Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0862
(618 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_2674| Best HMM Match : Tubulin (HMM E-Value=0) 184 5e-47
SB_19437| Best HMM Match : Tubulin (HMM E-Value=0) 184 7e-47
SB_34400| Best HMM Match : Tubulin (HMM E-Value=0) 183 9e-47
SB_2003| Best HMM Match : Tubulin (HMM E-Value=0) 182 3e-46
SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.) 180 6e-46
SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.) 176 1e-44
SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 2e-44
SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.) 175 2e-44
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.) 157 5e-39
SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.) 144 5e-35
SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0) 141 4e-34
SB_5512| Best HMM Match : Tubulin (HMM E-Value=0) 135 3e-32
SB_48961| Best HMM Match : Tubulin (HMM E-Value=0) 132 2e-31
SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.) 128 4e-30
SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 4e-24
SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 5e-23
SB_17881| Best HMM Match : Tubulin (HMM E-Value=0) 103 1e-22
SB_47198| Best HMM Match : Tubulin (HMM E-Value=0) 103 2e-22
SB_39308| Best HMM Match : Tubulin (HMM E-Value=0) 102 2e-22
SB_17879| Best HMM Match : Tubulin (HMM E-Value=0) 99 1e-21
SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24) 93 2e-19
SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27) 83 1e-16
SB_25311| Best HMM Match : Tubulin (HMM E-Value=0) 55 5e-08
SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06
SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44) 44 1e-04
SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25) 41 7e-04
SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18) 34 0.11
SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32) 33 0.19
SB_45929| Best HMM Match : ANF_receptor (HMM E-Value=4.8e-24) 29 2.3
SB_30809| Best HMM Match : Mab-21 (HMM E-Value=0) 29 2.3
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32) 29 3.0
SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028) 28 5.3
SB_16776| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_14090| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.3
SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0) 28 7.0
SB_42264| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_38521| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
>SB_2674| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 1036
Score = 184 bits (448), Expect = 5e-47
Identities = 87/98 (88%), Positives = 88/98 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 113 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 172
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
TIGKEIVDLVLDRIRKLADQCTGLQ FLIFHSFG TG
Sbjct: 173 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTG 210
Score = 182 bits (444), Expect = 2e-46
Identities = 84/98 (85%), Positives = 88/98 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 634 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 693
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
T+GKE++DLVLDRIRKLADQCTGLQ FLIFHSFG TG
Sbjct: 694 TVGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTG 731
Score = 131 bits (316), Expect = 5e-31
Identities = 57/65 (87%), Positives = 58/65 (89%)
Frame = +2
Query: 77 IKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGV 256
I RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 63 ILQRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGA 122
Query: 257 ASTYP 271
P
Sbjct: 123 GKHVP 127
Score = 130 bits (314), Expect = 9e-31
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
+RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 586 VRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 645
Query: 263 TYP 271
P
Sbjct: 646 HVP 648
Score = 130 bits (313), Expect = 1e-30
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAST 265
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 514 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 573
Query: 266 YP 271
P
Sbjct: 574 VP 575
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTV 303
F F +GKHVPRAVFVDLEPTV
Sbjct: 561 FNTFFSETGAGKHVPRAVFVDLEPTV 586
>SB_19437| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 885
Score = 184 bits (447), Expect = 7e-47
Identities = 86/98 (87%), Positives = 88/98 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 482 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 541
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
T+GKEIVDLVLDRIRKLADQCTGLQ FLIFHSFG TG
Sbjct: 542 TVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTG 579
Score = 183 bits (446), Expect = 9e-47
Identities = 85/98 (86%), Positives = 88/98 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQL+TGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLVTGKEDAANNYARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
T+GKEIVDLVLDRIRKLADQCTGLQ FLIFHSFG TG
Sbjct: 109 TVGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGGGTG 146
Score = 132 bits (318), Expect = 3e-31
Identities = 56/63 (88%), Positives = 58/63 (92%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
Score = 130 bits (313), Expect = 1e-30
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAST 265
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 435 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 494
Query: 266 YP 271
P
Sbjct: 495 VP 496
>SB_34400| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 380
Score = 183 bits (446), Expect = 9e-47
Identities = 85/98 (86%), Positives = 88/98 (89%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 48 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 107
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
T+GKEI+DLVLDRIRKLADQCTGLQ FLIFHSFG TG
Sbjct: 108 TVGKEIIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTG 145
Score = 130 bits (313), Expect = 1e-30
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAST 265
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 1 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 60
Query: 266 YP 271
P
Sbjct: 61 VP 62
>SB_2003| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 451
Score = 182 bits (442), Expect = 3e-46
Identities = 85/98 (86%), Positives = 87/98 (88%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
TIGKEI+DLVLDR RKLADQCTGLQ FLIFHSFG TG
Sbjct: 109 TIGKEIIDLVLDRCRKLADQCTGLQGFLIFHSFGGGTG 146
Score = 130 bits (315), Expect = 7e-31
Identities = 55/63 (87%), Positives = 58/63 (92%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECIS+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 1 MRECISIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>SB_22193| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1231
Score = 180 bits (439), Expect = 6e-46
Identities = 83/98 (84%), Positives = 87/98 (88%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 853 FNTFFSETGAGKHVPRAVFADLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 912
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
T+GKE++DLVLDRIRKLADQCTGLQ FLIFHSFG TG
Sbjct: 913 TVGKEMIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTG 950
Score = 175 bits (426), Expect = 2e-44
Identities = 80/98 (81%), Positives = 86/98 (87%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 420 FNTFFAETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 479
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
T+GKE +D+VLDR+RKLAD CTGLQ FLIFHSFG TG
Sbjct: 480 TVGKEQIDIVLDRLRKLADGCTGLQGFLIFHSFGGGTG 517
Score = 129 bits (311), Expect = 2e-30
Identities = 55/62 (88%), Positives = 57/62 (91%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAST 265
RECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 806 RECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 865
Query: 266 YP 271
P
Sbjct: 866 VP 867
Score = 127 bits (307), Expect = 6e-30
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAST 265
RECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTIGGGDD+FNTFF+ETG
Sbjct: 373 RECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDAFNTFFAETGAGKH 432
Query: 266 YP 271
P
Sbjct: 433 VP 434
>SB_22191| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 865
Score = 176 bits (428), Expect = 1e-44
Identities = 79/98 (80%), Positives = 87/98 (88%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 34 FNTFFSETGAGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 93
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
T+GK+++++VLDR+RKLADQCTGLQ FLIFHSFG TG
Sbjct: 94 TVGKQLIEIVLDRLRKLADQCTGLQGFLIFHSFGGGTG 131
Score = 172 bits (418), Expect = 2e-43
Identities = 77/98 (78%), Positives = 86/98 (87%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEP+V+DE+RTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 467 FNTFFSETGAGKHVPRAVFVDLEPSVIDEIRTGTYRQLFHPEQLITGKEDAANNYARGHY 526
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
T+GK+ +D VLDRIRKLADQC+GLQ FL+FHSFG TG
Sbjct: 527 TVGKDHIDNVLDRIRKLADQCSGLQGFLVFHSFGGGTG 564
Score = 128 bits (309), Expect = 4e-30
Identities = 53/62 (85%), Positives = 57/62 (91%)
Frame = +2
Query: 86 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAST 265
REC+S+HVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 420 RECVSIHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKH 479
Query: 266 YP 271
P
Sbjct: 480 VP 481
Score = 99 bits (238), Expect = 1e-21
Identities = 41/48 (85%), Positives = 43/48 (89%)
Frame = +2
Query: 128 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVASTYP 271
+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG P
Sbjct: 1 MGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGKHVP 48
>SB_22192| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 452
Score = 175 bits (427), Expect = 2e-44
Identities = 81/98 (82%), Positives = 85/98 (86%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F SGKHVPRAVF DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGSGKHVPRAVFCDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 108
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
T+GKE++D VLDR+RKLAD CTGLQ FLIFHSFG TG
Sbjct: 109 TVGKEMIDTVLDRLRKLADGCTGLQGFLIFHSFGGGTG 146
Score = 130 bits (314), Expect = 9e-31
Identities = 56/63 (88%), Positives = 58/63 (92%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECISVHVGQAGVQ+GNACWELYCLEHGIQPDGQMP+DKTIGGGDDSFNTFFSETG
Sbjct: 1 MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGSGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>SB_22190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 417
Score = 175 bits (426), Expect = 2e-44
Identities = 79/98 (80%), Positives = 86/98 (87%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTV+DE+RTGTYRQLFHPEQL++GKEDAANNYARGHY
Sbjct: 14 FNTFFAETGAGKHVPRAVFVDLEPTVIDEIRTGTYRQLFHPEQLLSGKEDAANNYARGHY 73
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
T+GKE +DL LDRIRKLADQCTGLQ FLIFHSFG TG
Sbjct: 74 TVGKEHIDLALDRIRKLADQCTGLQGFLIFHSFGGGTG 111
Score = 51.2 bits (117), Expect = 7e-07
Identities = 21/28 (75%), Positives = 23/28 (82%)
Frame = +2
Query: 188 MPTDKTIGGGDDSFNTFFSETGVASTYP 271
MP+DKTIGGGDDSFNTFF+ETG P
Sbjct: 1 MPSDKTIGGGDDSFNTFFAETGAGKHVP 28
>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1383
Score = 157 bits (382), Expect = 5e-39
Identities = 69/89 (77%), Positives = 82/89 (92%)
Frame = +1
Query: 253 SGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 432
+GK+VPRAV VDLEPTV+DEVRTG YR L+HPEQ+I+GKEDAANNYARGHYTIGKE+V++
Sbjct: 969 AGKYVPRAVLVDLEPTVIDEVRTGMYRYLYHPEQMISGKEDAANNYARGHYTIGKEMVEV 1028
Query: 433 VLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
V+D+IRK+ DQC+GLQ FLIFHSFG TG
Sbjct: 1029 VMDKIRKMTDQCSGLQGFLIFHSFGGGTG 1057
>SB_37573| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 144 bits (349), Expect = 5e-35
Identities = 65/73 (89%), Positives = 69/73 (94%)
Frame = +1
Query: 301 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 480
+ DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQ
Sbjct: 11 LADEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQ 70
Query: 481 RFLIFHSFGEVTG 519
FLIFHSFG TG
Sbjct: 71 GFLIFHSFGGGTG 83
>SB_51156| Best HMM Match : Tubulin_C (HMM E-Value=0)
Length = 377
Score = 141 bits (342), Expect = 4e-34
Identities = 64/70 (91%), Positives = 67/70 (95%)
Frame = +1
Query: 310 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQRFL 489
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKLADQCTGLQ FL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKLADQCTGLQGFL 61
Query: 490 IFHSFGEVTG 519
IFHSFG TG
Sbjct: 62 IFHSFGGGTG 71
>SB_5512| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 365
Score = 135 bits (326), Expect = 3e-32
Identities = 60/70 (85%), Positives = 65/70 (92%)
Frame = +1
Query: 310 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQRFL 489
E+RTGTYRQLFHPEQL++GKEDAANNYARGHYT+GKE +DL LDRIRKLADQCTGLQ FL
Sbjct: 2 EIRTGTYRQLFHPEQLLSGKEDAANNYARGHYTVGKEHIDLALDRIRKLADQCTGLQGFL 61
Query: 490 IFHSFGEVTG 519
IFHSFG TG
Sbjct: 62 IFHSFGGGTG 71
>SB_48961| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 536
Score = 132 bits (320), Expect = 2e-31
Identities = 68/98 (69%), Positives = 72/98 (73%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 405
F F +GKHVPRAVFVDLEPTVV PEQLITGKEDAANNYARGHY
Sbjct: 49 FNTFFSETGAGKHVPRAVFVDLEPTVV----------ALSPEQLITGKEDAANNYARGHY 98
Query: 406 TIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
TIGK+ VD VLDR+RKLADQC+GLQ F IFHSFG TG
Sbjct: 99 TIGKQQVDQVLDRLRKLADQCSGLQGFFIFHSFGGGTG 136
Score = 129 bits (311), Expect = 2e-30
Identities = 55/63 (87%), Positives = 57/63 (90%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECIS+HVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKT GGGDDSFNTFFSETG
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTQGGGDDSFNTFFSETGAGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
>SB_28561| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 94
Score = 128 bits (309), Expect = 4e-30
Identities = 56/63 (88%), Positives = 57/63 (90%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGVAS 262
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMP+DKTI GGDDSFNTFFSETG
Sbjct: 1 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIDGGDDSFNTFFSETGGGK 60
Query: 263 TYP 271
P
Sbjct: 61 HVP 63
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/31 (58%), Positives = 21/31 (67%)
Frame = +1
Query: 226 FQHFLQRDRSGKHVPRAVFVDLEPTVVDEVR 318
F F GKHVPRAVFVDLEP+VV ++
Sbjct: 49 FNTFFSETGGGKHVPRAVFVDLEPSVVGRMK 79
>SB_42897| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 602
Score = 108 bits (259), Expect = 4e-24
Identities = 45/56 (80%), Positives = 51/56 (91%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSET 250
MREC+S+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D++ DDSF+TFFSET
Sbjct: 196 MRECLSIHVGQAGVQIGNACWELYCLEHGIQPDGHMPSDQSADRCDDSFSTFFSET 251
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/23 (78%), Positives = 19/23 (82%)
Frame = +1
Query: 451 KLADQCTGLQRFLIFHSFGEVTG 519
K ADQCTGLQ FL+FHSFG TG
Sbjct: 255 KHADQCTGLQGFLVFHSFGGGTG 277
>SB_35594| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 50
Score = 104 bits (250), Expect = 5e-23
Identities = 46/49 (93%), Positives = 49/49 (100%)
Frame = +1
Query: 310 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 456
EVRTGTYRQLFHPEQLITGKEDAANNYARGHYT+GKE++DLVLDRIRKL
Sbjct: 2 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTVGKELIDLVLDRIRKL 50
>SB_17881| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 458
Score = 103 bits (247), Expect = 1e-22
Identities = 47/88 (53%), Positives = 61/88 (69%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 270 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 329
Query: 436 LDRIRKLADQCTGLQRFLIFHSFGEVTG 519
LD +RK A+ C LQ F + HS G TG
Sbjct: 330 LDVVRKEAESCDCLQGFQLTHSLGGGTG 357
Score = 41.5 bits (93), Expect = 5e-04
Identities = 20/47 (42%), Positives = 23/47 (48%)
Frame = +2
Query: 68 KTQIKMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 208
K KMRE + GQ G QIG WE+ EHGI P G D +
Sbjct: 209 KLLFKMREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL 255
>SB_47198| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 103 bits (246), Expect = 2e-22
Identities = 46/88 (52%), Positives = 61/88 (69%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
GK+VPRA+ VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 57 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 116
Query: 436 LDRIRKLADQCTGLQRFLIFHSFGEVTG 519
LD +RK A+ C LQ F + HS G TG
Sbjct: 117 LDVVRKEAESCDCLQGFQLTHSLGGGTG 144
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 208
MRE + GQ G QIG WE+ EHGI P G D +
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL 42
>SB_39308| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 391
Score = 102 bits (245), Expect = 2e-22
Identities = 46/88 (52%), Positives = 61/88 (69%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
GK+VPRAV VDLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 2 GKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSV 61
Query: 436 LDRIRKLADQCTGLQRFLIFHSFGEVTG 519
LD +RK A+ C +Q F + HS G TG
Sbjct: 62 LDVVRKEAESCDCIQGFQLTHSLGGGTG 89
>SB_17879| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 446
Score = 99 bits (238), Expect = 1e-21
Identities = 43/88 (48%), Positives = 61/88 (69%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
GK+VPR+V +DLEP +D VR+G + Q+F P+ + G+ A NN+A+GHYT G E++D V
Sbjct: 57 GKYVPRSVLIDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELMDSV 116
Query: 436 LDRIRKLADQCTGLQRFLIFHSFGEVTG 519
LD +RK A+ C +Q F + HS G TG
Sbjct: 117 LDVVRKEAESCDCIQGFQLTHSLGGGTG 144
Score = 41.5 bits (93), Expect = 5e-04
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 208
MRE +S+ GQ G QIG WE+ EHGI P G D +
Sbjct: 1 MREIVSLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL 42
>SB_47795| Best HMM Match : Tubulin_C (HMM E-Value=0.24)
Length = 149
Score = 92.7 bits (220), Expect = 2e-19
Identities = 40/49 (81%), Positives = 45/49 (91%)
Frame = +1
Query: 310 EVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKL 456
EVR GTYR LFHP+QLITGKEDAANNYARGHYT+GKE +DL L++IRKL
Sbjct: 2 EVRMGTYRDLFHPDQLITGKEDAANNYARGHYTVGKEHIDLTLEKIRKL 50
>SB_48074| Best HMM Match : Tubulin (HMM E-Value=4.4e-27)
Length = 144
Score = 83.4 bits (197), Expect = 1e-16
Identities = 35/88 (39%), Positives = 55/88 (62%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 435
G++VPR++ VDLEP +D VR G +F P+ + + AANN+A+GHY+ G E++D +
Sbjct: 13 GRYVPRSILVDLEPGTMDAVRGGPLGNMFRPDNFVNSQSGAANNWAKGHYSEGAELIDNI 72
Query: 436 LDRIRKLADQCTGLQRFLIFHSFGEVTG 519
D +RK A+ C +Q + + G TG
Sbjct: 73 FDVLRKEAENCDCMQGVQLIQALGGGTG 100
>SB_25311| Best HMM Match : Tubulin (HMM E-Value=0)
Length = 629
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/51 (50%), Positives = 34/51 (66%)
Frame = +1
Query: 367 KEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
+ AANN+A+G YT G E++D +D IRKLA+ C +Q F I HS G TG
Sbjct: 2 QNSAANNWAKGFYTEGAELMDSGMDCIRKLAENCDTVQGFQIAHSLGGGTG 52
>SB_18752| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 47.6 bits (108), Expect = 8e-06
Identities = 18/35 (51%), Positives = 26/35 (74%)
Frame = +1
Query: 256 GKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLI 360
GK+VPRA+ VDLEP +D VR+G + Q+F P+ +
Sbjct: 57 GKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFV 91
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/42 (42%), Positives = 21/42 (50%)
Frame = +2
Query: 83 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTI 208
MRE + GQ G QIG WE+ EHGI P G D +
Sbjct: 1 MREIVHCQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDL 42
>SB_47142| Best HMM Match : Tubulin (HMM E-Value=5.32493e-44)
Length = 474
Score = 44.0 bits (99), Expect = 1e-04
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Frame = +1
Query: 235 FLQRDRSGKHVPRAVFVDLEPTVVDEV-----RTGTYRQLFHPEQLITGKEDAANNYARG 399
F R+ RAV +D+E V+ + ++GT+R + Q + K + NN+A G
Sbjct: 55 FFTRENDDILNARAVSIDMESKVISQTLSEASKSGTWR--YPKGQQFSQKRGSGNNWAHG 112
Query: 400 HYTIGKEIVDLVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
G + +D VLD +++ ++C L FL S TG
Sbjct: 113 FSEHGPKSIDKVLDLVQREVEKCDRLDGFLTLLSLAGGTG 152
>SB_59740| Best HMM Match : Tubulin (HMM E-Value=2.1e-25)
Length = 139
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = +1
Query: 457 ADQCTGLQRFLIFHSFGEVTG 519
ADQCTGLQ FLIFHSFG TG
Sbjct: 1 ADQCTGLQGFLIFHSFGGGTG 21
>SB_37976| Best HMM Match : Tubulin (HMM E-Value=4.5e-18)
Length = 553
Score = 33.9 bits (74), Expect = 0.11
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +1
Query: 271 RAVFVDLEPTVVDEVRT--GTYRQLFHPEQLITGKEDAANNYARGHY--TI---GKEIVD 429
R V VD E V+ R G + Q +I G+ NN+A G++ +I G ++
Sbjct: 40 RCVCVDSESKVIASNRRSDGVHGQN-RDSNIIAGRRGRGNNFALGYHGNSIDEGGTSLLH 98
Query: 430 LVLDRIRKLADQCTGLQRFLIFHSFGEVTG 519
+ +D +RK ++C ++ HS TG
Sbjct: 99 MTMDAMRKEVERCDSFAGTIVMHSLTGGTG 128
>SB_40336| Best HMM Match : Tubulin_C (HMM E-Value=1.3e-32)
Length = 488
Score = 33.1 bits (72), Expect = 0.19
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +1
Query: 271 RAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNY 390
RAV +D+E VV+ + G +F +QLIT NN+
Sbjct: 76 RAVLIDMEEGVVNNILKGPLHDVFDCQQLITDVSGCGNNW 115
>SB_45929| Best HMM Match : ANF_receptor (HMM E-Value=4.8e-24)
Length = 1001
Score = 29.5 bits (63), Expect = 2.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = -2
Query: 599 GELPSFKLLARSQRRDAPINKESEPQKPVTSPKEW 495
G+ PS K + ++D KE EP++ SP EW
Sbjct: 955 GKKPSVKKKGKVPKKDKTQEKEVEPRENPKSPDEW 989
>SB_30809| Best HMM Match : Mab-21 (HMM E-Value=0)
Length = 1710
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = -3
Query: 583 LNFLPVVNGETLPSIRKVNPRSPLPHRRSGRSGIFADRY 467
LN + + P ++++NP +P P R + S I+ D Y
Sbjct: 274 LNLIKSNDHSAAPLVQRLNPLTPNPTRATNLSSIYIDNY 312
>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
Length = 1027
Score = 29.1 bits (62), Expect = 3.0
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +1
Query: 268 PRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGK 417
P V+ L T VD+V+TG PEQL+ K++A+ RG + + K
Sbjct: 126 PETVYQLLTNTYVDDVQTGG----DDPEQLLRFKQEASEIMERGGFQLHK 171
>SB_2586| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 38
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/35 (42%), Positives = 17/35 (48%)
Frame = +2
Query: 143 WELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSE 247
WE+ EHGI PDGQ T D N +F E
Sbjct: 2 WEVIAEEHGIDPDGQC-TAVQSKIQTDRLNVYFDE 35
>SB_2033| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 995
Score = 29.1 bits (62), Expect = 3.0
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +1
Query: 283 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 462
V +E TV DE G YR E ITGK + + YTI K ++ + ++ D
Sbjct: 39 VRVECTVTDERYQGWYRMDGETENKITGKNFLTDKF----YTIDKGDKHTLVIKSIEVKD 94
Query: 463 ----QCTGLQRFLIFHSFGE 510
+C G + +FH F E
Sbjct: 95 GGYYKCKGAKTSKLFHLFVE 114
>SB_45701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/37 (43%), Positives = 23/37 (62%)
Frame = -2
Query: 218 LHPRWSCLWASGHQAGCRAPGSKAPSRHYRSGLRLGQ 108
LH ++S L+ G +G ++PG AP RH R+ RL Q
Sbjct: 32 LHFQYSGLYG-GVDSGKQSPGVMAPPRHSRNRNRLSQ 67
>SB_34277| Best HMM Match : DUF321 (HMM E-Value=0.028)
Length = 302
Score = 28.3 bits (60), Expect = 5.3
Identities = 12/37 (32%), Positives = 16/37 (43%)
Frame = +3
Query: 312 GPHWHIQTVVSSRTTYYW*GRCGQQLCPWSLHHWKGN 422
G HW+ T + +W G G + W HW GN
Sbjct: 48 GKHWYGNTGTKTLIWKHWYGNTGTKTLIWK--HWYGN 82
>SB_16776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
Frame = -3
Query: 568 VVNGET----LPSIRKVNPRSPLPHRRSGRSGIFADRYTGQRACGFCPKPNLRFPFQWCS 401
VV GET + ++KV+P++P P + + G G+ C FC K + Q C
Sbjct: 170 VVRGETRSQNVDFVKKVHPKTPKPKKSQPKGGPQGSA-QGKSKCMFCGKQ--KHDHQLCP 226
Query: 400 DHGHSC 383
+C
Sbjct: 227 AKNDTC 232
>SB_14090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 343
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -2
Query: 560 RRDAPINKESEPQKPVTSPKEWKIRNLC 477
R PI + S QKP+TSP EW + C
Sbjct: 86 RGTTPI-RYSHGQKPITSPSEWTVPYHC 112
>SB_52656| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1321
Score = 27.9 bits (59), Expect = 7.0
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 545 INKESEPQKPVTSPKEW 495
I++E EP KP+T+P +W
Sbjct: 734 IDQEVEPSKPLTAPDDW 750
>SB_42264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 334
Score = 27.9 bits (59), Expect = 7.0
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Frame = -3
Query: 595 NSQVLNFLPVV-NGETLPS-IRKVNPRSPLPHRRSGRS 488
++ ++FLP+ NG T S RKV P P+P ++ S
Sbjct: 189 DNNAISFLPIDDNGGTAESQFRKVKPEKPIPRKQPATS 226
>SB_38521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 506
Score = 27.9 bits (59), Expect = 7.0
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = -1
Query: 351 FWMKQLSVCASADLINNSRFK-IDEDSTGYVLATPVSLKK 235
FW + C NN R K D+D Y LAT VS +K
Sbjct: 24 FWFDDDNECVEEKSRNNKRIKDDDDDEVLYDLATHVSRRK 63
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,606,220
Number of Sequences: 59808
Number of extensions: 460144
Number of successful extensions: 1224
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1222
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1524174750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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