Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0866
         (777 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       24   1.2  
DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory pro...    23   3.6  
DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory pro...    23   3.6  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.6  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    22   6.3  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    22   6.3  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    22   6.3  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    21   8.3  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.3  

>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 11/19 (57%), Positives = 13/19 (68%)
 Frame = +1

Query: 631 EQKFMETTLTSVSSPLSAP 687
           E+K METTLT  +SP   P
Sbjct: 122 EEKDMETTLTPCASPNRKP 140


>DQ855504-1|ABH88191.1|  124|Tribolium castaneum chemosensory
           protein 18 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -2

Query: 377 NCS-ERRKFVPDGKNLSEKVPEA 312
           NC  ++ +  P+GK L   +PEA
Sbjct: 43  NCLLDKGRCTPEGKKLKSTIPEA 65


>DQ855497-1|ABH88184.1|  127|Tribolium castaneum chemosensory
           protein 11 protein.
          Length = 127

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
 Frame = -2

Query: 377 NCS-ERRKFVPDGKNLSEKVPEA-GTEVPWC 291
           NC  E+ K  PDG  L   +P+A  TE   C
Sbjct: 48  NCLLEKGKCTPDGAELKRHLPDALHTECSKC 78


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = +1

Query: 526 LTTFPLRWAGNPGSGYGATPALHSS 600
           L TF   WA +  S    TP LH S
Sbjct: 297 LPTFGRAWAMDDESDINGTPPLHIS 321


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -2

Query: 377 NCS-ERRKFVPDGKNLSEKVPEA 312
           NC  E++   PDG+ L   +P+A
Sbjct: 47  NCLLEKKPCTPDGEELKRVLPDA 69


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = -2

Query: 368 ERRKFVPDGKNLSEKVPEA 312
           E+ K  P+G+ L + +P+A
Sbjct: 48  EKGKCTPEGEELKKDIPDA 66


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 10/23 (43%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = -2

Query: 377 NC-SERRKFVPDGKNLSEKVPEA 312
           NC  ER    PDG+ L + +P+A
Sbjct: 48  NCLMERGTCSPDGEELKKALPDA 70


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/28 (35%), Positives = 13/28 (46%)
 Frame = +1

Query: 265 HPRSNLEPGHHGTSVPASGTFSDRFFPS 348
           HP+  L PG +  S+   G      FPS
Sbjct: 119 HPQVLLSPGGYSGSLCDQGFAQQPMFPS 146


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 475 PD*HRRNRSSTKPQPPS 425
           P  +  N+SST P PP+
Sbjct: 60  PSGNTPNKSSTSPYPPN 76


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,332
Number of Sequences: 336
Number of extensions: 4138
Number of successful extensions: 21
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)