Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0868
(823 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effec... 135 3e-32
U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effec... 135 3e-32
Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical pr... 34 0.14
AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical ... 33 0.19
AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical ... 30 2.3
Z78018-2|CAB01447.1| 434|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical ... 29 5.3
>U00048-13|AAB53830.1| 484|Caenorhabditis elegans Maternal effect
lethal protein32, isoform a protein.
Length = 484
Score = 135 bits (327), Expect = 3e-32
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P RYYGGNE+ID++E+L Q R+LE + L +WGVNVQP SGSPANFAVYT IV +
Sbjct: 79 GYPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSN 138
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
GRIMGLDLPDGGHLTHGFFT +K
Sbjct: 139 GRIMGLDLPDGGHLTHGFFTPARK 162
Score = 119 bits (286), Expect = 3e-27
Identities = 58/96 (60%), Positives = 72/96 (75%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SATS FF+S+PYKVDP +GLIDYDKL + A LF+P+ IIAG+SCY+R LDY+RFR+I
Sbjct: 162 KVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCYARHLDYERFRKIA 221
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
+ + MAH+SGLVAA PFEY D+VTT
Sbjct: 222 TKAGAYL-MSDMAHISGLVAAGLIPSPFEYSDVVTT 256
Score = 67.7 bits (158), Expect = 9e-12
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +2
Query: 92 LLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPIN 271
+L ++ + DPE+FDI+ EK RQR GLE+IASENFTS V+ L S + NKYSE P
Sbjct: 24 ILVDHVEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGA 83
Query: 272 GTMGG 286
GG
Sbjct: 84 RYYGG 88
>U00048-12|AAL27228.1| 507|Caenorhabditis elegans Maternal effect
lethal protein32, isoform b protein.
Length = 507
Score = 135 bits (327), Expect = 3e-32
Identities = 59/84 (70%), Positives = 68/84 (80%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P RYYGGNE+ID++E+L Q R+LE + L +WGVNVQP SGSPANFAVYT IV +
Sbjct: 102 GYPGARYYGGNEFIDQMELLCQKRALEVFGLDPAKWGVNVQPLSGSPANFAVYTAIVGSN 161
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
GRIMGLDLPDGGHLTHGFFT +K
Sbjct: 162 GRIMGLDLPDGGHLTHGFFTPARK 185
Score = 119 bits (286), Expect = 3e-27
Identities = 58/96 (60%), Positives = 72/96 (75%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SATS FF+S+PYKVDP +GLIDYDKL + A LF+P+ IIAG+SCY+R LDY+RFR+I
Sbjct: 185 KVSATSEFFQSLPYKVDPTTGLIDYDKLEQNAMLFRPKAIIAGVSCYARHLDYERFRKIA 244
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
+ + MAH+SGLVAA PFEY D+VTT
Sbjct: 245 TKAGAYL-MSDMAHISGLVAAGLIPSPFEYSDVVTT 279
Score = 67.7 bits (158), Expect = 9e-12
Identities = 34/65 (52%), Positives = 43/65 (66%)
Frame = +2
Query: 92 LLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPIN 271
+L ++ + DPE+FDI+ EK RQR GLE+IASENFTS V+ L S + NKYSE P
Sbjct: 47 ILVDHVEKVDPEVFDIMKNEKKRQRRGLELIASENFTSKAVMDALGSAMCNKYSEGYPGA 106
Query: 272 GTMGG 286
GG
Sbjct: 107 RYYGG 111
>Z49887-1|CAA90058.1| 710|Caenorhabditis elegans Hypothetical
protein F09B9.1 protein.
Length = 710
Score = 33.9 bits (74), Expect = 0.14
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -3
Query: 515 SRFFLVAVKKPWVRCPP 465
+ FF +A +KPWVRCPP
Sbjct: 476 TNFFTIAYEKPWVRCPP 492
>AF101316-2|AAC69230.1| 692|Caenorhabditis elegans Hypothetical
protein F52F10.4 protein.
Length = 692
Score = 33.5 bits (73), Expect = 0.19
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = -3
Query: 518 RSRFFLVAVKKPWVRCPP 465
+++FF +A KPW+RCPP
Sbjct: 464 QTKFFNIAYSKPWIRCPP 481
>AF101316-1|AAC69231.1| 684|Caenorhabditis elegans Hypothetical
protein F52F10.3 protein.
Length = 684
Score = 29.9 bits (64), Expect = 2.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 509 FFLVAVKKPWVRCPP 465
FF + KPW+RCPP
Sbjct: 461 FFGIGYSKPWIRCPP 475
>Z78018-2|CAB01447.1| 434|Caenorhabditis elegans Hypothetical
protein W07G4.2 protein.
Length = 434
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -3
Query: 764 RLGITPGSNQSRYVSHNQPSDKLPFASANLTEPLI 660
+ I GSN ++SHN PSD L ++ + LI
Sbjct: 268 KYSILQGSNTRHFISHNSPSDDLIYSRDHCDTVLI 302
>AL110485-3|CAB60351.1| 2145|Caenorhabditis elegans Hypothetical
protein Y46G5A.4 protein.
Length = 2145
Score = 28.7 bits (61), Expect = 5.3
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = +2
Query: 125 ELFDIIVKEKDRQRAGLEMI-ASENFTSVPV 214
ELF + +KEK + RA +E+I AS F +VP+
Sbjct: 1829 ELFSMSLKEKTKTRALIEIISASSEFGNVPM 1859
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,853,192
Number of Sequences: 27780
Number of extensions: 439626
Number of successful extensions: 1023
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 997
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1021
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2029935014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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