Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0854
         (545 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   0.76 
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   9.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.2 bits (50), Expect = 0.76
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +2

Query: 371 FICVRITNRMYIMNYKXKIMYVLWILVYLIDLLTNQHF--NTSYYTFIFILM 520
           F CV IT  ++++       + + +L Y   ++   HF   T Y+ + FI++
Sbjct: 59  FYCVSITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLLCTYYFYYAFIIL 110


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/30 (26%), Positives = 16/30 (53%)
 Frame = +1

Query: 319 YLVPADAVQ*CFVIRIIVYLCKDYEQNVHN 408
           +++PA  +  C+ I II    K+ +  + N
Sbjct: 194 FIIPASIIATCYAIIIITIWSKNAKGFIKN 223


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 245 SRLLKQTFVFRAIAITR 195
           +R  +QTF+F AI   R
Sbjct: 183 TRYARQTFIFSAIPFLR 199


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,981
Number of Sequences: 336
Number of extensions: 2140
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)