Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0857
         (732 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z77669-2|CAB01244.2|  120|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AF038606-1|AAB92025.1|   59|Caenorhabditis elegans Hypothetical ...    29   2.6  
Z79605-3|CAB01905.1|  163|Caenorhabditis elegans Hypothetical pr...    29   4.5  
AL023847-6|CAA19552.1|  297|Caenorhabditis elegans Hypothetical ...    28   5.9  
Z99102-2|CAB11775.1|  499|Caenorhabditis elegans Hypothetical pr...    28   7.8  
AL021497-20|CAA16410.3| 1057|Caenorhabditis elegans Hypothetical...    28   7.8  

>Z77669-2|CAB01244.2|  120|Caenorhabditis elegans Hypothetical
           protein T07F10.5 protein.
          Length = 120

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 13/40 (32%), Positives = 20/40 (50%)
 Frame = -2

Query: 440 PIPKTHLKAR*KDMSQGHRKNMEVSSLQSFLVRNRYYLWE 321
           PI   +L+ R  D  Q HR N     + SF + N++  W+
Sbjct: 73  PIDAHYLRYRPSDADQNHRINNSTKFICSFFMFNKHNFWQ 112


>AF038606-1|AAB92025.1|   59|Caenorhabditis elegans Hypothetical
           protein C04C3.4 protein.
          Length = 59

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 440 PIPKTHLKAR*KDMSQGHRKNMEVSSLQSFLVRNRYYLWE 321
           PI    L+ R  D +Q HR N     + SF + N+  LW+
Sbjct: 12  PIDAHFLRYRPSDAAQNHRINNSTKFIFSFFMFNKQNLWQ 51


>Z79605-3|CAB01905.1|  163|Caenorhabditis elegans Hypothetical
           protein ZK678.3 protein.
          Length = 163

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -2

Query: 440 PIPKTHLKAR*KDMSQGHRKNMEVSSLQSFLVRNRYYLWE 321
           PI    L+ R  D +Q HR N     + SF + N+   W+
Sbjct: 116 PIDAHFLRCRPSDAAQSHRINNSTKFIFSFFMFNKQNFWQ 155


>AL023847-6|CAA19552.1|  297|Caenorhabditis elegans Hypothetical
           protein Y57A10C.10 protein.
          Length = 297

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 139 RRQLFSNDYSEISVNIVNMGWKMAGNKTIKCGIFLIALLTVRL 11
           +R L++ DYS +   IV+  ++ A + T  CGI L +L  + +
Sbjct: 163 KRSLYTVDYSTVIFQIVSKKFRQANHTT--CGILLSSLFCLTI 203


>Z99102-2|CAB11775.1|  499|Caenorhabditis elegans Hypothetical
           protein B0331.1 protein.
          Length = 499

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -2

Query: 389 HRKNMEVSSLQSFLVRNRYYLWESNGRTQLL*VAIMTQTSRNVTYQ*LIDLWG 231
           H    + ++L    V NR Y+W  NG+T    +   T+ ++   Y  L+   G
Sbjct: 68  HEARSKGANLMRTQVMNRIYVWPLNGKTAATILESSTEVNKGDDYAFLVPWLG 120


>AL021497-20|CAA16410.3| 1057|Caenorhabditis elegans Hypothetical
           protein Y51A2D.7b protein.
          Length = 1057

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 569 YYYWAMYVKVHIGNFINPYLTASYRXXMEL 658
           Y +W +Y   HIG+ +N  LT + +   EL
Sbjct: 593 YGFWKLYPGQHIGSVLNTILTNTVKICWEL 622


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,736,297
Number of Sequences: 27780
Number of extensions: 337529
Number of successful extensions: 904
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)