Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0865
         (642 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    28   0.29 
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.7  
DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.    24   3.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   6.2  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   6.2  

>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
            protein.
          Length = 988

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +2

Query: 215  GHAVDDCSNVGYTCPRDVRFTRTTQGTCATYVT 313
            G AV+D  +V + CPR  R     Q  C + VT
Sbjct: 942  GDAVEDVEHVLFHCPRSDRIRNEMQQRCHSRVT 974


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 24.6 bits (51), Expect = 2.7
 Identities = 13/38 (34%), Positives = 20/38 (52%)
 Frame = -2

Query: 485 NVYTIALRTLCSHA*FG*GRFLLDSTDDGTPSLENDGV 372
           N++  AL +   H      R +L+STD    SL +DG+
Sbjct: 425 NIHLHALFSAVEHGHLEKARTILESTDVDVNSLNSDGL 462


>DQ004399-1|AAY21238.1|  847|Anopheles gambiae lysozyme c-6 protein.
          Length = 847

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = -2

Query: 263 RGGTCSLRCCNHPPRDLKDDVTDCERVL 180
           +G  C L C +    DL DDV +C + +
Sbjct: 722 KGWVCGLSCADLEDNDLTDDV-ECMKTI 748


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 50   LFIFKYKNYDFIKLHCSHRVKKYIIHHSETLDI 148
            LF+  +K Y   +LH  H   K+ +H   T+D+
Sbjct: 931  LFLDGFKMY--ARLHLLHLNWKHEVHRQSTIDV 961


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 6.2
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 50   LFIFKYKNYDFIKLHCSHRVKKYIIHHSETLDI 148
            LF+  +K Y   +LH  H   K+ +H   T+D+
Sbjct: 932  LFLDGFKMY--ARLHLLHLNWKHEVHRQSTIDV 962


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 606,541
Number of Sequences: 2352
Number of extensions: 11677
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63141405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)