Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0859
         (596 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q926J7 Cluster: Pli0064 protein; n=4; Listeria|Rep: Pli...    44   0.003
UniRef50_P10023 Cluster: Uncharacterized 30.3 kDa protein; n=2; ...    42   0.008
UniRef50_Q03PB7 Cluster: Putative uncharacterized protein; n=1; ...    36   0.96 
UniRef50_A6LEN6 Cluster: Putative uncharacterized protein; n=1; ...    34   2.2  
UniRef50_Q48503 Cluster: Beta-lactamase precursor; n=4; Lactococ...    33   3.9  
UniRef50_A3HY14 Cluster: Putative uncharacterized protein; n=1; ...    33   3.9  
UniRef50_Q5I0G3 Cluster: Malate dehydrogenase 1B; n=21; Amniota|...    33   6.7  
UniRef50_Q53TK9 Cluster: Malate dehydrogenase; n=3; Eutheria|Rep...    33   6.7  
UniRef50_Q0CED3 Cluster: Predicted protein; n=1; Aspergillus ter...    33   6.7  
UniRef50_Q74EW7 Cluster: Sensor protein; n=1; Geobacter sulfurre...    32   8.9  

>UniRef50_Q926J7 Cluster: Pli0064 protein; n=4; Listeria|Rep:
           Pli0064 protein - Listeria innocua
          Length = 301

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 26/66 (39%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
 Frame = +3

Query: 276 NKREFINTVKKGDVLITGRGVGGLIGHAAIMTSDYWVLEMPGGDG---W-ELGIPDNNXQ 443
           N  +    +KKGD+LI         GHAAI TS+ ++LEM GG     W   GI +NN Q
Sbjct: 120 NGNKLEKAIKKGDILIVK---SSSFGHAAIATSNKYILEMSGGGNPSKWATTGIKNNNHQ 176

Query: 444 VPXXQW 461
           +   +W
Sbjct: 177 LNKHKW 182


>UniRef50_P10023 Cluster: Uncharacterized 30.3 kDa protein; n=2;
           Bacillus cereus group|Rep: Uncharacterized 30.3 kDa
           protein - Bacillus thuringiensis
          Length = 270

 Score = 42.3 bits (95), Expect = 0.008
 Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
 Frame = +3

Query: 297 TVKKGDVLITGR-GVGGLIGHAAIMTSDYWVLEMPGGDGWELGIPDNNXQVPXXQWFDMH 473
           T+K GD+ IT      G++GHAAI   D ++L MPG           N Q+    W   +
Sbjct: 114 TLKAGDIFITNATSSAGIVGHAAIANGDNYILHMPGAG-------QGNQQLSTSNWMQKY 166

Query: 474 --ASXWTTVYR 500
             +  W  VYR
Sbjct: 167 TASGKWIKVYR 177


>UniRef50_Q03PB7 Cluster: Putative uncharacterized protein; n=1;
           Lactobacillus brevis ATCC 367|Rep: Putative
           uncharacterized protein - Lactobacillus brevis (strain
           ATCC 367 / JCM 1170)
          Length = 297

 Score = 35.5 bits (78), Expect = 0.96
 Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
 Frame = +3

Query: 300 VKKGDVLI--TGRGVGGLIGHAAIMTSDYWVLEMPGGDGWELGIPDNNXQVPXXQWFDMH 473
           +K GD+LI      +  + GHAAI+ S  +++EMPG     +G   N   V    +F  H
Sbjct: 134 MKAGDILICHNTNSMKSIPGHAAIVNSSGYIMEMPGTK--HVGKKKNARIVTKKHFFKQH 191

Query: 474 A--SXWTTVYR 500
           +  S +  VYR
Sbjct: 192 SGGSAYVMVYR 202


>UniRef50_A6LEN6 Cluster: Putative uncharacterized protein; n=1;
           Parabacteroides distasonis ATCC 8503|Rep: Putative
           uncharacterized protein - Parabacteroides distasonis
           (strain ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 280

 Score = 34.3 bits (75), Expect = 2.2
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
 Frame = +3

Query: 390 EMPGGDGWELGIPDNNXQVPXXQWFDMHASXWT--TVY-RCTELXRQSWLRVGPTVHTT 557
           +  GG+GW LG      Q+   ++ D H   +T  T Y R T+  +  W   G T++T+
Sbjct: 131 DFSGGEGWSLGSASKEIQIQLKEYIDTHTEPYTLYTFYGRVTD--QDGWPVPGVTIYTS 187


>UniRef50_Q48503 Cluster: Beta-lactamase precursor; n=4; Lactococcus
           lactis|Rep: Beta-lactamase precursor - Lactococcus
           lactis
          Length = 47

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +2

Query: 131 RDIXKEYRSLNGSEXIXYHDWLVMNNFGILSDXQESLFQ 247
           R   +EY++ + S  I Y  WL +NN+G++ D +E + Q
Sbjct: 2   RPSYEEYKNYDSS--ITYESWLKLNNYGVMVDTKEPVLQ 38


>UniRef50_A3HY14 Cluster: Putative uncharacterized protein; n=1;
           Algoriphagus sp. PR1|Rep: Putative uncharacterized
           protein - Algoriphagus sp. PR1
          Length = 106

 Score = 33.5 bits (73), Expect = 3.9
 Identities = 19/50 (38%), Positives = 29/50 (58%)
 Frame = +3

Query: 255 QQAHTVDNKREFINTVKKGDVLITGRGVGGLIGHAAIMTSDYWVLEMPGG 404
           QQ    ++K+ FI  +KKGD ++T   +GGL G  A +  D  +LE+  G
Sbjct: 39  QQKKQKESKK-FIEEIKKGDAVVT---IGGLHGKVASVDGDTVILELDRG 84


>UniRef50_Q5I0G3 Cluster: Malate dehydrogenase 1B; n=21;
           Amniota|Rep: Malate dehydrogenase 1B - Homo sapiens
           (Human)
          Length = 518

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +3

Query: 279 KREFINTVKKGDVLITGRGVGGLIG-HAAIMTSDYWVLEMPGGDGWELGI 425
           KREF+  +K  ++  TGR  GG++  H+   T  YW    P G+   LGI
Sbjct: 355 KREFVAILK--NLTTTGRQFGGILAAHSIATTLKYWYHGSPPGEIVSLGI 402


>UniRef50_Q53TK9 Cluster: Malate dehydrogenase; n=3; Eutheria|Rep:
           Malate dehydrogenase - Homo sapiens (Human)
          Length = 283

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +3

Query: 279 KREFINTVKKGDVLITGRGVGGLIG-HAAIMTSDYWVLEMPGGDGWELGI 425
           KREF+  +K  ++  TGR  GG++  H+   T  YW    P G+   LGI
Sbjct: 142 KREFVAILK--NLTTTGRQFGGILAAHSIATTLKYWYHGSPPGEIVSLGI 189


>UniRef50_Q0CED3 Cluster: Predicted protein; n=1; Aspergillus
           terreus NIH2624|Rep: Predicted protein - Aspergillus
           terreus (strain NIH 2624)
          Length = 424

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -2

Query: 358 ACPINPPTPLPVIKTSPFLTVLMN 287
           + P +PPTP+P+  T P LTV++N
Sbjct: 119 SAPTSPPTPVPIPNTPPPLTVIVN 142


>UniRef50_Q74EW7 Cluster: Sensor protein; n=1; Geobacter
           sulfurreducens|Rep: Sensor protein - Geobacter
           sulfurreducens
          Length = 787

 Score = 32.3 bits (70), Expect = 8.9
 Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
 Frame = +2

Query: 11  GXLRYIQQCFRSLSHRRQMGIINS--EKYSXESFGKDXRDXFRDIXKEYRSLNGSEXIXY 184
           G +RY+ Q F  +S     GIIN     Y    FG        D+  + R+  G   I  
Sbjct: 304 GLIRYVNQAFERISGTDHAGIINKRIHNYGKSLFGSPFIQALTDVVAQARTRTGRYVIVR 363

Query: 185 HDWLVMNNFGILSDXQES 238
            D   ++   ILS  +E+
Sbjct: 364 DDGSNVDVEVILSPVRET 381


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 508,272,488
Number of Sequences: 1657284
Number of extensions: 8679513
Number of successful extensions: 23499
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23492
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41902926763
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)