Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0854
         (545 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U72395-1|AAB68948.1|  890|Homo sapiens MIP protein.                    31   3.5  
U72069-1|AAB58254.1|  890|Homo sapiens karyopherin beta2 protein.      31   3.5  
U70322-1|AAC50723.1|  890|Homo sapiens transportin protein.            31   3.5  
BC040340-1|AAH40340.1|  890|Homo sapiens transportin 1 protein.        31   3.5  

>U72395-1|AAB68948.1|  890|Homo sapiens MIP protein.
          Length = 890

 Score = 30.7 bits (66), Expect = 3.5
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = -2

Query: 493 TRIKMLVGQ*INQINKYPQYVHYFXFIIHYVHSVRNPYTNKQ*FVLRSIIALRLQ 329
           T I+  V Q + Q+N+YP + +Y  F++  + S   P  +    +L++ +    Q
Sbjct: 27  TTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQ 81


>U72069-1|AAB58254.1|  890|Homo sapiens karyopherin beta2 protein.
          Length = 890

 Score = 30.7 bits (66), Expect = 3.5
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = -2

Query: 493 TRIKMLVGQ*INQINKYPQYVHYFXFIIHYVHSVRNPYTNKQ*FVLRSIIALRLQ 329
           T I+  V Q + Q+N+YP + +Y  F++  + S   P  +    +L++ +    Q
Sbjct: 27  TTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQ 81


>U70322-1|AAC50723.1|  890|Homo sapiens transportin protein.
          Length = 890

 Score = 30.7 bits (66), Expect = 3.5
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = -2

Query: 493 TRIKMLVGQ*INQINKYPQYVHYFXFIIHYVHSVRNPYTNKQ*FVLRSIIALRLQ 329
           T I+  V Q + Q+N+YP + +Y  F++  + S   P  +    +L++ +    Q
Sbjct: 27  TTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQ 81


>BC040340-1|AAH40340.1|  890|Homo sapiens transportin 1 protein.
          Length = 890

 Score = 30.7 bits (66), Expect = 3.5
 Identities = 14/55 (25%), Positives = 28/55 (50%)
 Frame = -2

Query: 493 TRIKMLVGQ*INQINKYPQYVHYFXFIIHYVHSVRNPYTNKQ*FVLRSIIALRLQ 329
           T I+  V Q + Q+N+YP + +Y  F++  + S   P  +    +L++ +    Q
Sbjct: 27  TTIQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSEDEPTRSLSGLILKNNVKAHFQ 81


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,077,350
Number of Sequences: 237096
Number of extensions: 1015255
Number of successful extensions: 974
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 974
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5364536570
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)