Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0857
         (732 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          23   3.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.9  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      23   3.9  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    22   5.2  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    22   5.2  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    22   5.2  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   9.0  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 327 KIISVTY*ETL*RTYLHVFSVSL*HVLLTSFEMSLRYRRGL 449
           ++++  Y E L      V  VSL H + T +  ++R+R GL
Sbjct: 264 QVLNRYYLERLSNDMGEVSYVSLDHPIPTGYYPTMRFRNGL 304


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 473  GYYAPNTAKPPPIP 432
            GY AP   K PP+P
Sbjct: 1644 GYIAPPNRKLPPVP 1657


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +3

Query: 327 KIISVTY*ETL*RTYLHVFSVSL*HVLLTSFEMSLRYRRGL 449
           ++++  Y E L      V  VSL H + T +  ++R+R GL
Sbjct: 264 QVLNRYYLERLSNDMGEVSYVSLDHPIPTGYYPTMRFRNGL 304


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 489 LVVCGWILCSEHSQAPAYTEDSSQ 418
           L +  W +   HS   A+ EDS +
Sbjct: 7   LFIAAWFIACTHSFPGAHDEDSKE 30


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 489 LVVCGWILCSEHSQAPAYTEDSSQ 418
           L +  W +   HS   A+ EDS +
Sbjct: 7   LFIAAWFIACTHSFPGAHDEDSKE 30


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/24 (33%), Positives = 12/24 (50%)
 Frame = -1

Query: 489 LVVCGWILCSEHSQAPAYTEDSSQ 418
           L +  W +   HS   A+ EDS +
Sbjct: 7   LFIAAWFIACTHSFPGAHDEDSKE 30


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +3

Query: 153 FAHYQHKRLFLR 188
           F+HY+H+ +F++
Sbjct: 278 FSHYEHQNVFVK 289


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,499
Number of Sequences: 438
Number of extensions: 4440
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22779405
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)