Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0862
(618 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 156 3e-39
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 153 3e-38
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 97 2e-21
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 66 4e-12
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 31 0.13
SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces po... 29 0.54
SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr... 29 0.71
SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr 1|||... 27 2.2
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 26 5.0
SPBC119.07 |ppk19||serine/threonine protein kinase Ppk19|Schizos... 25 6.6
SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces pom... 25 6.6
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 25 6.6
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 25 8.8
SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2 |Schizos... 25 8.8
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 156 bits (378), Expect = 3e-39
Identities = 67/98 (68%), Positives = 81/98 (82%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F GK+VPR+++VDLEP V+D+VRTG YR LFHPEQLITGKEDA+NNYARGHY
Sbjct: 49 FSTFFSETGQGKYVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
T+GKE+VD V D+IR++AD C+GLQ FL+FHSFG TG
Sbjct: 109 TVGKELVDEVTDKIRRIADNCSGLQGFLVFHSFGGGTG 146
Score = 93.9 bits (223), Expect = 2e-20
Identities = 41/63 (65%), Positives = 45/63 (71%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE IS+HVGQAG QIGNACWELYCLEHGIQP+G M + D F+TFFSETG
Sbjct: 1 MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGK 60
Query: 263 TYP 271
P
Sbjct: 61 YVP 63
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 153 bits (370), Expect = 3e-38
Identities = 64/98 (65%), Positives = 81/98 (82%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F GK VPR+++VDLEP V+D+VRTG Y+ LFHPEQ++TGKEDA+NNYARGHY
Sbjct: 53 FGTFFSETGQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHY 112
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
T+GKE++D VL+RIR++AD C+GLQ FL+FHSFG TG
Sbjct: 113 TVGKEMIDSVLERIRRMADNCSGLQGFLVFHSFGGGTG 150
Score = 87.8 bits (208), Expect = 1e-18
Identities = 45/68 (66%), Positives = 47/68 (69%), Gaps = 5/68 (7%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTD-----KTIGGGDDSFNTFFSE 247
MRE ISVHVGQAGVQIGNACWELYCLEHGI PDG PT+ K +D F TFFSE
Sbjct: 1 MREVISVHVGQAGVQIGNACWELYCLEHGIGPDG-FPTENSEVHKNNSYLNDGFGTFFSE 59
Query: 248 TGVASTYP 271
TG P
Sbjct: 60 TGQGKFVP 67
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 96.7 bits (230), Expect = 2e-21
Identities = 44/88 (50%), Positives = 59/88 (67%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
GK+VPRAV VDLEP +D V++G + LF P+ +I G+ A N +A+GHYT G E+ D V
Sbjct: 57 GKYVPRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAV 116
Query: 436 LDRIRKLADQCTGLQRFLIFHSFGEVTG 519
LD +R+ A+ C LQ F + HS G TG
Sbjct: 117 LDVVRREAEACDALQGFQLTHSLGGGTG 144
Score = 35.1 bits (77), Expect = 0.008
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRE + + GQ G Q+G A W EHG+ G T + N +F+E
Sbjct: 1 MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIY--HGTSEAQHERLNVYFNEAAGGK 58
Query: 263 TYP 271
P
Sbjct: 59 YVP 61
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 66.1 bits (154), Expect = 4e-12
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 2/97 (2%)
Frame = +1
Query: 235 FLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYT 408
F Q D + +++PRA+ +DLEP VV+ + + TY L++PE ++ K A NN+A G Y+
Sbjct: 52 FYQSDDT-RYIPRAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YS 109
Query: 409 IGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
+ I + ++D I + AD L+ F + HS TG
Sbjct: 110 HAERIFEDIMDMIDREADGSDSLEGFSLLHSIAGGTG 146
Score = 48.8 bits (111), Expect = 6e-07
Identities = 24/55 (43%), Positives = 33/55 (60%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSET 250
RE I++ GQ G QIG+ W+ CLEHGI PDG + + T G D + FF ++
Sbjct: 3 REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFAT--EGVDRKDVFFYQS 55
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 31.1 bits (67), Expect = 0.13
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = -2
Query: 596 ELPSFKLLARSQRRDAPINKESEPQKPVTSPKEWKIRNLCRPVH 465
E P F+L P +K SEP KP S + W +R P+H
Sbjct: 378 EAPLFELSVSMPLTLIPPSKFSEPVKPELSSEAWLLRTEMSPLH 421
>SPBC354.07c |||oxysterol binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 399
Score = 29.1 bits (62), Expect = 0.54
Identities = 15/58 (25%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Frame = -1
Query: 351 FWMKQLSVCASADLINNSRF--KIDEDSTGYVLATPVSLKKVLKESSPPPMVLSVGIW 184
F + + S +++N+ + KID GY T S K + E + P + G+W
Sbjct: 205 FMAPYIELYGSTYIVSNTNYITKIDYSGRGYFRGTKNSFKATIFEKNEDPDYIVEGVW 262
>SPCC576.05 |||nucear export factor|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1024
Score = 28.7 bits (61), Expect = 0.71
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 318 ADLINNSRFKIDEDSTGYVLATPVSLKKVLKESSPPPM 205
AD+IN SR+ ID S +T + L P P+
Sbjct: 455 ADIINGSRYNIDRVSPNTAFSTNIPLSLPFANKEPQPI 492
>SPAC1610.03c |crp79|meu5|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 710
Score = 27.1 bits (57), Expect = 2.2
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -3
Query: 610 PG*MANSQVLNFLPVVNGETLPSIRKVNPRSPLP 509
PG + SQ+ F+P V ++R +N R+P P
Sbjct: 144 PG-LKQSQIKEFIPNVEERNWETVRGINSRNPKP 176
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 25.8 bits (54), Expect = 5.0
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = +1
Query: 181 WPDAHRQDHRGWRRFFQHFLQR 246
W A R D R R FQHFLQR
Sbjct: 590 WLAACRSDPRCRRLDFQHFLQR 611
>SPBC119.07 |ppk19||serine/threonine protein kinase
Ppk19|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1706
Score = 25.4 bits (53), Expect = 6.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +1
Query: 184 PDAHRQDHRGWRRFFQHFLQRDRSGKHVPRAVFVDLEPTV 303
P+ H + G F + F +DR G V VFV+ P +
Sbjct: 22 PEYHNERSLGDSHFLRTFRMQDRKGYDVLIKVFVNKLPEI 61
>SPCC16A11.08 |atg20||sorting nexin Atg20|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 534
Score = 25.4 bits (53), Expect = 6.6
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 72 LKSKCVSASLYTLAKPESRSVMPAGSFTAWSTASSLMARCP 194
L+S +L+ P SR++ P S + STASSL P
Sbjct: 170 LRSSMPLVMANSLSPPSSRALKPIHSLSNPSTASSLEPSSP 210
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 25.4 bits (53), Expect = 6.6
Identities = 12/37 (32%), Positives = 22/37 (59%)
Frame = -1
Query: 285 DEDSTGYVLATPVSLKKVLKESSPPPMVLSVGIWPSG 175
++D T Y L P+ + L +++PP +V+ +G P G
Sbjct: 834 EKDLTKY-LGPPIYTSQRLYDTTPPGVVMGLGWTPMG 869
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 25.0 bits (52), Expect = 8.8
Identities = 14/30 (46%), Positives = 17/30 (56%)
Frame = +3
Query: 162 STASSLMARCPQTRPSGVETILSTLSSARP 251
ST SSL + ++PS T ST SSA P
Sbjct: 173 STFSSLSSSTSSSQPSVSSTSSSTFSSAAP 202
>SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 400
Score = 25.0 bits (52), Expect = 8.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 136 ITDLDSGLANVYRDALTHFDLSF 68
+T +D GLA YRD TH + +
Sbjct: 146 VTMIDFGLAKKYRDFKTHVHIPY 168
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,632,164
Number of Sequences: 5004
Number of extensions: 55679
Number of successful extensions: 191
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 190
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 271646730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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