Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0856
(688 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g22795.1 68415.m02704 expressed protein 36 0.019
At1g12080.2 68414.m01397 expressed protein 35 0.058
At4g09950.1 68417.m01628 avirulence-responsive family protein / ... 34 0.077
At1g12080.1 68414.m01396 expressed protein 32 0.31
At5g16730.1 68418.m01959 expressed protein weak similarity to mi... 32 0.41
At2g31130.1 68415.m03801 expressed protein 31 0.72
At1g03830.1 68414.m00364 guanylate-binding family protein contai... 31 0.72
At4g17220.1 68417.m02590 expressed protein 31 0.95
At3g50670.1 68416.m05542 U1 small nuclear ribonucleoprotein 70 (... 31 0.95
At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding protei... 30 1.3
At2g07190.1 68415.m00824 hypothetical protein 30 1.3
At1g23860.2 68414.m03010 splicing factor RSZp21 (RSZP21) / 9G8-l... 30 1.3
At1g23860.1 68414.m03009 splicing factor RSZp21 (RSZP21) / 9G8-l... 30 1.3
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 29 2.2
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 29 2.2
At5g10250.1 68418.m01190 phototropic-responsive protein, putativ... 29 2.9
At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC... 29 3.8
At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC... 29 3.8
At3g28770.1 68416.m03591 expressed protein 29 3.8
At3g26420.1 68416.m03295 glycine-rich RNA-binding protein simila... 29 3.8
At1g67230.1 68414.m07652 expressed protein 29 3.8
At1g40133.1 68414.m04768 hypothetical protein 29 3.8
At5g44180.1 68418.m05406 homeobox transcription factor, putative... 28 5.0
At5g08780.1 68418.m01041 histone H1/H5 family protein contains P... 28 5.0
At4g36470.1 68417.m05179 S-adenosyl-L-methionine:carboxyl methyl... 28 5.0
At2g37080.1 68415.m04550 myosin heavy chain-related low similari... 28 5.0
At5g25870.1 68418.m03069 hypothetical protein 28 6.7
At2g18540.1 68415.m02160 cupin family protein contains Pfam prof... 28 6.7
At1g34170.1 68414.m04238 transcriptional factor B3 family protei... 28 6.7
At1g24706.1 68414.m03104 expressed protein 28 6.7
At5g61040.1 68418.m07660 expressed protein 27 8.8
At5g17890.1 68418.m02098 LIM domain-containing protein / disease... 27 8.8
At4g37820.1 68417.m05351 expressed protein Kaposi's sarcoma-asso... 27 8.8
At3g04450.1 68416.m00472 myb family transcription factor contain... 27 8.8
At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing ... 27 8.8
At1g64330.1 68414.m07290 myosin heavy chain-related similar to m... 27 8.8
At1g52410.2 68414.m05915 caldesmon-related weak similarity to Ca... 27 8.8
>At2g22795.1 68415.m02704 expressed protein
Length = 734
Score = 36.3 bits (80), Expect = 0.019
Identities = 26/129 (20%), Positives = 56/129 (43%)
Frame = +1
Query: 295 NNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIED 474
++F+ TKE D E E + E + KD+ E + T +++ ++ K E+
Sbjct: 495 SSFLEETKEKEDETKEKEESSSQEKTEEKETETKDNEESSSQEE-TKDKENEKIEK--EE 551
Query: 475 KMTTAADKRDETSRR*SSVCAKHEEQVRKVPRRLTRRSSSSFESAIQEKLQQGRRTDVCS 654
+ K +ET + + EE K ++ + S+ E +++ ++ + + S
Sbjct: 552 ASSQEESKENETETKEKEESSSQEETKEKENEKIEKEESAPQEETKEKENEKIEKEESAS 611
Query: 655 LKAEPERET 681
+ E+ET
Sbjct: 612 QEETKEKET 620
>At1g12080.2 68414.m01397 expressed protein
Length = 138
Score = 34.7 bits (76), Expect = 0.058
Identities = 21/75 (28%), Positives = 40/75 (53%)
Frame = +3
Query: 18 VEAMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAA 197
VE E + + TE + +E + EVI PV ++A+ +TP+V E ++K +
Sbjct: 62 VEEAEKKDEETEKKTEEKDE---KTEVITETPVVEEEEKKAEEVTETPAVVEEEKKTEVV 118
Query: 198 EERRRSLEASKMAAI 242
EE++ + A++ A+
Sbjct: 119 EEKQTEVAAAEEVAV 133
>At4g09950.1 68417.m01628 avirulence-responsive family protein /
avirulence induced gene (AIG1) family protein similar to
AIG1 protein SP:P54120 [Arabidopsis thaliana]; contains
Pfam PF04548: AIG1 family;
Length = 336
Score = 34.3 bits (75), Expect = 0.077
Identities = 21/112 (18%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Frame = +1
Query: 295 NNFIVATKEALDAKMETHEEKREAYINELRSRL-KDHLEGVEKTRLTLEQQTAEVYKAIE 471
N + K+ +M+ K+E I++++ L K H E +E + + Q E + ++
Sbjct: 223 NEATIKEKQKQIEEMKGWSSKQE--ISQMKKELEKSHNEMLEGIKEKISNQLKESLEDVK 280
Query: 472 DKMTTAADKRDETSRR*SSVCAKHEEQVRKVPRRLTR--RSSSSFESAIQEK 621
+++ A +R+ET ++ + + +++R++ +L + + ++S + + +K
Sbjct: 281 EQLAKAQAEREETEKKMNEIQKLSSDEIRRLREQLNKAEKETASLRTELNKK 332
>At1g12080.1 68414.m01396 expressed protein
Length = 104
Score = 32.3 bits (70), Expect = 0.31
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +3
Query: 27 MEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAEER 206
+E E K E + K EVI PV ++A+ +TP+V E ++K + EE+
Sbjct: 29 VETEKKDEETEKKTEEKDEKT-EVITETPVVEEEEKKAEEVTETPAVVEEEKKTEVVEEK 87
Query: 207 RRSLEASKMAAI 242
+ + A++ A+
Sbjct: 88 QTEVAAAEEVAV 99
>At5g16730.1 68418.m01959 expressed protein weak similarity to
microtubule binding protein D-CLIP-190 [Drosophila
melanogaster] GI:2773363, SMC2-like condensin
[Arabidopsis thaliana] GI:14279543
Length = 853
Score = 31.9 bits (69), Expect = 0.41
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 120 VPVPRRADSPEKTPSVEEIQEKLKAAEERRRSLEASKMAAI 242
V + +SP+ T + +I+E LK A ER SLE K A+
Sbjct: 85 VAAVKGTESPQTTTRLSQIKEDLKKANERISSLEKDKAKAL 125
Score = 29.1 bits (62), Expect = 2.9
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
Frame = +1
Query: 268 GVRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQT 447
G + T I KE + +ET K++ + RL E V K +E+
Sbjct: 356 GSNDKLHDTETEITDLKERI-VTLETTVAKQKEDLEVSEQRLGSVEEEVSKNEKEVEKLK 414
Query: 448 AEVYKAIEDKMTTAADKRDETSR--R*SSVCAK--HEEQVRKVPRRLTRRSSSSFESAIQ 615
+E+ E+K ++D TSR R S +K + + K ++++ S SA+
Sbjct: 415 SELETVKEEKNRALKKEQDATSRVQRLSEEKSKLLSDLESSKEEEEKSKKAMESLASALH 474
Query: 616 EKLQQGR 636
E +GR
Sbjct: 475 EVSSEGR 481
>At2g31130.1 68415.m03801 expressed protein
Length = 419
Score = 31.1 bits (67), Expect = 0.72
Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +1
Query: 319 EALDAKMETHEEKREAYINELRSRLKDHLEG--VEKTRLTLEQQTAEVYKAIEDKMTTAA 492
E+ D + ET+ E + ++E +S + HL G VE++ + +++ E + DKM
Sbjct: 300 ESDDCRKETNVETSSSSVSEPKSEILQHLSGRSVEESCILVDRD--EFHSVFPDKMEN-- 355
Query: 493 DKRDETSRR*SSVCAKHEEQVRKVPRRLTRR 585
DK + ++ ++ ++ K +RL R+
Sbjct: 356 DKHKPYKKIRDAISSRMKQNREKEYKRLARQ 386
>At1g03830.1 68414.m00364 guanylate-binding family protein contains
Pfam domains PF02263: Guanylate-binding protein,
N-terminal domain and PF02841: Guanylate-binding protein,
C-terminal domain
Length = 991
Score = 31.1 bits (67), Expect = 0.72
Identities = 34/139 (24%), Positives = 57/139 (41%), Gaps = 3/139 (2%)
Frame = +1
Query: 271 VRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEK--TRLT-LEQ 441
VR++ N + K A + +ET E + +EL + HLE +EK RLT +E
Sbjct: 610 VRLQMSLLNEKYESVKSASEL-LETETETLKREKDELDKKCHIHLEELEKLVLRLTNVES 668
Query: 442 QTAEVYKAIEDKMTTAADKRDETSRR*SSVCAKHEEQVRKVPRRLTRRSSSSFESAIQEK 621
+ E K ++ A RD ++ +S+ + E R R + S E
Sbjct: 669 EALEAKKLVDSLKLEAEAARDNENKLQTSLVERCIEIDRAKSRIEELEKVCTLNSGEGEA 728
Query: 622 LQQGRRTDVCSLKAEPERE 678
+ D ++AE R+
Sbjct: 729 SASKKLVDSMKMEAEASRK 747
>At4g17220.1 68417.m02590 expressed protein
Length = 513
Score = 30.7 bits (66), Expect = 0.95
Identities = 22/89 (24%), Positives = 43/89 (48%), Gaps = 2/89 (2%)
Frame = +1
Query: 259 DRGGVRIRSEQTNNFIVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLE 438
D ++ + ++ ++A K ++A + T+EE ++ ELR ++ E + T ++
Sbjct: 11 DTSSLQSQLKEKEKELLAAKAEVEA-LRTNEELKDRVFKELRENVRKLEEKLGATENQVD 69
Query: 439 QQTAEVYKAIEDK--MTTAADKRDETSRR 519
Q+ E K E+K A D +E RR
Sbjct: 70 QKELERKKLEEEKEDALAAQDAAEEALRR 98
>At3g50670.1 68416.m05542 U1 small nuclear ribonucleoprotein 70
(U1-70k)
Length = 427
Score = 30.7 bits (66), Expect = 0.95
Identities = 27/76 (35%), Positives = 35/76 (46%)
Frame = +3
Query: 123 PVPRRADSPEKTPSVEEIQEKLKAAEERRRSLEASKMAAIAQKMPRSRRRPHPQRADE*L 302
P R + S E + EE ++ + +ER RS E S Q RSR RP R D+
Sbjct: 248 PQGRTSQSEEPSRPREEREKSREKGKERERSRELSH----EQPRERSRDRP---REDK-H 299
Query: 303 HRRHQGGSRRQDGDPR 350
HR G R +D D R
Sbjct: 300 HRDRDQGGRDRDRDSR 315
>At3g16000.1 68416.m02024 matrix-localized MAR DNA-binding
protein-related similar to matrix-localized MAR DNA
binding protein MFP1 GI:1771158 from [Lycopersicon
esculentum]
Length = 726
Score = 30.3 bits (65), Expect = 1.3
Identities = 28/130 (21%), Positives = 54/130 (41%), Gaps = 13/130 (10%)
Frame = +1
Query: 316 KEALDAKMETHEEKREAYINEL------RSRLKDHLEGV-------EKTRLTLEQQTAEV 456
KE + ++ ++K E +EL R R+KD LEGV +L+++ E+
Sbjct: 489 KERYERNLDAEKQKNEISASELALEKDLRRRVKDELEGVTHELKESSVKNQSLQKELVEI 548
Query: 457 YKAIEDKMTTAADKRDETSRR*SSVCAKHEEQVRKVPRRLTRRSSSSFESAIQEKLQQGR 636
YK +E +++ V K E+ + R + + E A++ + +
Sbjct: 549 YKKVETSNKELEEEKKTVLSLNKEV--KGMEKQILMEREARKSLETDLEEAVKSLDEMNK 606
Query: 637 RTDVCSLKAE 666
T + S + E
Sbjct: 607 NTSILSRELE 616
Score = 27.5 bits (58), Expect = 8.8
Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 6/120 (5%)
Frame = +1
Query: 319 EALDAKMETHEEKREAYINELRSRLKDH--LEGVEKTRLT----LEQQTAEVYKAIEDKM 480
E L+ ++ T ++E+YI +L S KD+ L+ +T+ L + + + + + +
Sbjct: 342 EELNTRITTLVAEKESYIQKLDSISKDYSALKLTSETQAAADAELISRKEQEIQQLNENL 401
Query: 481 TTAADKRDETSRR*SSVCAKHEEQVRKVPRRLTRRSSSSFESAIQEKLQQGRRTDVCSLK 660
A D +++ + + + K+E+ R + LT + E +K Q R V L+
Sbjct: 402 DRALDDVNKSKDKVADLTEKYEDSKRMLDIELTTVKNLRHELEGTKKTLQASRDRVSDLE 461
>At2g07190.1 68415.m00824 hypothetical protein
Length = 452
Score = 30.3 bits (65), Expect = 1.3
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 340 ETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTT 486
E +EE + +N + + DH K +L ++ TA + A+ DKM +
Sbjct: 267 EGNEENHVSGMNRSKKKQSDHGAETRKKKLLCQRATATTHGALNDKMNS 315
>At1g23860.2 68414.m03010 splicing factor RSZp21 (RSZP21) / 9G8-like
SR protein (SRZ21) nearly identical to 9G8-like splicing
factor SRZ21 [Arabidopsis thaliana] GI:3435096, RSZp21
protein [Arabidopsis thaliana] GI:2582643
Length = 187
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 123 PVPRRADSPEKTPSVEEIQEKLKAAEERRRSLEASKMAAIAQKMP--RSRRRPHPQRADE 296
P PRR SP+ + I + + + RRRS+ + + P R RR P+R D
Sbjct: 116 PSPRRRRSPDYGYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRDSPRRRDS 175
Query: 297 *LHRR 311
RR
Sbjct: 176 PYGRR 180
>At1g23860.1 68414.m03009 splicing factor RSZp21 (RSZP21) / 9G8-like
SR protein (SRZ21) nearly identical to 9G8-like splicing
factor SRZ21 [Arabidopsis thaliana] GI:3435096, RSZp21
protein [Arabidopsis thaliana] GI:2582643
Length = 187
Score = 30.3 bits (65), Expect = 1.3
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 123 PVPRRADSPEKTPSVEEIQEKLKAAEERRRSLEASKMAAIAQKMP--RSRRRPHPQRADE 296
P PRR SP+ + I + + + RRRS+ + + P R RR P+R D
Sbjct: 116 PSPRRRRSPDYGYARRSISPRGRRSPPRRRSVTPPRRGRSYSRSPPYRGSRRDSPRRRDS 175
Query: 297 *LHRR 311
RR
Sbjct: 176 PYGRR 180
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +3
Query: 51 EIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKLKAAEERRRSLEASK 230
E + ++S+ EV EPV V + A+ E+ P+VE + E+ E + ++ S+
Sbjct: 147 ETKIVDVSESTDEAEVQQVEPVDVQPVKDAEKAEEKPTVESVVEEETKDREETKIVDVSE 206
Query: 231 MAAIAQ 248
A Q
Sbjct: 207 SAGDKQ 212
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 29.5 bits (63), Expect = 2.2
Identities = 23/89 (25%), Positives = 36/89 (40%)
Frame = +3
Query: 123 PVPRRADSPEKTPSVEEIQEKLKAAEERRRSLEASKMAAIAQKMPRSRRRPHPQRADE*L 302
PV RR+ +P S RRRS +S+ + ++ P R P P+
Sbjct: 580 PVRRRSPTPVNRRSRRSSSASRSPDRRRRRSPSSSRSPSRSRSPPVLHRSPSPRGRKHQR 639
Query: 303 HRRHQGGSRRQDGDPRGKTRGLHQRAALP 389
RR G R + R + L +R ++P
Sbjct: 640 ERRSPG--RLSEEQDRVQNSKLLKRTSVP 666
>At5g10250.1 68418.m01190 phototropic-responsive protein, putative
similar to root phototropism RPT2 [Arabidopsis thaliana]
gi|6959488|gb|AAF33112, a signal transducer of
phototropic response PMID:10662859
Length = 607
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = +1
Query: 349 EEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEV---YKAIEDKMTTAADKRDETSRR 519
E+KR + NE+ LK+ LE V+K L+ E+ Y+ + K ++ + +
Sbjct: 512 EDKRMSRDNEIIKTLKEELENVKKKMSELQSDYNELQQEYERLSSKQKSSHNWGLRWQKV 571
Query: 520 *SSVCAKHEEQVRKVPRRLTRRSSSSFESAIQEKL 624
S K E++ + R RRSS+ ++ + ++
Sbjct: 572 KKSFQTKREDE--ETRERTRRRSSTGQRTSFRRRM 604
>At5g64200.2 68418.m08063 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +3
Query: 129 PRRADSPEKTPSVEEIQEKLKAAEERRRSLEASKMAAIAQKMPRSRRRPHPQRADE*LHR 308
PRR+ SP ++ S + ++ RRRS + + +K RSR +R +E R
Sbjct: 121 PRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDY-RKRSRSRSYDRRERHEE-KDR 178
Query: 309 RHQGGSRRQDGDPRGKTR 362
H+ +R + P K R
Sbjct: 179 DHRRRTRSRSASPDEKRR 196
>At5g64200.1 68418.m08062 arginine/serine-rich splicing factor SC35
contains similarity to splicing factor; contains Pfam
profile PF00076: RNA recognition motif. (a.k.a. RRM,
RBD, or RNP domain)
Length = 303
Score = 28.7 bits (61), Expect = 3.8
Identities = 22/78 (28%), Positives = 36/78 (46%)
Frame = +3
Query: 129 PRRADSPEKTPSVEEIQEKLKAAEERRRSLEASKMAAIAQKMPRSRRRPHPQRADE*LHR 308
PRR+ SP ++ S + ++ RRRS + + +K RSR +R +E R
Sbjct: 121 PRRSRSPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDY-RKRSRSRSYDRRERHEE-KDR 178
Query: 309 RHQGGSRRQDGDPRGKTR 362
H+ +R + P K R
Sbjct: 179 DHRRRTRSRSASPDEKRR 196
>At3g28770.1 68416.m03591 expressed protein
Length = 2081
Score = 28.7 bits (61), Expect = 3.8
Identities = 27/124 (21%), Positives = 60/124 (48%), Gaps = 3/124 (2%)
Frame = +1
Query: 316 KEALDAKMETHEE-KREAYINELRSRLKDHLEGV--EKTRLTLEQQTAEVYKAIEDKMTT 486
KE+ ++ M+ EE K+E NEL+ + + E E ++L E + + K ED +
Sbjct: 949 KESKNSNMKKKEEDKKEYVNNELKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASK 1008
Query: 487 AADKRDETSRR*SSVCAKHEEQVRKVPRRLTRRSSSSFESAIQEKLQQGRRTDVCSLKAE 666
+K++ ++ +K +E+ +K ++ + +S +E+ + + + LKA+
Sbjct: 1009 NREKKEYEEKK-----SKTKEEAKKEKKKSQDKKREEKDS--EERKSKKEKEESRDLKAK 1061
Query: 667 PERE 678
+ E
Sbjct: 1062 KKEE 1065
>At3g26420.1 68416.m03295 glycine-rich RNA-binding protein similar
to RNA-binding protein (RZ-1) GB:BAA12064 [Nicotiana
sylvestris]; contains Pfam profile: PF00076 RNA
recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Length = 245
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 312 HQGGSRRQDGDPRGKTRGLHQRAALPSQGSS*G 410
HQGG+ R + RG+ RG + + PS G G
Sbjct: 86 HQGGAGRDNDGDRGRDRGYDRDRSRPSGGRGGG 118
>At1g67230.1 68414.m07652 expressed protein
Length = 1132
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 304 IVATKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQ-TAEVYKAIEDK 477
+ ++ALD K+E H+EK N+ RLK + G EK + E+ E K +EDK
Sbjct: 392 VAKREQALDRKLEKHKEKE----NDFDLRLKG-ISGREKALKSEEKALETEKKKLLEDK 445
>At1g40133.1 68414.m04768 hypothetical protein
Length = 663
Score = 28.7 bits (61), Expect = 3.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 289 QTNNFIVATKEALDAKMETHEEKREAYINE 378
+ NN A +A AKME E +REA++N+
Sbjct: 474 EANNRDEALSQAAAAKMEKEEVEREAFVNK 503
>At5g44180.1 68418.m05406 homeobox transcription factor, putative
similar to homeobox transcription factor Hox7/homeotic
protein Hox7 (GI:19486) {Lycopersicon peruvianum};
similar to GP|4165087| Williams-Beuren syndrome deletion
transcript 9 [Homo sapiens]; contains Pfam PF02791: DDT
domain and Pfam PF00046: Homeobox domain
Length = 1694
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 1/109 (0%)
Frame = +1
Query: 316 KEALDAKMETHEEKREAYINELRSRLKDH-LEGVEKTRLTLEQQTAEVYKAIEDKMTTAA 492
K +D + H++ E+ + +D +E+ R E + A +A E ++
Sbjct: 291 KSYMDTAAQVHDDPFVKSEREVGNEDEDDDALQLERHRKNEEARIAREVEAHEKRIRREL 350
Query: 493 DKRDETSRR*SSVCAKHEEQVRKVPRRLTRRSSSSFESAIQEKLQQGRR 639
+K+D R K EEQ+RK R R E ++EK ++ R
Sbjct: 351 EKQDMLRR-------KREEQIRKEMERQDRERRKEEERLLREKQREEER 392
>At5g08780.1 68418.m01041 histone H1/H5 family protein contains Pfam
domain, PF00538: linker histone H1 and H5 family
Length = 457
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/74 (24%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 18 VEAMEVETKSTEIRCQEMSKGGLAYEV-ILAEPVGVPVPRRADSPEKTPSVEEIQEKLKA 194
VE ++VE E R + S+GG YEV +L + V + +T S+ + +
Sbjct: 229 VEVVDVENSENEARIEANSRGGELYEVAVLYKQNDVLMEESGKEAMETSSIVRKAKLRRT 288
Query: 195 AEERRRSLEASKMA 236
+ + ++E + A
Sbjct: 289 SNTTKENVEVTSEA 302
>At4g36470.1 68417.m05179 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to SAM:jasmonic
acid carboxyl methyltransferase (JMT)[GI:13676829] and
to SAM:salicylic acid carboxyl methyltransferase
(SAMT)[GI:6002712][Clarkia breweri]
Length = 371
Score = 28.3 bits (60), Expect = 5.0
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +1
Query: 325 LDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAAD 495
L A+ ET EEK ++Y + D +EG + E + E+ + +DK T D
Sbjct: 254 LVAQGETEEEKLDSYDMHFYAPSADEIEGEVDKEGSFELERLEMLEVKKDKGNTEGD 310
>At2g37080.1 68415.m04550 myosin heavy chain-related low similarity
to myosin heavy chain [Rana catesbeiana] GI:4249701
Length = 583
Score = 28.3 bits (60), Expect = 5.0
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = +3
Query: 132 RRADSPEKTPSVEEIQEKLKAAEERRRSLEASKMAA 239
R +PE + ++QE+LK A+E+ + EA K A
Sbjct: 72 RTGKTPELASQISQLQEELKKAKEQLSASEALKKEA 107
>At5g25870.1 68418.m03069 hypothetical protein
Length = 173
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +1
Query: 352 EKREAYINELRSRLKDHLEGVEKT---RLTLEQQTAEVYKAIEDKMTTAADKRDETSRR* 522
EK+ + E+ +R ++L+ EKT + E + + K +ED+M A DE R
Sbjct: 85 EKKYYELEEVENR--ENLQMKEKTLKRKYKRELKKSSKIKELEDRMIKAGQINDEHEREL 142
Query: 523 SSVCAKHEE 549
C+K +E
Sbjct: 143 KKKCSKIKE 151
>At2g18540.1 68415.m02160 cupin family protein contains Pfam profile
PF00190: Cupin
Length = 707
Score = 27.9 bits (59), Expect = 6.7
Identities = 14/77 (18%), Positives = 38/77 (49%)
Frame = +3
Query: 132 RRADSPEKTPSVEEIQEKLKAAEERRRSLEASKMAAIAQKMPRSRRRPHPQRADE*LHRR 311
+R + + EE++ K++ +ER+R E +K ++ + R ++ +E +R
Sbjct: 577 KRREQERQRKEREEVERKIREEQERKREEEMAKRRE-QERQKKEREEMERKKREEEARKR 635
Query: 312 HQGGSRRQDGDPRGKTR 362
+ ++ ++ + + K R
Sbjct: 636 EEEMAKIREEERQRKER 652
>At1g34170.1 68414.m04238 transcriptional factor B3 family protein
contains Pfam profile: PF02362 B3 DNA binding domain;
contains non-consensus GA donor splice site at intron 12
Length = 623
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/61 (26%), Positives = 29/61 (47%)
Frame = +1
Query: 337 METHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDETSR 516
+ + +E + N RSR+K H++GV +R ++ Y + K+ D +DE
Sbjct: 495 LRSPKEVQSTEFNFTRSRIKVHMQGVAISR-AVDLTAMHGYNQLIQKLEELFDLKDELRT 553
Query: 517 R 519
R
Sbjct: 554 R 554
>At1g24706.1 68414.m03104 expressed protein
Length = 1781
Score = 27.9 bits (59), Expect = 6.7
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +1
Query: 382 RSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDETSRR*SSVCAKHEEQVRK 561
R+R + + TLE+ AI K ++ E+ R + KHEE V
Sbjct: 934 RNRYESEISKQHTALKTLEEVADNSSSAIT-KRKKEKERIQESLDRLTGELKKHEEHVAS 992
Query: 562 VPRRLTRRSSSSFES 606
V RRL+R + S
Sbjct: 993 VRRRLSREKDTWLSS 1007
>At5g61040.1 68418.m07660 expressed protein
Length = 590
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +1
Query: 283 SEQTNNFIVATKEALDA-KMETHEEKREAYINELRSRLKDHLEGVEKTR 426
S ++F V +E LD +E EEK ++NE+ +L + VEKT+
Sbjct: 521 SHHKDDFKVQEQELLDLIGIEDEEEKSSDFVNEMEKQLIKQI--VEKTK 567
>At5g17890.1 68418.m02098 LIM domain-containing protein / disease
resistance protein-related low similarity to disease
resistance protein RPP4 [Arabidopsis thaliana]
GI:20270890; contains Pfam profiles PF00412: LIM domain,
PF00931: NB-ARC domain, PF00560: Leucine Rich Repeat
Length = 1613
Score = 27.5 bits (58), Expect = 8.8
Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Frame = +3
Query: 9 RLKVEAMEVETKSTEIRCQEMSKGGLAYEVILAEPVGVPVPRRADSPEKTPSVEEIQEKL 188
R E ++ + S+++R SKG + ++ + P+ P R+ S T E ++E L
Sbjct: 1073 RSSSELQKLSSTSSKVR----SKGNVFWKWLGCFPLQ-PKNLRSRSRRTTALEEALEEAL 1127
Query: 189 KAAE--ERRRSLEASKMAAIA-QKMPRSRRRPHPQRADE*LHRRHQGGSRRQDGDPRGKT 359
K E E R L+ + + + +K+ ++ R + ADE R+H ++ + K
Sbjct: 1128 KEREKLEDTRELQIALIESKKIKKIKQADERDQIKHADEREQRKHSKDHEEEEIESNEKE 1187
Query: 360 RGLHQR 377
H +
Sbjct: 1188 ERRHSK 1193
>At4g37820.1 68417.m05351 expressed protein Kaposi's
sarcoma-associated herpes-like virus ORF73gene, Kaposi's
sarcoma-associated herpesvirus, U52064
Length = 532
Score = 27.5 bits (58), Expect = 8.8
Identities = 24/123 (19%), Positives = 49/123 (39%)
Frame = +1
Query: 313 TKEALDAKMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAA 492
TK D K + + E+ + E KD ++++ E++ K E+ +
Sbjct: 293 TKNEEDEKEKVQSSEEESKVKESGKNEKDASSSQDESK---EEKPERKKK--EESSSQGE 347
Query: 493 DKRDETSRR*SSVCAKHEEQVRKVPRRLTRRSSSSFESAIQEKLQQGRRTDVCSLKAEPE 672
K +E +R + EE + P + +SSS E ++ + + + S +
Sbjct: 348 GKEEEPEKREKEDSSSQEESKEEEPENKEKEASSSQEENEIKETEIKEKEESSSQEGNEN 407
Query: 673 RET 681
+ET
Sbjct: 408 KET 410
>At3g04450.1 68416.m00472 myb family transcription factor contains
Pfam profile: PF00249 myb-like DNA-binding domain
Length = 438
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/89 (24%), Positives = 42/89 (47%)
Frame = +1
Query: 376 ELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDETSRR*SSVCAKHEEQV 555
+++ +L + LE +L +E+Q + IE + +K+D TS S A
Sbjct: 333 KVQKQLHEQLEIQRSLQLQIEEQGRYLQMMIEKQQKMQENKKDSTSSS-SMPEADPSAPS 391
Query: 556 RKVPRRLTRRSSSSFESAIQEKLQQGRRT 642
+ + ++++S E +I +KLQ G T
Sbjct: 392 PNLSQPFLHKATNS-EPSITQKLQNGSST 419
>At2g16940.1 68415.m01952 RNA recognition motif (RRM)-containing
protein
Length = 561
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/115 (17%), Positives = 49/115 (42%)
Frame = +1
Query: 334 KMETHEEKREAYINELRSRLKDHLEGVEKTRLTLEQQTAEVYKAIEDKMTTAADKRDETS 513
+ + + +R+ + + R +D + V+K + + + K D+ + D + S
Sbjct: 69 RSRSRDRERDRHRSSREHRDRDREKDVDKEERNGKDRERDRDK---DRDSKGRDHEKDRS 125
Query: 514 RR*SSVCAKHEEQVRKVPRRLTRRSSSSFESAIQEKLQQGRRTDVCSLKAEPERE 678
RR S +H Q R+ + + + + + + ++ D +A+PER+
Sbjct: 126 RRSRSRSERHRSQEREKSLEIEPKERETKDRDRDRRRHKDKKEDKVEPEADPERD 180
>At1g64330.1 68414.m07290 myosin heavy chain-related similar to
myosin heavy chain (GI:1850913) [Entamoeba histolytica];
similar to Intracellular protein transport protein USO1
(Swiss-Prot:P25386) [Saccharomyces cerevisiae]
Length = 555
Score = 27.5 bits (58), Expect = 8.8
Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Frame = +1
Query: 313 TKEALDAKMETHEEKREAYINELRSRLKDH---LEGVEKTRLTLEQQTAEVYKAIEDK 477
T+ L+ K+E +++R+ EL S+ KDH LE V + + + AE+ + ++K
Sbjct: 196 TESDLNQKLEDVKKERDGLEAELASKAKDHESTLEEVNRLQGQKNETEAELEREKQEK 253
>At1g52410.2 68414.m05915 caldesmon-related weak similarity to
Caldesmon (CDM) (Swiss-Prot:P12957) [Gallus gallus]
Length = 759
Score = 27.5 bits (58), Expect = 8.8
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Frame = +1
Query: 328 DAKMETHEEKREAYINELRSRLKDHLEGVEKTRLT-------LEQQTAEVYKAIE--DKM 480
D E H KR++ + + + +EG+E +++ E+Q+A+ +E ++
Sbjct: 209 DKDDEEHSAKRKSMLEAIEREFEAAMEGIEALKVSDSTGSGDDEEQSAKRLSMLEEIERE 268
Query: 481 TTAADKRDETSRR*SSVCAKHEEQVRKVPRRLTRRSSSSFESAIQEKLQQ 630
AA K E R S +EE+ + L FE+A E L+Q
Sbjct: 269 FEAASKGLEQLRASDSTADNNEEEHAAKGQSLLEEIEREFEAA-TESLKQ 317
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,949,624
Number of Sequences: 28952
Number of extensions: 232646
Number of successful extensions: 1191
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1112
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1187
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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