Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0866
         (777 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    28   0.37 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    28   0.37 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   2.3  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     23   8.0  

>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 27.9 bits (59), Expect = 0.37
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +1

Query: 70  MREIVHLQAGQCGNQIGAKFWE-IISXRARHRPHRC 174
           MRE + +  GQ G QIG   W+  +   A +R  RC
Sbjct: 1   MRECISVHVGQAGVQIGNPCWDCTVWSMASNRTVRC 36


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 27.9 bits (59), Expect = 0.37
 Identities = 15/44 (34%), Positives = 23/44 (52%)
 Frame = -1

Query: 381  PELFRKTKVCSGRKESVRKGSRSRYRSSMVPGLQVRTRMAAGAR 250
            P   RK ++ S  ++S     RSR RS    G + R+R  +G+R
Sbjct: 1043 PATKRKRRIASDEEDSDGSQRRSRSRSRSGSGSRSRSRSGSGSR 1086


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 22.6 bits (46), Expect(2) = 2.3
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 556 NPGSGYGATPALHSSKDSRXKSNPPEQKFMETT 654
           N G G G       S++   +S PP+Q  M  T
Sbjct: 528 NGGGGGGGGGGREGSQEWNSRSRPPQQHSMLRT 560



 Score = 20.6 bits (41), Expect(2) = 2.3
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 631 EQKFMETTLTSVSSPLSAPKKL 696
           ++K     L S +SPL +P K+
Sbjct: 582 QEKDRPNALASPASPLKSPSKI 603


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 4/22 (18%)
 Frame = +2

Query: 668 VPPFRPP----KSYSGTTWFVR 721
           +PPFRPP      + G  W++R
Sbjct: 89  IPPFRPPWHPRPPFGGRPWWLR 110


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 833,634
Number of Sequences: 2352
Number of extensions: 18730
Number of successful extensions: 108
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 107
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)