Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0865
         (642 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9YVM2 Cluster: Putative uncharacterized protein MSV220...    35   1.5  
UniRef50_Q5CGA9 Cluster: Putative uncharacterized protein; n=2; ...    33   5.9  
UniRef50_Q4T9M9 Cluster: Chromosome undetermined SCAF7533, whole...    33   7.7  

>UniRef50_Q9YVM2 Cluster: Putative uncharacterized protein MSV220;
           n=1; Melanoplus sanguinipes entomopoxvirus|Rep: Putative
           uncharacterized protein MSV220 - Melanoplus sanguinipes
           entomopoxvirus (MsEPV)
          Length = 120

 Score = 35.1 bits (77), Expect = 1.5
 Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
 Frame = +2

Query: 32  HSNLHHLF--IFKYKNYDFIKLHCSHRVKKYIIHHSETLD 145
           +SN   LF  I+KY+NY+ +  H S  +K YI+H+    D
Sbjct: 56  NSNYKELFKKIYKYRNYEHLINHYSEIIKNYILHNYSLFD 95


>UniRef50_Q5CGA9 Cluster: Putative uncharacterized protein; n=2;
           Cryptosporidium|Rep: Putative uncharacterized protein -
           Cryptosporidium hominis
          Length = 378

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +2

Query: 5   QKSSLTSISHSNLHHLFIFKYKNYDFIKLHCSHRVKKYI 121
           Q S +T   +SN +  ++ KYKNY+ I +H       Y+
Sbjct: 31  QNSGITPREYSNYYRFYVNKYKNYNSINIHSVQSNNDYL 69


>UniRef50_Q4T9M9 Cluster: Chromosome undetermined SCAF7533, whole
           genome shotgun sequence; n=2; Tetraodontidae|Rep:
           Chromosome undetermined SCAF7533, whole genome shotgun
           sequence - Tetraodon nigroviridis (Green puffer)
          Length = 646

 Score = 32.7 bits (71), Expect = 7.7
 Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
 Frame = +2

Query: 50  LFIFKYKNYDFIKLHCSHRVKKYIIHHSETL-DIRGISNNA 169
           L +FKYK  D +K+H S  + +Y+   ++T+ D R +SN A
Sbjct: 547 LALFKYKEDDILKIHSSVELYQYLRFFTKTITDTRRLSNMA 587


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 553,572,221
Number of Sequences: 1657284
Number of extensions: 9824999
Number of successful extensions: 21965
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 21280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21964
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 48126133708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)