Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0866
(777 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 62 6e-10
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 62 6e-10
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 58 5e-09
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 58 7e-09
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 56 4e-08
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 56 4e-08
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 49 4e-06
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 49 4e-06
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 31 0.70
AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain (... 31 0.70
AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical ... 31 0.70
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 31 0.92
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 31 0.92
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 31 0.92
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 31 0.92
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 31 0.92
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 31 0.92
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 31 1.2
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 31 1.2
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 31 1.2
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 30 2.1
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 29 4.9
CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical ... 29 4.9
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 28 8.6
AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical ... 28 8.6
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 61.7 bits (143), Expect = 6e-10
Identities = 43/100 (43%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLPWGL*LAVGDASMYTNNEASGGQV 249
MREIVH+QAGQCGNQIGAKFWE+IS +P L + ++Y NEA+GG+
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVY-YNEANGGKY 59
Query: 250 TCPGGHPRS---NLEPGHHGTSVPASGTFSDRFFPSGTNF 360
PR+ +LEPG + SG F F P F
Sbjct: 60 V-----PRAVLVDLEPGTMDS--VRSGPFGQLFRPDNFVF 92
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 61.7 bits (143), Expect = 6e-10
Identities = 46/100 (46%), Positives = 54/100 (54%), Gaps = 3/100 (3%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLPWGL*LAVGDASMYTNNEASGGQV 249
MREIVH+QAGQCGNQIGAKFWE+IS P L + ++Y NEASGG+
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVY-YNEASGGKY 59
Query: 250 TCPGGHPRS---NLEPGHHGTSVPASGTFSDRFFPSGTNF 360
PR+ +LEPG SV A G F F P F
Sbjct: 60 V-----PRACLVDLEPGTM-DSVRA-GPFGQLFRPDNFVF 92
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 58.4 bits (135), Expect = 5e-09
Identities = 41/100 (41%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLPWGL*LAVGDASMYTNNEASGGQV 249
MREIVH+QAGQCGNQIG+KFWE+IS +P L + +Y NEA+ G+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVY-YNEANNGKY 59
Query: 250 TCPGGHPRS---NLEPGHHGTSVPASGTFSDRFFPSGTNF 360
PR+ +LEPG + SG F F P F
Sbjct: 60 V-----PRAVLVDLEPGTMDS--VRSGPFGQLFRPDNFVF 92
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 58.0 bits (134), Expect = 7e-09
Identities = 41/100 (41%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLPWGL*LAVGDASMYTNNEASGGQV 249
MREIVH+QAGQCGNQIG+KFWE+IS +P L + +Y NEA+ G+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVY-YNEANNGKY 59
Query: 250 TCPGGHPRS---NLEPGHHGTSVPASGTFSDRFFPSGTNF 360
PR+ +LEPG + SG F F P F
Sbjct: 60 V-----PRAVLVDLEPGTMDS--VRSGPFGQLFRPDNFVF 92
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 55.6 bits (128), Expect = 4e-08
Identities = 22/25 (88%), Positives = 25/25 (100%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIIS 144
MREIVH+QAGQCGNQIG+KFWE+IS
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVIS 25
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 152 HGIDPTGAYHGDSDLQLE 205
HGIDP+G Y GDSDLQLE
Sbjct: 28 HGIDPSGQYVGDSDLQLE 45
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 55.6 bits (128), Expect = 4e-08
Identities = 22/25 (88%), Positives = 25/25 (100%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIIS 144
MREIVH+QAGQCGNQIG+KFWE+IS
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVIS 25
Score = 36.7 bits (81), Expect = 0.018
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 152 HGIDPTGAYHGDSDLQLE 205
HGIDP+G Y GDSDLQLE
Sbjct: 28 HGIDPSGQYVGDSDLQLE 45
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIIS 144
M+EI+++Q GQCGNQIGAKFWE IS
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYIS 25
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/25 (76%), Positives = 23/25 (92%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIIS 144
M+EI+++Q GQCGNQIGAKFWE IS
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYIS 25
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 31.5 bits (68), Expect = 0.70
Identities = 19/51 (37%), Positives = 22/51 (43%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLPWGL*LAVGDASMYT 222
MREIV + GQ G QIG WE+ P +P V D S T
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNT 51
>AC006742-7|ABB51176.1| 1434|Caenorhabditis elegans Ferm domain
(protein4.1-ezrin-radixin-moesin) family protein 5
protein.
Length = 1434
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 577 ATPALHSSKDSRXKSNPPEQKFMETTLTSVSSPLSAPKKLFRNNLVRSKPLN 732
A PA ++ D+ ++PP + L + SPL ++ R N R KP N
Sbjct: 254 AIPAFDNAYDADFDNSPPLHHYSAVHLETGLSPLEEAQRALRANRARHKPSN 305
>AC006742-1|AAF60499.2| 1393|Caenorhabditis elegans Hypothetical
protein Y38C1AB.4 protein.
Length = 1393
Score = 31.5 bits (68), Expect = 0.70
Identities = 16/52 (30%), Positives = 25/52 (48%)
Frame = +1
Query: 577 ATPALHSSKDSRXKSNPPEQKFMETTLTSVSSPLSAPKKLFRNNLVRSKPLN 732
A PA ++ D+ ++PP + L + SPL ++ R N R KP N
Sbjct: 254 AIPAFDNAYDADFDNSPPLHHYSAVHLETGLSPLEEAQRALRANRARHKPSN 305
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLP 180
MRE++ + GQ G QIG WE+ +P +P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMP 37
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLP 180
MRE++ + GQ G QIG WE+ +P +P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMP 37
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLP 180
MRE++ + GQ G QIG WE+ +P +P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMP 37
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLP 180
MRE++ + GQ G QIG WE+ +P +P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMP 37
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLP 180
MRE++ + GQ G QIG WE+ +P +P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMP 37
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLP 180
MRE++ + GQ G QIG WE+ +P +P
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMP 37
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLPWGL*LAVGDASMYT 222
MRE++ + GQ G QIG WE+ +P +P L D S T
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFST 51
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLPWGL*LAVGDASMYT 222
MRE++ + GQ G QIG WE+ +P +P L D S T
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFST 51
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/51 (33%), Positives = 23/51 (45%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLPWGL*LAVGDASMYT 222
MRE++ + GQ G QIG WE+ +P +P L D S T
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFST 51
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 70 MREIVHLQAGQCGNQIGAKFWEI 138
MRE++ + GQ G QIG WE+
Sbjct: 1 MREVISIHVGQAGVQIGNACWEL 23
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = +1
Query: 73 REIVHLQAGQCGNQIGAKFWEIISXRARHRPHRCLPWGL*LAVGDASMYT 222
RE++ + GQ G QIG WE+ +P +P L D S T
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFST 50
>CU457740-4|CAM36334.1| 735|Caenorhabditis elegans Hypothetical
protein C50E10.4 protein.
Length = 735
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/50 (28%), Positives = 22/50 (44%)
Frame = -2
Query: 332 SEKVPEAGTEVPWCPGSKFERGWPPGHVTXPPEASLLVYIDASPTASQSP 183
+EK+P+ P P + + PP + PP+A AS + SP
Sbjct: 461 AEKIPKRSEAAPEVPATATTKEAPPSTSSSPPDAPATPATPASSDSRDSP 510
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 73 REIVHLQAGQCGNQIGAKFWEI 138
RE++ + GQ G QIG WE+
Sbjct: 8 REVISIHVGQAGVQIGNACWEL 29
>AF106591-1|AAD47131.2| 710|Caenorhabditis elegans Hypothetical
protein T01A4.3 protein.
Length = 710
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = -3
Query: 460 RNRSSTKPQPPSVVSCSLGPSLFAQPXGTVPKDESLFRTERICPKRFQKPVQK 302
+N+ ST CS+ P +F K SL + RI QKP QK
Sbjct: 559 KNQDSTSVSDTMTCRCSMKPCVFYLDSLPAAKTPSLTQLRRIVVLMQQKPSQK 611
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,473,696
Number of Sequences: 27780
Number of extensions: 416816
Number of successful extensions: 1178
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1034
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1173
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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