Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0868
         (823 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       26   0.31 
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        23   2.2  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.9  
EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxyla...    22   6.8  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   8.9  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 26.2 bits (55), Expect = 0.31
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -2

Query: 696 PICVCESHGTSYNRDIWSNS 637
           P CV   HGT +  + W NS
Sbjct: 257 PKCVLSDHGTQFISNTWQNS 276



 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +2

Query: 353 RKNGASMYSHIQALRRTLPFIPALS 427
           R+N AS  +H+  +   L ++P +S
Sbjct: 313 RENHASWVNHLSNIEDCLNYVPHIS 337


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 9/46 (19%), Positives = 24/46 (52%)
 Frame = +1

Query: 268 QRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANF 405
           Q+Y+  ++ +  +E   + R+ + + L     G+ V+P   +P+ +
Sbjct: 356 QKYHDPSQLLRHVEESDKQRTHQPFLLNIPSEGIKVEPRDKAPSPY 401


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 336  FQRPVLCQYLYFINIF 289
            FQR V+ +Y+Y+  IF
Sbjct: 1208 FQRMVVARYVYYATIF 1223


>EU019710-1|ABU25222.1|  475|Tribolium castaneum dopa decarboxylase
           protein.
          Length = 475

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -2

Query: 429 FDNAGINGKVRRRA*IWLYIDAPF 358
           FDN    G V     IWL++DA +
Sbjct: 251 FDNLEELGPVCNSNNIWLHVDAAY 274


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 8/30 (26%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
 Frame = -3

Query: 755 ITPGSNQSRYVSHNQPSDKLPFASA--NLT 672
           + P   ++   +H  P D++P+     NLT
Sbjct: 368 VNPTKTRTNLPTHRHPQDEIPYCGKIFNLT 397


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 206,197
Number of Sequences: 336
Number of extensions: 4687
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22517873
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)