Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0856
(688 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC162.08c |nup211||nuclear pore complex associated protein|Sch... 36 0.007
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 31 0.16
SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual 31 0.21
SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyc... 30 0.27
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.48
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 29 0.63
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 28 1.1
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 28 1.5
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 27 2.5
SPAC19A8.07c |||U3 snoRNP-associated protein Imp4 |Schizosacchar... 27 2.5
SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces po... 27 3.4
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 4.4
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 26 4.4
SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat protei... 26 4.4
SPCC569.08c |ade5|ade8|phosphoribosylglycinamide formyltransfera... 26 5.9
SPAC7D4.09c |||steroid dehydrogenase |Schizosaccharomyces pombe|... 26 5.9
SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr 1... 25 7.8
SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr 1... 25 7.8
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 25 7.8
SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces p... 25 7.8
>SPCC162.08c |nup211||nuclear pore complex associated
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1837
Score = 35.5 bits (78), Expect = 0.007
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Frame = +1
Query: 277 IRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV 456
+ SE+T + T E +E+ RE I LRS L D + VE + E + E+
Sbjct: 974 LASEKTLEMMNETHEQFKHLVESEISTREEKITSLRSELLDLNKRVEVLKEEKESSSKEL 1033
Query: 457 YKAIED----KMTTAADKRDETSRR*SS--VCAKHEEQVRKVPRRLTRRSSSSFESAIQE 618
K +ED K + + K+D R + V +E + K R L + S++ES I
Sbjct: 1034 AKQLEDAVREKDSALSFKKDYEKIRSDADRVITSLKEDIEK-ERSLMKECHSNYESEI-- 1090
Query: 619 KLQQGRRT 642
+ GR T
Sbjct: 1091 -VSHGRTT 1097
Score = 25.8 bits (54), Expect = 5.9
Identities = 27/124 (21%), Positives = 59/124 (47%), Gaps = 10/124 (8%)
Frame = +1
Query: 304 IVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEK--TRLTLEQQTAEVYKAIEDK 477
I+A + L A+ E +E+ E +NE R+K+ E +K + T + + + +E+K
Sbjct: 1592 ILAARSELVAEKEKTKEELENQLNEKSQRIKELEEQAQKNSSENTHDNIDDMIKQQVEEK 1651
Query: 478 MTTAADKRD--------ETSRR*SSVCAKHEEQVRKVPRRLTRRSSSSFESAIQEKLQQG 633
+ + D ET R + + +E++ R + ++T + + E+ + ++L
Sbjct: 1652 LKENSANFDVKLKKVVAETEFRSKAKISVYEKKTRDLQNKIT-QLEETIEN-LNKQLSNP 1709
Query: 634 RRTD 645
+TD
Sbjct: 1710 EKTD 1713
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 31.1 bits (67), Expect = 0.16
Identities = 21/118 (17%), Positives = 53/118 (44%)
Frame = +1
Query: 292 TNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIE 471
T N I++ + + + HEE + ELR++++++++ E+ ++ E+Y+
Sbjct: 85 TLNNILSMRTETGSMAKAHEEVSQQINTELRNKIREYIDQTEQQKVVAANAIEELYQKKT 144
Query: 472 DKMTTAADKRDETSRR*SSVCAKHEEQVRKVPRRLTRRSSSSFESAIQEKLQQGRRTD 645
++K+D C K +R+ +++T R + I++ ++ D
Sbjct: 145 ALEIDLSEKKDAYEYS----CNKLNSYMRQT-KKMTGRELDKYNLKIRQAALAVKKMD 197
>SPBC16G5.05c |||MSP domain|Schizosaccharomyces pombe|chr 2|||Manual
Length = 383
Score = 30.7 bits (66), Expect = 0.21
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 147 PEKTPSVEEIQEKLKAAEERRRSLEASKMAAIAQKMPRSRRRPHP 281
PE TP+VE++ E L E R SL+ +K AA A + + P
Sbjct: 301 PESTPAVEKVSENL--GSETRESLQGAKPAAGAHSSDNALEQIKP 343
>SPAC29E6.10c ||SPAC30.14c|kinetochore protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1085
Score = 30.3 bits (65), Expect = 0.27
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 1/104 (0%)
Frame = +1
Query: 310 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK-AIEDKMTT 486
A K+ + +++ +EK++ + + K + EK +L +QQ A+ K A E ++
Sbjct: 637 ARKKREEQRLKREQEKKQQELERQKREEKQKQKEREK-KLKKQQQEADREKMAREQRLRE 695
Query: 487 AADKRDETSRR*SSVCAKHEEQVRKVPRRLTRRSSSSFESAIQE 618
+KR R+ K EE+ R+ R L + S E ++E
Sbjct: 696 EEEKRILEERKRREKLDKEEEERRR--RELLEKESEEKERRLRE 737
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.48
Identities = 19/69 (27%), Positives = 30/69 (43%)
Frame = +3
Query: 24 AMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAEE 203
A+ ETKST ++ GG A +A P +P P +P P+ E +++
Sbjct: 867 AITPETKST---VNQIMSGGEALAAPVAVPAPIPAPVAEPAPPAAPAKEVVEKAPSPPAT 923
Query: 204 RRRSLEASK 230
R +S K
Sbjct: 924 RPKSTTPQK 932
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 29.1 bits (62), Expect = 0.63
Identities = 22/69 (31%), Positives = 34/69 (49%)
Frame = +1
Query: 343 THEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDETSRR* 522
T E +RE + + + +++ E + +TR+ LE+Q V IED A K E
Sbjct: 456 TSESERE--LEKKKEQVEKKQEELMQTRIVLEEQVFLVENMIED--AKAKRKFSEVETLL 511
Query: 523 SSVCAKHEE 549
SS+ HEE
Sbjct: 512 SSLAPLHEE 520
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 28.3 bits (60), Expect = 1.1
Identities = 18/92 (19%), Positives = 46/92 (50%), Gaps = 2/92 (2%)
Frame = +1
Query: 319 EALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIE--DKMTTAA 492
E L K+++ ++++ INEL R+K + V + T+++ ++ E +++ A
Sbjct: 530 EGLTLKIDSITKEKDRLINELEQRIKSYEVNVSELNGTIDEYRNKLKDKEETYNEVMNAF 589
Query: 493 DKRDETSRR*SSVCAKHEEQVRKVPRRLTRRS 588
+D RR K +++ +++ L +++
Sbjct: 590 QYKDNDLRRFHESINKLQDREKELTSNLEKKN 621
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.9 bits (59), Expect = 1.5
Identities = 20/83 (24%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Frame = +3
Query: 30 EVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPR-RADSPEKTPSVEEIQEKLKAAEER 206
++E S +R +E+++ +V+ P P + D+ + + EI+ K K +ER
Sbjct: 101 QLELYSLNVRLEEITQKLRTGDVVPHHRERSPSPPPQYDNHGRRLNTREIRYKKKLEDER 160
Query: 207 RRSLEASKMAAIAQKMPRSRRRP 275
R +E + + P RRP
Sbjct: 161 HRIIERAMKMVPGFRAPSDYRRP 183
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 27.1 bits (57), Expect = 2.5
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = +3
Query: 141 DSPEKTPSVEE-IQEKLKAAEERRRSLEASKMAAIAQKMPRSRRR 272
DS EK + + +QEKL+A +E +L + + ++ +S+RR
Sbjct: 107 DSLEKKENERDRLQEKLRALQEESANLRRQRENRLREEQEQSKRR 151
>SPAC19A8.07c |||U3 snoRNP-associated protein Imp4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 289
Score = 27.1 bits (57), Expect = 2.5
Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +1
Query: 310 ATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQ--QTAEVYKAIEDKMT 483
A +E + ++E +EA +NE R L+ LEG ++ L++ Q + YK E + T
Sbjct: 5 AVRERRQFIYKRNQELQEAKLNEKRRALRKALEGNKELNKDLQEDSQLQKDYKYDESRAT 64
>SPAC890.05 |||ribosome biogenesis protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 284
Score = 26.6 bits (56), Expect = 3.4
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +3
Query: 141 DSPEKTPSVEEIQEKLKAAE---ERRRSLEASKMAAIA 245
D PE T SVE+++E + A RR A K AA++
Sbjct: 234 DKPESTSSVEKVKEGNRPASIHFHTRRKFLAQKRAAVS 271
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.2 bits (55), Expect = 4.4
Identities = 15/52 (28%), Positives = 29/52 (55%)
Frame = +3
Query: 126 VPRRADSPEKTPSVEEIQEKLKAAEERRRSLEASKMAAIAQKMPRSRRRPHP 281
V ++SP + ++E+ ++KA +RR + ++AA+ K PR + P P
Sbjct: 1213 VKATSESPSASSNLEDRAARIKAEAQRRMN---ERLAALGIK-PRQKGTPSP 1260
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 26.2 bits (55), Expect = 4.4
Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +1
Query: 286 EQTNNFIVATKEA-LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAE 453
+Q VA ++A +E K E + + + SR+K + +E TRL + Q E
Sbjct: 460 KQVEELTVALNSGKMNAIVEAESSKNELWDSMMVSRMKTQEQSIELTRLYKQLQDIE 516
>SPAC23H4.01c ||SPAP27G11.01|sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 945
Score = 26.2 bits (55), Expect = 4.4
Identities = 23/91 (25%), Positives = 41/91 (45%)
Frame = +1
Query: 205 GDVAWKLVRWPPLLRRCQDRGGVRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELR 384
G+V ++ PL+ + +D G+ + + Q N K+ L +T + Y
Sbjct: 811 GNVIERIWEVGPLVDKPEDHCGMTVFAAQMNEITDLEKDKLPPT-DTRLRPDQRY----- 864
Query: 385 SRLKDHLEGVEKTRLTLEQQTAEVYKAIEDK 477
R + L+ E +L LEQ+ E K +E+K
Sbjct: 865 -RENNDLDHAEPLKLELEQKQRERRKEMEEK 894
>SPCC569.08c |ade5|ade8|phosphoribosylglycinamide
formyltransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 207
Score = 25.8 bits (54), Expect = 5.9
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 78 GGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAE 200
G + + VI A G P+ + T S+E ++EK+ AAE
Sbjct: 151 GAMVHWVIAAVDEGKPIIVQEVPILSTDSIEALEEKIHAAE 191
>SPAC7D4.09c |||steroid dehydrogenase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 274
Score = 25.8 bits (54), Expect = 5.9
Identities = 12/41 (29%), Positives = 19/41 (46%)
Frame = -3
Query: 353 SSWVSILASRASLVATMKLFVCSLRMRTPPRSWHLLSNGGH 231
++W S+L + + T S+ P SW L+ GGH
Sbjct: 5 NNWYSLLLTEVAAYFTSTTLFVSILKNAPSLSW-LMKYGGH 44
>SPAC1F3.03 |||Lgl family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1004
Score = 25.4 bits (53), Expect = 7.8
Identities = 16/47 (34%), Positives = 26/47 (55%)
Frame = +1
Query: 364 AYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 504
A IN+ ++ + L G+E T LE+ +AE I+D + A K+D
Sbjct: 949 AQINDHLAQRGNMLGGIENTMDDLEEMSAEWANEIKDSL--AGTKKD 993
>SPAC521.04c |||calcium permease |Schizosaccharomyces pombe|chr
1|||Manual
Length = 881
Score = 25.4 bits (53), Expect = 7.8
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 132 RRADSPEKTPSVEEIQEKLK 191
RRAD PE+TPS ++ L+
Sbjct: 21 RRADRPEETPSSSVYEQNLR 40
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 25.4 bits (53), Expect = 7.8
Identities = 9/44 (20%), Positives = 25/44 (56%)
Frame = +1
Query: 370 INELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKR 501
+ E + ++ +EG++ + L + +E+ ++E ++TT + R
Sbjct: 407 LKERQVAVRARIEGIKAHEMFLNNRVSEINSSLEKQLTTQKELR 450
>SPAC24C9.15c |spn5|mde9, meu28|septin Spn5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 464
Score = 25.4 bits (53), Expect = 7.8
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +1
Query: 283 SEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYK 462
SEQT A + + K E E L++ KD+ ++K LE++ + K
Sbjct: 391 SEQTQLVEEALTKVMKEKYREKENNLELLETNLKTHHKDYKHALKKRITALEEEKNRLIK 450
Query: 463 AI 468
I
Sbjct: 451 EI 452
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,327,948
Number of Sequences: 5004
Number of extensions: 39298
Number of successful extensions: 207
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 317927284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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