Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0868
         (823 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding prote...    25   0.85 
AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding pro...    25   0.85 
DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.              23   2.6  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.6  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.6  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   4.5  

>AF393494-1|AAL60419.1|  144|Apis mellifera odorant binding protein
           ASP1 protein.
          Length = 144

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
 Frame = +2

Query: 122 PELFDIIVKEKDR-------QRAGLEMIASENFTSVPVLQCLSSCLHNKYS 253
           PE+FD++ ++K R        +A ++ +   N  + P + C   CL   +S
Sbjct: 32  PEVFDLVAEDKARCMSEHGTTQAQIDDVDKGNLVNEPSITCYMYCLLEAFS 82


>AF166496-1|AAD51944.1|  144|Apis mellifera pheromone-binding
           protein ASP1 protein.
          Length = 144

 Score = 25.0 bits (52), Expect = 0.85
 Identities = 13/51 (25%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
 Frame = +2

Query: 122 PELFDIIVKEKDR-------QRAGLEMIASENFTSVPVLQCLSSCLHNKYS 253
           PE+FD++ ++K R        +A ++ +   N  + P + C   CL   +S
Sbjct: 32  PEVFDLVAEDKARCMSEHGTTQAQIDDVDKGNLVNEPSITCYMYCLLEAFS 82


>DQ435327-1|ABD92642.1|  145|Apis mellifera OBP10 protein.
          Length = 145

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 804 LRSGWWSQYRSIRTARYYTWQQ 739
           +R+G W + R ++   Y  W+Q
Sbjct: 58  VRNGQWPETRQLKCYMYCLWEQ 79


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 668 PLIIETSGVTAHASDDQTRL 609
           P+I+E SGV   A D+ T L
Sbjct: 238 PVILENSGVVHVAQDESTSL 257


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.4 bits (48), Expect = 2.6
 Identities = 10/20 (50%), Positives = 13/20 (65%)
 Frame = -3

Query: 668 PLIIETSGVTAHASDDQTRL 609
           P+I+E SGV   A D+ T L
Sbjct: 238 PVILENSGVVHVAQDESTSL 257


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 4.5
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 762 PFEYCDIVTTNHSLRRC 812
           P +YCD+++ N    RC
Sbjct: 442 PGQYCDVISGNLEKGRC 458


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 243,681
Number of Sequences: 438
Number of extensions: 6005
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26217432
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)