Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0856
         (688 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    28   0.32 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    27   0.42 
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    26   1.3  
AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein p...    26   1.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   3.0  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    24   3.9  
AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.           24   5.2  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   6.8  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   9.0  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    23   9.0  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 27.9 bits (59), Expect = 0.32
 Identities = 25/89 (28%), Positives = 35/89 (39%), Gaps = 5/89 (5%)
 Frame = +3

Query: 150  EKTPSVEEIQEKLKAAEERRRSLEASKMAAIAQKMPRSRRRPHPQRADE*LHRRH----- 314
            E  P+V       +AAE      E      +    PRSRR P   R  E   RR      
Sbjct: 1076 ELVPAVLARAAANEAAEPTGEVEEEEVSPPVPPIPPRSRRLPPSPRTTEMRRRRRNYMQL 1135

Query: 315  QGGSRRQDGDPRGKTRGLHQRAALPSQGS 401
            Q   RR+DG+     +G  +R  +P+  +
Sbjct: 1136 QYRRRRRDGELGDVPQGRQRRGRIPTSAA 1164


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 27.5 bits (58), Expect = 0.42
 Identities = 20/76 (26%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
 Frame = +1

Query: 256 QDRGGVRIRSEQTNNFIVATKEAL-DAKMETHEEKREAYINELRSRLKDHLEGVEKTRLT 432
           QD G  + R  +  + +   +E L DAK++ HE+ R     E+    K  + GV    + 
Sbjct: 471 QDVGTSKERIHELQSELDNVREQLGDAKIDKHEDARRKKKQEVVELFKLEVPGVYDRMIN 530

Query: 433 LEQQTAEVYKAIEDKM 480
           + Q T + Y     K+
Sbjct: 531 MCQPTHKRYNVAVTKV 546


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 21/101 (20%), Positives = 46/101 (45%), Gaps = 2/101 (1%)
 Frame = +1

Query: 325  LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRD 504
            L++     +E+ +    +L  R + H++ +++  LT EQQ  ++   + +  T     R+
Sbjct: 728  LNSAYAKEDERLQEMTRKLHQR-QQHMKKLQQELLTNEQQLQQLAGVVFEGETEETTLRE 786

Query: 505  ETSRR*SSVCAKHEEQVRKVPRRL--TRRSSSSFESAIQEK 621
            E      ++ AK ++ + +   +L   RR+    E   Q K
Sbjct: 787  ELEHS-RTILAKLQKGIEEEQAKLDQVRRTVQQEEQTAQAK 826


>AB090820-1|BAC57915.1|  527|Anopheles gambiae gag-like protein
           protein.
          Length = 527

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 9/25 (36%), Positives = 16/25 (64%)
 Frame = +3

Query: 303 HRRHQGGSRRQDGDPRGKTRGLHQR 377
           HR+HQ    +Q+G  + +  G+HQ+
Sbjct: 270 HRQHQQWPHQQNGQQQQQRMGIHQQ 294


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 16/53 (30%), Positives = 23/53 (43%)
 Frame = +3

Query: 528 RLRET*GTSSQGSAPVNQEKFQQLRERHPGEAAARPPNRRLLIES*TRERNLR 686
           RLRE         A + +EK ++LRE+   E   +    +   E   RER  R
Sbjct: 451 RLREEERAREAREAAIEREKERELREQREREQREKEQREKEQREKEERERQQR 503


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 24.2 bits (50), Expect = 3.9
 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
 Frame = +3

Query: 354 KTRGLHQRAA-LPSQGSS*GC*EDQVDPGTADRGSVQ 461
           +TR + +R   LP +G+  G       PGT DR S+Q
Sbjct: 2   ETRSMRKRTTRLPEEGAPTGA-----GPGTGDRASIQ 33


>AY823259-1|AAX18444.1|  194|Anopheles gambiae pburs protein.
          Length = 194

 Score = 23.8 bits (49), Expect = 5.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 244 LRRCQDRGGVRIRSEQTNNFIVATKEALDAK 336
           L  C D  GVR+   ++    +  KE +D K
Sbjct: 155 LTHCYDPDGVRMTDHESATMEIRLKEPVDCK 185


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 6.8
 Identities = 7/18 (38%), Positives = 15/18 (83%)
 Frame = +3

Query: 156 TPSVEEIQEKLKAAEERR 209
           TP++EE++ + + AE+R+
Sbjct: 298 TPAIEELENECRIAEQRQ 315


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 1/143 (0%)
 Frame = +3

Query: 192 AAEERRRSLEASKMAAIAQKMPRSRRRPHPQRADE*LHR-RHQGGSRRQDGDPRGKTRGL 368
           AA E RR   A   A   +  PR+RR P P       HR   +  ++R   D +G     
Sbjct: 487 AAPEGRRRRRAIARARRRRCRPRARRNP-PATTRPVRHRPTRRKSTKRGKKDDKG----- 540

Query: 369 HQRAALPSQGSS*GC*EDQVDPGTADRGSVQGHRR*DDHSCRQA*RDLQKMIERLRET*G 548
           + R +   + S+     +  D    DR     H   +      + RD  +  +R+R   G
Sbjct: 541 YDRRSGKEERSNDNRYTNGADRDRGDRSKGMNHT--NSFVVEHSRRDRDRDRDRMRSDSG 598

Query: 549 TSSQGSAPVNQEKFQQLRERHPG 617
               G    +++ +++  + + G
Sbjct: 599 KVGGGGGGYDRDDYRRTEKDYRG 621


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 23.0 bits (47), Expect = 9.0
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -1

Query: 121 TPTGSASITSYARPPFDISWQRISVDLVSTSMAST 17
           TP    S+  +ARP  +++   +S+   +T +A T
Sbjct: 650 TPNSVGSLQEFARPYRNMATTPVSIRFTNTVIART 684


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 595,198
Number of Sequences: 2352
Number of extensions: 10415
Number of successful extensions: 34
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 69413730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)