Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0863
         (685 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BX538080-1|CAD98004.1|  175|Homo sapiens hypothetical protein pr...    31   5.0  
BC117673-1|AAI17674.1|  905|Homo sapiens CAPRIN2 protein protein.      31   5.0  
BC117672-1|AAI17673.1|  960|Homo sapiens CAPRIN2 protein protein.      30   8.8  
AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein.                30   8.8  
AF525416-1|AAP80792.1|  504|Homo sapiens unnamed C1q domain prot...    30   8.8  

>BX538080-1|CAD98004.1|  175|Homo sapiens hypothetical protein
           protein.
          Length = 175

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = -2

Query: 243 SPKKRQTSIYQPKLWPNISQGTRHSGCTASCNQL*SPYCFPNWYE-CSSLRGLTSPLNVF 67
           S +  QT+++     P ++      GCT     + + Y  P  Y+   + RGL S  N  
Sbjct: 53  SQETAQTNVFPRPTQPFVNSRGSVRGCTRGGRLITNSYRSPGGYKGFDTYRGLPSISNGN 112

Query: 66  YALLQYNAKLY 34
           Y+ LQ+ A+ Y
Sbjct: 113 YSQLQFQAREY 123


>BC117673-1|AAI17674.1|  905|Homo sapiens CAPRIN2 protein protein.
          Length = 905

 Score = 30.7 bits (66), Expect = 5.0
 Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 1/71 (1%)
 Frame = -2

Query: 243 SPKKRQTSIYQPKLWPNISQGTRHSGCTASCNQL*SPYCFPNWYE-CSSLRGLTSPLNVF 67
           S +  QT+++     P ++      GCT     + + Y  P  Y+   + RGL S  N  
Sbjct: 783 SQETAQTNVFPRPTQPFVNSRGSVRGCTRGGRLITNSYRSPGGYKGFDTYRGLPSISNGN 842

Query: 66  YALLQYNAKLY 34
           Y+ LQ+ A+ Y
Sbjct: 843 YSQLQFQAREY 853


>BC117672-1|AAI17673.1|  960|Homo sapiens CAPRIN2 protein protein.
          Length = 960

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = -2

Query: 228  QTSIYQPKLWPNISQGTRHSGCTASCNQL*SPYCFPNWYE-CSSLRGLTSPLNVFYALLQ 52
            QT+++     P ++      GCT     + + Y  P  Y+   + RGL S  N  Y+ LQ
Sbjct: 843  QTNVFPRPTQPFVNSRGSVRGCTRGGRLITNSYRSPGGYKGFDTYRGLPSISNGNYSQLQ 902

Query: 51   YNAKLY 34
            + A+ Y
Sbjct: 903  FQAREY 908


>AY074490-1|AAL71549.1| 1077|Homo sapiens EEG1L protein.
          Length = 1077

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = -2

Query: 228 QTSIYQPKLWPNISQGTRHSGCTASCNQL*SPYCFPNWYE-CSSLRGLTSPLNVFYALLQ 52
           QT+++     P ++      GCT     + + Y  P  Y+   + RGL S  N  Y+ LQ
Sbjct: 794 QTNVFPRPTQPFVNSRGSVRGCTRGGRLITNSYRSPGGYKGFDTYRGLPSISNGNYSQLQ 853

Query: 51  YNAKLY 34
           + A+ Y
Sbjct: 854 FQAREY 859


>AF525416-1|AAP80792.1|  504|Homo sapiens unnamed C1q domain protein
           protein.
          Length = 504

 Score = 29.9 bits (64), Expect = 8.8
 Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
 Frame = -2

Query: 228 QTSIYQPKLWPNISQGTRHSGCTASCNQL*SPYCFPNWYE-CSSLRGLTSPLNVFYALLQ 52
           QT+++     P ++      GCT     + + Y  P  Y+   + RGL S  N  Y+ LQ
Sbjct: 221 QTNVFPRPTQPFVNSRGSVRGCTRGGRLITNSYRSPGGYKGFDTYRGLPSISNGNYSQLQ 280

Query: 51  YNAKLY 34
           + A+ Y
Sbjct: 281 FQAREY 286


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,745,853
Number of Sequences: 237096
Number of extensions: 2072373
Number of successful extensions: 3968
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3968
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7783251346
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)