Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0867
         (655 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF125954-5|AAD14708.2|  338|Caenorhabditis elegans Seven tm rece...    31   0.71 
AC006769-6|AAF60582.1|  274|Caenorhabditis elegans Hypothetical ...    31   0.71 
Z49887-1|CAA90058.1|  710|Caenorhabditis elegans Hypothetical pr...    28   5.0  
U41022-2|AAA82339.2|  373|Caenorhabditis elegans Hypothetical pr...    27   8.8  

>AF125954-5|AAD14708.2|  338|Caenorhabditis elegans Seven tm
           receptor protein 120 protein.
          Length = 338

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
 Frame = -1

Query: 229 YFTLIFILHSFLC--F*RAETLRFGFLVRDCLSVL---LSLPVK-LNGT--IFYIKSTK* 74
           +FTL+F++H+     F   + L   F +   L  L   L+ P+  ++GT  + Y+ +T  
Sbjct: 22  HFTLLFLIHTRATRHFGSYKLLMASFSIFSILYALVEVLTQPIMHISGTGLMLYVGTTFL 81

Query: 73  AISNTFNHYIATGFCLT 23
            IS  F H+IA  +C T
Sbjct: 82  PISKEFGHFIAAFYCST 98


>AC006769-6|AAF60582.1|  274|Caenorhabditis elegans Hypothetical
           protein Y45G12C.6 protein.
          Length = 274

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 8/77 (10%)
 Frame = -1

Query: 229 YFTLIFILHSFLC--F*RAETLRFGFLVRDCLSVL---LSLPVK-LNGT--IFYIKSTK* 74
           +FTL+F++H+     F   + L   F +   L  L   L+ P+  ++GT  + Y+ +T  
Sbjct: 22  HFTLLFLIHTRATRHFGSYKLLMASFSIFSILYALVEVLTQPIMHISGTGLMLYVGTTFL 81

Query: 73  AISNTFNHYIATGFCLT 23
            IS  F H+IA  +C T
Sbjct: 82  PISKEFGHFIAAFYCST 98


>Z49887-1|CAA90058.1|  710|Caenorhabditis elegans Hypothetical
           protein F09B9.1 protein.
          Length = 710

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = -2

Query: 198 FCVFNALRHYGSVFSCATACQFFLVFPLNLMALYFT 91
           F   N++  YG  +  A   Q +LV P+ L+ LYF+
Sbjct: 402 FASSNSMGCYGPTWYLAVDTQLYLVAPIVLIGLYFS 437


>U41022-2|AAA82339.2|  373|Caenorhabditis elegans Hypothetical
           protein K08B5.1 protein.
          Length = 373

 Score = 27.5 bits (58), Expect = 8.8
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = -1

Query: 580 YRRYDDEPTYNXVYVSIQIYVSSLTMY 500
           YR Y  +PT   + V +Q+ VSS+  +
Sbjct: 141 YRNYSPKPTLGSILVVVQVLVSSIPFW 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,193,481
Number of Sequences: 27780
Number of extensions: 244433
Number of successful extensions: 522
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 522
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)