Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0868
(823 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0028 - 12437332-12437576,12438436-12438537,12438619-124390... 138 7e-33
11_04_0205 + 14860857-14861534,14862585-14862975,14863069-148631... 133 1e-31
03_05_1066 + 30098780-30098866,30099139-30099225,30099318-300994... 128 5e-30
05_04_0394 - 20906923-20907146,20907251-20907340,20908380-209087... 110 1e-24
01_06_1521 + 37956131-37957204,37958560-37958962,37959370-379594... 105 3e-23
11_03_0028 - 9080650-9080667,9080701-9080794,9082099-9082185,908... 30 2.6
05_03_0190 + 9485701-9485806,9487182-9487368,9489662-9489733,949... 29 4.5
>12_02_0028 -
12437332-12437576,12438436-12438537,12438619-12439009,
12439996-12440532
Length = 424
Score = 138 bits (333), Expect = 7e-33
Identities = 59/86 (68%), Positives = 69/86 (80%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
GMP RYYGGNE IDE+E L + R+L A+ L E WGVNVQPYSGSPANFA YTG+++PH
Sbjct: 15 GMPGSRYYGGNEVIDEVEELCRARALAAFHLDPEAWGVNVQPYSGSPANFAAYTGLLQPH 74
Query: 436 GRIMGLDLPDGGHLTHGFFTATKKNL 513
RIMGLDLP GGHLTHG++TA K +
Sbjct: 75 ERIMGLDLPSGGHLTHGYYTAGGKKI 100
Score = 101 bits (243), Expect = 5e-22
Identities = 52/96 (54%), Positives = 66/96 (68%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SATSI+FES+PYKV ++G +DYDKL E A F+P+LII G S Y R DY RFR I
Sbjct: 99 KISATSIYFESLPYKVSSETGYVDYDKLEEKAMDFRPKLIICGGSAYPRDWDYARFRAIA 158
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
+ ++ MAH+SGLVAA+ PF+Y D+VTT
Sbjct: 159 DKCGAML-LCDMAHISGLVAAQEAANPFQYSDVVTT 193
>11_04_0205 +
14860857-14861534,14862585-14862975,14863069-14863170,
14863438-14863682
Length = 471
Score = 133 bits (322), Expect = 1e-31
Identities = 57/86 (66%), Positives = 68/86 (79%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
GMP RYYGGN+ IDEIE L ++R+L A+RL + WGVNVQPYSGSPA FA YT ++ PH
Sbjct: 62 GMPGARYYGGNDVIDEIENLCRDRALAAFRLDAASWGVNVQPYSGSPATFAAYTALLNPH 121
Query: 436 GRIMGLDLPDGGHLTHGFFTATKKNL 513
RIMGLDLP GGHLTHG++TA K +
Sbjct: 122 DRIMGLDLPSGGHLTHGYYTAGGKKI 147
Score = 101 bits (243), Expect = 5e-22
Identities = 52/96 (54%), Positives = 65/96 (67%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SATSI+FES+PYKV +G IDY+KL E A F+P+LII G S Y R DY + R +
Sbjct: 146 KISATSIYFESLPYKVSAATGYIDYEKLEEKALDFRPKLIICGGSAYPRDWDYAKLRAVA 205
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
+ L+ MAH+SGLVAA+ PFEYCD+VTT
Sbjct: 206 DKVGALL-LCDMAHISGLVAAQEAANPFEYCDVVTT 240
Score = 66.5 bits (155), Expect = 2e-11
Identities = 31/61 (50%), Positives = 43/61 (70%)
Frame = +2
Query: 116 ADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGTMGGMNI 295
ADP + D++ +EK RQR+G+E+IASENFTS V++ L S L NKYSE P GG ++
Sbjct: 15 ADPLVHDLLEREKRRQRSGIELIASENFTSFAVMEALGSALTNKYSEGMPGARYYGGNDV 74
Query: 296 L 298
+
Sbjct: 75 I 75
>03_05_1066 +
30098780-30098866,30099139-30099225,30099318-30099439,
30099580-30099656,30100135-30100259,30100497-30100589,
30100840-30100932,30101016-30101213,30101337-30101441,
30101535-30101600,30101808-30101885,30102144-30102233,
30102325-30102448,30102590-30102741
Length = 498
Score = 128 bits (309), Expect = 5e-30
Identities = 57/84 (67%), Positives = 65/84 (77%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P RYYGGNEYID E L Q R+LEA+RL +WGVNVQP SGSPANF VYT +++PH
Sbjct: 88 GYPGARYYGGNEYIDMAESLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPH 147
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
RIM LDLP GGHL+HG+ T TKK
Sbjct: 148 ERIMALDLPHGGHLSHGYQTDTKK 171
Score = 104 bits (250), Expect = 7e-23
Identities = 51/96 (53%), Positives = 69/96 (71%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SA SIFFE+MPY++D +GLIDYD++ ++A LF+P+LI+AG S Y+R DY R R++
Sbjct: 171 KISAVSIFFETMPYRLDESTGLIDYDQMEKSAVLFRPKLIVAGASAYARLYDYDRMRKV- 229
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
K + I MAH+SGLVAA PF+Y D+VTT
Sbjct: 230 CDKQKAILLADMAHISGLVAAGVVPSPFDYADVVTT 265
Score = 69.7 bits (163), Expect = 3e-12
Identities = 38/69 (55%), Positives = 44/69 (63%)
Frame = +2
Query: 80 MSAKLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEA 259
M K LN+ L E DPE+ DII EK RQ GLE+I SENFTSV V+Q + S + NKYSE
Sbjct: 29 MWPKQLNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEG 88
Query: 260 CPINGTMGG 286
P GG
Sbjct: 89 YPGARYYGG 97
>05_04_0394 -
20906923-20907146,20907251-20907340,20908380-20908785,
20909264-20910247
Length = 567
Score = 110 bits (265), Expect = 1e-24
Identities = 48/86 (55%), Positives = 64/86 (74%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G+P RYY GN++ID IE L +R+L A+ L WGVNVQPYS + ANFAVYTG++ P+
Sbjct: 164 GLPGARYYCGNQHIDAIERLCCDRALAAFGLDPSRWGVNVQPYSCTSANFAVYTGLLLPN 223
Query: 436 GRIMGLDLPDGGHLTHGFFTATKKNL 513
RIMGLD P GGH++HG++T + K +
Sbjct: 224 DRIMGLDSPSGGHVSHGYYTPSGKKV 249
Score = 91.9 bits (218), Expect = 6e-19
Identities = 52/113 (46%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
Frame = +3
Query: 474 SHPWFLYCY*KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRC 653
SH ++ K S SIFFE++ Y+V+P +G IDYDK+ E A F P+++I G S Y R
Sbjct: 238 SHGYYTPSGKKVSGASIFFENLSYRVNPHTGYIDYDKVEEKAVDFHPKILICGASSYPRD 297
Query: 654 LDYKRFREIRRRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIV--TTNHSLR 806
DY R R + K + MA +SGLVAA+ PF+YCDIV TT+ SLR
Sbjct: 298 WDYARMRLV-ADKCGAVLMCDMAQISGLVAAKECRNPFDYCDIVTSTTHKSLR 349
Score = 56.0 bits (129), Expect = 3e-08
Identities = 31/78 (39%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Frame = +2
Query: 50 AAKRYISSTKMSAKLLNSNLW------EADPELFDIIVKEKDRQRAGLEMIASENFTSVP 211
AAKR ++ + A+ W EADP++ +++ +E+ RQ G+E+IASEN+
Sbjct: 89 AAKRRAAAGGLEARRAAVRAWGCQPLTEADPDVHELMERERRRQAGGVELIASENYACRA 148
Query: 212 VLQCLSSCLHNKYSEACP 265
VL L S L NKYSE P
Sbjct: 149 VLDALGSHLTNKYSEGLP 166
>01_06_1521 +
37956131-37957204,37958560-37958962,37959370-37959471,
37959569-37959792
Length = 600
Score = 105 bits (253), Expect = 3e-23
Identities = 47/86 (54%), Positives = 61/86 (70%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P RYYGGN++ID IE L R+L A+ L WGVNVQPYS + AN AVYTG++ P
Sbjct: 194 GHPGARYYGGNQHIDGIERLCHERALAAFGLDPACWGVNVQPYSCTSANLAVYTGLLLPK 253
Query: 436 GRIMGLDLPDGGHLTHGFFTATKKNL 513
RIMGL+ P GGH++HG++T + K +
Sbjct: 254 DRIMGLEPPSGGHVSHGYYTPSGKKV 279
Score = 95.9 bits (228), Expect = 3e-20
Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Frame = +3
Query: 474 SHPWFLYCY*KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRC 653
SH ++ K S SIFFES+ YKV+P++G IDYDKL E A F P+++I G S Y R
Sbjct: 268 SHGYYTPSGKKVSGASIFFESLSYKVNPQTGYIDYDKLEERAMDFHPKILICGGSSYPRE 327
Query: 654 LDYKRFREIRRRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVT-TNH 797
D+ R R I K + MAH+SGLVAA+ PF+YCD+VT T H
Sbjct: 328 WDFARMRLI-ADKCGAVLMCDMAHISGLVAAKECRSPFDYCDVVTSTTH 375
Score = 57.6 bits (133), Expect = 1e-08
Identities = 31/63 (49%), Positives = 39/63 (61%)
Frame = +2
Query: 98 NSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGT 277
N L EADP++ ++ E+DRQ G+E+IASENF VL+ L S L NKYSE P
Sbjct: 141 NQALAEADPDVHALMELERDRQVRGIELIASENFVCRAVLEALGSHLTNKYSEGHPGARY 200
Query: 278 MGG 286
GG
Sbjct: 201 YGG 203
>11_03_0028 -
9080650-9080667,9080701-9080794,9082099-9082185,
9082276-9082333,9083535-9083598,9083837-9083898,
9083976-9084027,9084410-9084530,9085369-9085463
Length = 216
Score = 29.9 bits (64), Expect = 2.6
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +3
Query: 309 DTGTEQVSGSIQIKIGRMGRQCTAIFRLSGELC 407
D+G+ I I IGR G C+++ R G+ C
Sbjct: 135 DSGSGPRLDGINISIGRRGESCSSVCRAKGQSC 167
>05_03_0190 +
9485701-9485806,9487182-9487368,9489662-9489733,
9490089-9490160,9490514-9490585,9490845-9490916,
9491355-9491426,9491503-9491577,9492008-9492073,
9492144-9492188,9492276-9492340,9492429-9492811,
9492878-9493076,9493150-9493308,9493386-9493504,
9493652-9493862,9493993-9494224,9494307-9494457,
9494550-9494870
Length = 892
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 351 IGRMGRQCTAIFRLSGELCRLYRHCRTPWQD 443
+GR G++ ++ + +SGELC +T W D
Sbjct: 43 LGRWGKKASSEWNISGELCSGLASDKTNWDD 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,191,215
Number of Sequences: 37544
Number of extensions: 504762
Number of successful extensions: 1137
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1132
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2256438528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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