Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0865
         (642 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023510-1|AAY84910.1| 1248|Drosophila melanogaster LD09533p pro...    29   5.4  
AF145645-1|AAD38620.1|  835|Drosophila melanogaster BcDNA.GH0777...    29   5.4  
AE014134-1852|AAF52924.1| 1248|Drosophila melanogaster CG5366-PA...    29   5.4  
M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 cha...    29   7.1  
M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein ( D.me...    29   7.1  
BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p pro...    29   7.1  
AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p pro...    29   7.1  
AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB...    29   7.1  
AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA...    29   7.1  

>BT023510-1|AAY84910.1| 1248|Drosophila melanogaster LD09533p
           protein.
          Length = 1248

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +2

Query: 17  LTSISHSNLHHLFIFKYKNYDFIKLHCSHRVKKYIIHHSETLD 145
           LT I H  L  L  F  KN+  +KLH    + K +I++S   +
Sbjct: 643 LTPILHDVLPALGTFLRKNHRALKLHSLDLINKIVINYSSNFE 685


>AF145645-1|AAD38620.1|  835|Drosophila melanogaster BcDNA.GH07774
           protein.
          Length = 835

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +2

Query: 17  LTSISHSNLHHLFIFKYKNYDFIKLHCSHRVKKYIIHHSETLD 145
           LT I H  L  L  F  KN+  +KLH    + K +I++S   +
Sbjct: 230 LTPILHDVLPALGTFLRKNHRALKLHSLDLINKIVINYSSNFE 272


>AE014134-1852|AAF52924.1| 1248|Drosophila melanogaster CG5366-PA
           protein.
          Length = 1248

 Score = 29.1 bits (62), Expect = 5.4
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +2

Query: 17  LTSISHSNLHHLFIFKYKNYDFIKLHCSHRVKKYIIHHSETLD 145
           LT I H  L  L  F  KN+  +KLH    + K +I++S   +
Sbjct: 643 LTPILHDVLPALGTFLRKNHRALKLHSLDLINKIVINYSSNFE 685


>M95811-1|AAD19752.1| 1788|Drosophila melanogaster laminin B1 chain
            protein.
          Length = 1788

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 260  GGTCS-LRCCNHPPRDLKDDVTDCERVLSACLRC 162
            GGTCS   C N+   DL D   +C+R   ACL+C
Sbjct: 985  GGTCSKCECSNNV--DLYD-TGNCDRQTGACLKC 1015


>M19525-1|AAA28663.1| 1788|Drosophila melanogaster protein (
            D.melanogaster lamininB1 subunit mRNA, complete cds. ).
          Length = 1788

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 260  GGTCS-LRCCNHPPRDLKDDVTDCERVLSACLRC 162
            GGTCS   C N+   DL D   +C+R   ACL+C
Sbjct: 985  GGTCSKCECSNNV--DLYD-TGNCDRQTGACLKC 1015


>BT015222-1|AAT94451.1| 1296|Drosophila melanogaster RE35801p
           protein.
          Length = 1296

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 260 GGTCS-LRCCNHPPRDLKDDVTDCERVLSACLRC 162
           GGTCS   C N+   DL D   +C+R   ACL+C
Sbjct: 493 GGTCSKCECSNNV--DLYD-TGNCDRQTGACLKC 523


>AY095001-1|AAM11329.1| 1026|Drosophila melanogaster GH02457p
           protein.
          Length = 1026

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 260 GGTCS-LRCCNHPPRDLKDDVTDCERVLSACLRC 162
           GGTCS   C N+   DL D   +C+R   ACL+C
Sbjct: 223 GGTCSKCECSNNV--DLYD-TGNCDRQTGACLKC 253


>AE014134-1348|AAN10647.1| 1788|Drosophila melanogaster CG7123-PB,
            isoform B protein.
          Length = 1788

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 260  GGTCS-LRCCNHPPRDLKDDVTDCERVLSACLRC 162
            GGTCS   C N+   DL D   +C+R   ACL+C
Sbjct: 985  GGTCSKCECSNNV--DLYD-TGNCDRQTGACLKC 1015


>AE014134-1347|AAF52563.1| 1788|Drosophila melanogaster CG7123-PA,
            isoform A protein.
          Length = 1788

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = -2

Query: 260  GGTCS-LRCCNHPPRDLKDDVTDCERVLSACLRC 162
            GGTCS   C N+   DL D   +C+R   ACL+C
Sbjct: 985  GGTCSKCECSNNV--DLYD-TGNCDRQTGACLKC 1015


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,395,330
Number of Sequences: 53049
Number of extensions: 484860
Number of successful extensions: 1157
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1113
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1157
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2703623850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)