Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0868
(823 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g32520.1 68417.m04629 glycine hydroxymethyltransferase, putat... 141 6e-34
At4g13890.1 68417.m02152 glycine hydroxymethyltransferase, putat... 138 3e-33
At4g13930.1 68417.m02156 glycine hydroxymethyltransferase, putat... 134 7e-32
At4g37930.1 68417.m05363 glycine hydroxymethyltransferase / seri... 131 6e-31
At5g26780.3 68418.m03195 glycine hydroxymethyltransferase, putat... 124 5e-29
At5g26780.2 68418.m03194 glycine hydroxymethyltransferase, putat... 124 5e-29
At5g26780.1 68418.m03193 glycine hydroxymethyltransferase, putat... 124 5e-29
At1g22020.1 68414.m02755 glycine hydroxymethyltransferase, putat... 120 1e-27
At1g36370.1 68414.m04518 glycine hydroxymethyltransferase, putat... 115 4e-26
At5g44240.1 68418.m05412 haloacid dehalogenase-like hydrolase fa... 31 0.92
At5g38120.1 68418.m04592 4-coumarate--CoA ligase family protein ... 30 1.6
At2g07749.1 68415.m00892 hypothetical protein contains Pfam prof... 29 4.9
At1g17770.1 68414.m02199 SET domain-containing protein (SUVH7) c... 28 6.5
At3g47400.1 68416.m05154 pectinesterase family protein similar t... 28 8.6
>At4g32520.1 68417.m04629 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative similar to serine
hydroxymethyltransferase [Chlamydomonas reinhardtii]
GI:17066746; contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 529
Score = 141 bits (341), Expect = 6e-34
Identities = 60/84 (71%), Positives = 71/84 (84%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G+P +RYYGGNEYID++E L QNR+L A+RL S +WGVNVQP SGSPANFAVYT I+ PH
Sbjct: 133 GLPGKRYYGGNEYIDQLETLCQNRALAAFRLDSTKWGVNVQPLSGSPANFAVYTAILSPH 192
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
RIMGLDLP GGHL+HGF TA ++
Sbjct: 193 DRIMGLDLPHGGHLSHGFMTAKRR 216
Score = 113 bits (271), Expect = 2e-25
Identities = 54/94 (57%), Positives = 68/94 (72%)
Frame = +3
Query: 510 SATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRR 689
S TSI+FESMPY++D +G++DYD L +TA LF+P+LIIAG S YSR DY R R+I
Sbjct: 218 SGTSIYFESMPYRLDESTGIVDYDMLEKTATLFRPKLIIAGASAYSRDFDYPRMRKIADS 277
Query: 690 KWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
+ + MAH+SGLVAA +PFEYCDIVTT
Sbjct: 278 VGAFL-MMDMAHISGLVAASVVADPFEYCDIVTT 310
Score = 69.3 bits (162), Expect = 3e-12
Identities = 35/60 (58%), Positives = 40/60 (66%)
Frame = +2
Query: 107 LWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGTMGG 286
L E DPE+ II KEKDRQ LE+IASENFTS V++ + SCL NKYSE P GG
Sbjct: 83 LGEVDPEVRTIITKEKDRQFRSLELIASENFTSRAVMEAVGSCLTNKYSEGLPGKRYYGG 142
>At4g13890.1 68417.m02152 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative similar to serine
hydroxymethyltransferase [Chlamydomonas reinhardtii]
GI:17066746; contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 470
Score = 138 bits (335), Expect = 3e-33
Identities = 57/86 (66%), Positives = 71/86 (82%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
GMP RYYGG E+IDEIE L ++RSLEA+ E+WGVNVQPYSGSPANFA YT +++PH
Sbjct: 62 GMPGNRYYGGTEFIDEIESLCRSRSLEAFHCNPEKWGVNVQPYSGSPANFAAYTALLQPH 121
Query: 436 GRIMGLDLPDGGHLTHGFFTATKKNL 513
RIMGLDLP GGH+THG++++ KN+
Sbjct: 122 DRIMGLDLPSGGHITHGYYSSGGKNI 147
Score = 103 bits (246), Expect = 2e-22
Identities = 52/95 (54%), Positives = 66/95 (69%)
Frame = +3
Query: 510 SATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIRRR 689
SATSI+FE++PYKVD K+G IDYDKL E A F+P+LII G + Y R DY RFR + +
Sbjct: 148 SATSIYFENLPYKVDSKTGYIDYDKLEEKAMDFRPKLIICGGTSYPREWDYARFRAVADK 207
Query: 690 KWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTTN 794
+ MAH S LVAA+ +PFEYCD+VTT+
Sbjct: 208 VGAFL-LCDMAHNSALVAAQEAADPFEYCDVVTTS 241
Score = 77.0 bits (181), Expect = 1e-14
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = +2
Query: 98 NSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGT 277
N++L DPE++D+I KEK RQ G+E+IA+ENFTSV V++ L SCL NKYSE P N
Sbjct: 9 NTHLDFVDPEIYDLIEKEKHRQCRGIELIAAENFTSVAVMEALGSCLTNKYSEGMPGNRY 68
Query: 278 MGGMNIL 298
GG +
Sbjct: 69 YGGTEFI 75
>At4g13930.1 68417.m02156 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative similar to serine
hydroxymethyltransferase [Chlamydomonas reinhardtii]
GI:17066746; contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 471
Score = 134 bits (324), Expect = 7e-32
Identities = 56/86 (65%), Positives = 69/86 (80%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G+P RYYGGNE+IDEIE L ++R+LEA+ WGVNVQPYSGSPANFA YT +++PH
Sbjct: 62 GIPGNRYYGGNEFIDEIENLCRSRALEAFHCDPAAWGVNVQPYSGSPANFAAYTALLQPH 121
Query: 436 GRIMGLDLPDGGHLTHGFFTATKKNL 513
RIMGLDLP GGHLTHG++T+ K +
Sbjct: 122 DRIMGLDLPSGGHLTHGYYTSGGKKI 147
Score = 105 bits (253), Expect = 3e-23
Identities = 55/96 (57%), Positives = 67/96 (69%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SATSI+FES+PYKV+ +G IDYDKL E A F+P+L+I G S Y R DY RFR I
Sbjct: 146 KISATSIYFESLPYKVNFTTGYIDYDKLEEKALDFRPKLLICGGSAYPRDWDYARFRAIA 205
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
+ L+ MAH+SGLVAA+ PFEYCD+VTT
Sbjct: 206 DKVGALL-LCDMAHISGLVAAQEAANPFEYCDVVTT 240
Score = 71.7 bits (168), Expect = 5e-13
Identities = 35/63 (55%), Positives = 43/63 (68%)
Frame = +2
Query: 98 NSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGT 277
N++L DPE+ D+I KEK RQ G+E+IASENFTS V++ L S L NKYSE P N
Sbjct: 9 NTSLVSVDPEIHDLIEKEKRRQCRGIELIASENFTSFAVIEALGSALTNKYSEGIPGNRY 68
Query: 278 MGG 286
GG
Sbjct: 69 YGG 71
>At4g37930.1 68417.m05363 glycine hydroxymethyltransferase / serine
hydroxymethyltransferase / serine/threonine aldolase
(SHM1) identical to serine hydroxymethyl transferase
[Arabidopsis thaliana] GI:6899945
Length = 517
Score = 131 bits (316), Expect = 6e-31
Identities = 58/84 (69%), Positives = 66/84 (78%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P RYYGGNEYID E L Q R+LEA+RL E+WGVNVQP SGSPANF VYT +++PH
Sbjct: 105 GYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYTALLKPH 164
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
RIM LDLP GGHL+HG+ T TKK
Sbjct: 165 ERIMALDLPHGGHLSHGYQTDTKK 188
Score = 104 bits (249), Expect = 8e-23
Identities = 49/96 (51%), Positives = 68/96 (70%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SA SIFFE+MPY++D +G IDYD++ ++A LF+P+LI+AG S Y+R DY R R++
Sbjct: 188 KISAVSIFFETMPYRLDESTGYIDYDQMEKSATLFRPKLIVAGASAYARLYDYARIRKV- 246
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
K + + MAH+SGLVAA PF+Y D+VTT
Sbjct: 247 CNKQKAVMLADMAHISGLVAANVIPSPFDYADVVTT 282
Score = 69.3 bits (162), Expect = 3e-12
Identities = 37/66 (56%), Positives = 43/66 (65%)
Frame = +2
Query: 89 KLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPI 268
K LN+ L E DPE+ DII EK RQ GLE+I SENFTSV V+Q + S + NKYSE P
Sbjct: 49 KQLNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPG 108
Query: 269 NGTMGG 286
GG
Sbjct: 109 ARYYGG 114
>At5g26780.3 68418.m03195 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative strong similarity to
SP|P50433 Serine hydroxymethyltransferase, mitochondrial
precursor (EC 2.1.2.1) (Serine methylase) (Glycine
hydroxymethyltransferase) (SHMT) {Solanum tuberosum};
contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 533
Score = 124 bits (300), Expect = 5e-29
Identities = 55/84 (65%), Positives = 64/84 (76%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P RYYGGNEYID E L Q R+LEA++L +WGVNVQ SGSPANF VYT +++PH
Sbjct: 105 GYPGARYYGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPH 164
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
RIM LDLP GGHL+HG+ T TKK
Sbjct: 165 ERIMALDLPHGGHLSHGYQTDTKK 188
Score = 105 bits (251), Expect = 5e-23
Identities = 51/96 (53%), Positives = 68/96 (70%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SA SIFFE+MPY++D +G IDYD+L ++A LF+P+LI+AG S Y+R DY R R++
Sbjct: 188 KISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYARIRKV- 246
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
K + + MAH+SGLVAA PFEY D+VTT
Sbjct: 247 CNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTT 282
Score = 66.9 bits (156), Expect = 2e-11
Identities = 39/83 (46%), Positives = 47/83 (56%)
Frame = +2
Query: 38 LQTFAAKRYISSTKMSAKLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVL 217
L T A S K LN++L E DPE+ DII EK RQ G E+I SENFTS+ V+
Sbjct: 32 LSTAAMAESEKSRSSWIKQLNASLDEIDPEVADIIELEKARQWKGFELIPSENFTSLSVM 91
Query: 218 QCLSSCLHNKYSEACPINGTMGG 286
Q + S + NKYSE P GG
Sbjct: 92 QAVGSVMTNKYSEGYPGARYYGG 114
>At5g26780.2 68418.m03194 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative strong similarity to
SP|P50433 Serine hydroxymethyltransferase, mitochondrial
precursor (EC 2.1.2.1) (Serine methylase) (Glycine
hydroxymethyltransferase) (SHMT) {Solanum tuberosum};
contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 533
Score = 124 bits (300), Expect = 5e-29
Identities = 55/84 (65%), Positives = 64/84 (76%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P RYYGGNEYID E L Q R+LEA++L +WGVNVQ SGSPANF VYT +++PH
Sbjct: 105 GYPGARYYGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPH 164
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
RIM LDLP GGHL+HG+ T TKK
Sbjct: 165 ERIMALDLPHGGHLSHGYQTDTKK 188
Score = 105 bits (251), Expect = 5e-23
Identities = 51/96 (53%), Positives = 68/96 (70%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SA SIFFE+MPY++D +G IDYD+L ++A LF+P+LI+AG S Y+R DY R R++
Sbjct: 188 KISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYARIRKV- 246
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
K + + MAH+SGLVAA PFEY D+VTT
Sbjct: 247 CNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTT 282
Score = 66.9 bits (156), Expect = 2e-11
Identities = 39/83 (46%), Positives = 47/83 (56%)
Frame = +2
Query: 38 LQTFAAKRYISSTKMSAKLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVL 217
L T A S K LN++L E DPE+ DII EK RQ G E+I SENFTS+ V+
Sbjct: 32 LSTAAMAESEKSRSSWIKQLNASLDEIDPEVADIIELEKARQWKGFELIPSENFTSLSVM 91
Query: 218 QCLSSCLHNKYSEACPINGTMGG 286
Q + S + NKYSE P GG
Sbjct: 92 QAVGSVMTNKYSEGYPGARYYGG 114
>At5g26780.1 68418.m03193 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative strong similarity to
SP|P50433 Serine hydroxymethyltransferase, mitochondrial
precursor (EC 2.1.2.1) (Serine methylase) (Glycine
hydroxymethyltransferase) (SHMT) {Solanum tuberosum};
contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 517
Score = 124 bits (300), Expect = 5e-29
Identities = 55/84 (65%), Positives = 64/84 (76%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
G P RYYGGNEYID E L Q R+LEA++L +WGVNVQ SGSPANF VYT +++PH
Sbjct: 105 GYPGARYYGGNEYIDMAETLCQKRALEAFQLDPSKWGVNVQSLSGSPANFQVYTALLKPH 164
Query: 436 GRIMGLDLPDGGHLTHGFFTATKK 507
RIM LDLP GGHL+HG+ T TKK
Sbjct: 165 ERIMALDLPHGGHLSHGYQTDTKK 188
Score = 105 bits (251), Expect = 5e-23
Identities = 51/96 (53%), Positives = 68/96 (70%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SA SIFFE+MPY++D +G IDYD+L ++A LF+P+LI+AG S Y+R DY R R++
Sbjct: 188 KISAVSIFFETMPYRLDENTGYIDYDQLEKSAVLFRPKLIVAGASAYARLYDYARIRKV- 246
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVTT 791
K + + MAH+SGLVAA PFEY D+VTT
Sbjct: 247 CNKQKAVMLADMAHISGLVAAGVIPSPFEYADVVTT 282
Score = 66.9 bits (156), Expect = 2e-11
Identities = 39/83 (46%), Positives = 47/83 (56%)
Frame = +2
Query: 38 LQTFAAKRYISSTKMSAKLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVL 217
L T A S K LN++L E DPE+ DII EK RQ G E+I SENFTS+ V+
Sbjct: 32 LSTAAMAESEKSRSSWIKQLNASLDEIDPEVADIIELEKARQWKGFELIPSENFTSLSVM 91
Query: 218 QCLSSCLHNKYSEACPINGTMGG 286
Q + S + NKYSE P GG
Sbjct: 92 QAVGSVMTNKYSEGYPGARYYGG 114
>At1g22020.1 68414.m02755 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative similar to serine
hydroxymethyltransferase [Chlamydomonas reinhardtii]
GI:17066746; contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 599
Score = 120 bits (289), Expect = 1e-27
Identities = 52/86 (60%), Positives = 66/86 (76%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
GMP RYY GN+YID+IEIL Q R+L A+ L E+WGVNVQPYS + ANFAV+TG++ P
Sbjct: 192 GMPGARYYTGNQYIDQIEILCQERALAAFGLNHEKWGVNVQPYSCTSANFAVFTGLLMPG 251
Query: 436 GRIMGLDLPDGGHLTHGFFTATKKNL 513
RIMGLD P GGH++HG++T K +
Sbjct: 252 ERIMGLDSPSGGHMSHGYYTPGGKKV 277
Score = 102 bits (244), Expect = 3e-22
Identities = 56/113 (49%), Positives = 73/113 (64%), Gaps = 2/113 (1%)
Frame = +3
Query: 474 SHPWFLYCY*KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRC 653
SH ++ K S SIFFES PYKVDP++G IDYDKL E A ++P+++I G S Y R
Sbjct: 266 SHGYYTPGGKKVSGASIFFESFPYKVDPRTGYIDYDKLEEKALDYRPKILICGGSSYPRD 325
Query: 654 LDYKRFREIRRRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIV--TTNHSLR 806
++ RFR I K + MA +SGLVAA+ + PF+YCDIV TT+ SLR
Sbjct: 326 WEFPRFRHI-ADKCGAVLMFDMAQISGLVAAKESPNPFDYCDIVTSTTHKSLR 377
Score = 61.7 bits (143), Expect = 6e-10
Identities = 29/56 (51%), Positives = 38/56 (67%)
Frame = +2
Query: 98 NSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACP 265
N ++ EADPE+ + + KEK RQ G+E+IASENF V++ L S L NKYSE P
Sbjct: 139 NQSIEEADPEIHEFMEKEKQRQFRGIELIASENFVCRAVMEALGSHLTNKYSEGMP 194
>At1g36370.1 68414.m04518 glycine hydroxymethyltransferase, putative
/ serine hydroxymethyltransferase, putative /
serine/threonine aldolase, putative similar to serine
hydroxymethyltransferase [Chlamydomonas reinhardtii]
GI:17066746; contains Pfam profile PF00464: serine
hydroxymethyltransferase
Length = 598
Score = 115 bits (276), Expect = 4e-26
Identities = 51/86 (59%), Positives = 65/86 (75%)
Frame = +1
Query: 256 GMPNQRYYGGNEYIDEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEPH 435
GMP RYY GN+YID+IE L R+L A+ L+S++WGVNVQPYS + ANFAVYTG++ P
Sbjct: 188 GMPGARYYTGNQYIDQIENLCIERALTAFGLESDKWGVNVQPYSCTSANFAVYTGLLLPG 247
Query: 436 GRIMGLDLPDGGHLTHGFFTATKKNL 513
RIMGLD P GGH++HG+ T K +
Sbjct: 248 ERIMGLDSPSGGHMSHGYCTPGGKKI 273
Score = 96.3 bits (229), Expect = 2e-20
Identities = 50/99 (50%), Positives = 67/99 (67%), Gaps = 1/99 (1%)
Frame = +3
Query: 504 KKSATSIFFESMPYKVDPKSGLIDYDKLAETAKLFKPRLIIAGMSCYSRCLDYKRFREIR 683
K SA SIFFES PYKV+P++G IDYDKL + A ++P+++I G S Y R D+ R R+I
Sbjct: 272 KISAASIFFESFPYKVNPQTGYIDYDKLEDKALDYRPKILICGGSSYPRDWDFARVRQI- 330
Query: 684 RRKWELI*WLIMAHVSGLVAARCNTEPFEYCDIVT-TNH 797
K + MAH+SGLVA + + PF++CDIVT T H
Sbjct: 331 ADKCGAVLMCDMAHISGLVATKECSNPFDHCDIVTSTTH 369
Score = 56.8 bits (131), Expect = 2e-08
Identities = 26/50 (52%), Positives = 35/50 (70%)
Frame = +2
Query: 116 ADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACP 265
ADP++ +++ KEK RQ G+E+IASENF V++ L S L NKYSE P
Sbjct: 141 ADPDIHELMEKEKQRQVRGIELIASENFVCRAVMEALGSHLTNKYSEGMP 190
>At5g44240.1 68418.m05412 haloacid dehalogenase-like hydrolase
family protein similar to Potential
phospholipid-transporting ATPase (EC 3.6.3.1) from {Mus
musculus} SP|P70704, {Bos taurus} SP|Q29449; contains
InterPro accession IPR005834: Haloacid dehalogenase-like
hydrolase
Length = 1107
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +1
Query: 298 DEIEILAQNRSLEAYRLKSEEWGVNVQPYSGSPANFAVYTGIVEP 432
D + +N L++ L++ EW V Y+G+ + GI EP
Sbjct: 212 DVCSLTIKNTLLQSCYLRNTEWACGVSVYTGNQTKLGMSRGIAEP 256
>At5g38120.1 68418.m04592 4-coumarate--CoA ligase family protein /
4-coumaroyl-CoA synthase family protein similar to 4CL2,
Arabidopsis thaliana [gi:12229665], 4CL1, Nicotiana
tabacum [gi:12229631]; contains Pfam AMP-binding enzyme
domain PF00501
Length = 550
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/63 (25%), Positives = 31/63 (49%)
Frame = +2
Query: 41 QTFAAKRYISSTKMSAKLLNSNLWEADPELFDIIVKEKDRQRAGLEMIASENFTSVPVLQ 220
QT+ K ++ S+LW A + D ++ + +R + ++ S N S+P++
Sbjct: 48 QTYRGKTAFIDAATDHRISFSDLWMAVDRVADCLLHDVGIRRGDVVLVLSPNTISIPIV- 106
Query: 221 CLS 229
CLS
Sbjct: 107 CLS 109
>At2g07749.1 68415.m00892 hypothetical protein contains Pfam profile
PF05919: Mitovirus RNA-dependent RNA polymerase
Length = 246
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/47 (27%), Positives = 25/47 (53%)
Frame = +2
Query: 140 IVKEKDRQRAGLEMIASENFTSVPVLQCLSSCLHNKYSEACPINGTM 280
+ K + R A ++ A+ + VPV+ L +CL + +C +NG +
Sbjct: 17 LAKRRPRFIASFDLSAATDRWPVPVIYELMACLFGQTMASCIVNGAL 63
>At1g17770.1 68414.m02199 SET domain-containing protein (SUVH7)
contains Pfam profiles: PF05033: Pre-SET motif, PF00856
SET domain; identical to cDNA SUVH7 (SUVH7) GI:13517754
Length = 693
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/42 (28%), Positives = 22/42 (52%)
Frame = +1
Query: 409 VYTGIVEPHGRIMGLDLPDGGHLTHGFFTATKKNLLRQYSLK 534
V G++ PH + + DG +L F+T T K+ +++ K
Sbjct: 329 VVRGVIHPHENNQKIYIYDGMYLVSKFWTVTGKSGFKEFRFK 370
>At3g47400.1 68416.m05154 pectinesterase family protein similar to
pectinesterase (EC 3.1.1.11) from Vitis vinifera
GI:15081598, Lycopersicon esculentum SP|Q43143
SP|P14280; contains Pfam profile PF01095 pectinesterase
Length = 594
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = -3
Query: 467 PSGKSNPIILPWGSTMPV*TAKFAGEPEYGCTLTPHSSDFNLY 339
PS S P P + P+ +G+ + C TPH+ N Y
Sbjct: 58 PSTTSPPSPGPVAAPSPINNGSVSGDMTWWCNKTPHAETCNYY 100
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,736,144
Number of Sequences: 28952
Number of extensions: 410659
Number of successful extensions: 977
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 928
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 968
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1882599200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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