPSDKLPFASANLTEPLIIETSGVTAHASD--DQTRLEQLRCFC*FVVIN*SAFRIYL 546
+N SD+ F L + + + AH + D+ R E LR F +V + + R YL
Sbjct: 100 YNSKSDQFIFHDEQEKMTLDLGSEEIEAHRARALDEERAENLRLF--YVAVTRAKHRCYL 157
Query: 545 IWHAFKE 525
+W AFK+
Sbjct: 158 VWGAFKD 164
>UniRef50_A5BGY5 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 541
Score = 34.7 bits (76), Expect = 2.8
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 334 PETCSVPVSLFHQYIHSPHSTVDWACLR 251
P+ S+P +FHQY H PH D+A ++
Sbjct: 414 PQLRSIPTPIFHQYWHEPHLWTDYATVK 441
>UniRef50_A0C8P8 Cluster: Chromosome undetermined scaffold_159,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_159,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 384
Score = 34.7 bits (76), Expect = 2.8
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P ++ G E D+IE R+ + + L + + VNVQ S + A F V +V+P
Sbjct: 68 GYPGKKNKPGTEIYDKIEQTCWERAQKLFNLHN--FNVNVQLQSVTTAKFIVSKALVKPG 125
Query: 436 GRIM 447
G I+
Sbjct: 126 GTIL 129
>UniRef50_Q6LJK0 Cluster: Hypothetical transposase; n=1;
Photobacterium profundum|Rep: Hypothetical transposase -
Photobacterium profundum (Photobacterium sp. (strain
SS9))
Length = 394
Score = 34.3 bits (75), Expect = 3.7
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Frame = +3
Query: 411 LYRHCRTPWQDNGVRFT*RWTSHPWFL--YCY*KKSATSIFF-ESMPYKVDPKSGLIDYD 581
++++ + W+ N + FT R ++H W L +C ++F S+P K K + D
Sbjct: 2 IFKYYTSRWKINALTFTKRDSNHSWTLCKHCLAMMHLRLLYFGRSLPSKAKTKHCIKRVD 61
Query: 582 KLAETAKLFKPRLIIAGMSCYSRC 653
+L L RL I C+ C
Sbjct: 62 RLLGNNHLHHDRLDIYRWHCHQFC 85
>UniRef50_Q6MP91 Cluster: Putative secreted esterase precursor; n=1;
Bdellovibrio bacteriovorus|Rep: Putative secreted
esterase precursor - Bdellovibrio bacteriovorus
Length = 909
Score = 33.5 bits (73), Expect = 6.5
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Frame = +1
Query: 337 AYRLKSEEWGVNVQ---PYSGSPANFAVYTGIVEPHGRI-MGLDLPDGGHLTHGFFTATK 504
A R S W V P S +P N AV T ++P + + LD D H+T FFT T
Sbjct: 188 AERSSSGVWSVTTAFQAPVSAAPTNVAVAT--IDPMKALRLVLDSEDRPHITFSFFTQTS 245
Query: 505 KNLLRQYSLKA 537
N +Y ++
Sbjct: 246 TNSQVKYLFRS 256
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 868,765,466
Number of Sequences: 1657284
Number of extensions: 18425870
Number of successful extensions: 42118
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 40694
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42055
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 70914189703
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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