Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0861
         (745 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    25   0.75 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         23   4.0  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    23   4.0  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    23   4.0  
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   7.0  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 25.0 bits (52), Expect = 0.75
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 682 PSGGKWGSPISIPRMVQSKV 741
           PS G W   +S+P+M+  K+
Sbjct: 236 PSSGHWQDQMSLPQMLADKI 255


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 225 DINFRNSNTVANRMYINSR 169
           D+NFR  N   N + +N+R
Sbjct: 397 DVNFRIMNANVNELILNTR 415


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 225 DINFRNSNTVANRMYINSR 169
           D+NFR  N   N + +N+R
Sbjct: 397 DVNFRIMNANVNELILNTR 415


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -2

Query: 225 DINFRNSNTVANRMYINSR 169
           D+NFR  N   N + +N+R
Sbjct: 397 DVNFRIMNANVNELILNTR 415


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 353 KNHYFTLILWITKNRVIQHILIKN*TVYI 439
           +N    +I W+ KN     ILI N T+ I
Sbjct: 68  QNDILKVIEWVEKNLGAIDILINNATINI 96


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 207,066
Number of Sequences: 438
Number of extensions: 4406
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23266665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)