Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0853
         (740 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    27   0.21 
AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochr...    23   3.4  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   6.0  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   7.9  
AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6 prot...    21   7.9  
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           21   7.9  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   7.9  

>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 26.6 bits (56), Expect = 0.21
 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
 Frame = +1

Query: 526 KREDPMVE--LFPDDDHDDNRNNKSDVADAADALRPASERRV 645
           K+ED  VE  L   DD D+N     D  D  ++L P+S   V
Sbjct: 22  KKEDEEVEHRLSDRDDDDENITVDDDDTDGRESLSPSSAHTV 63


>AF265300-1|AAG17643.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 126

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 293 LKVRCQSRHYLSF 255
           L  RCQ RHY S+
Sbjct: 114 LPERCQQRHYYSY 126


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 18/63 (28%), Positives = 25/63 (39%), Gaps = 8/63 (12%)
 Frame = +2

Query: 548 SCSLXXXXXXXGIINPMSPTP--------PMHFAQQVNAGLRDSGPPAQAPQPGSYSTRS 703
           SC+         ++NP SP P        P+ + Q    G+ D G   Q  QP S  + S
Sbjct: 370 SCTHYQNPEYISVVNPESPYPQIGSERATPVGYHQNEVGGVIDDGGSGQ-NQPESPESSS 428

Query: 704 QGP 712
             P
Sbjct: 429 STP 431


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -3

Query: 711 GPCERVLYEPGCGACAGG 658
           GP    L  PGCG   GG
Sbjct: 381 GPSLTPLASPGCGPGQGG 398


>AY873916-1|AAW67572.1|  377|Tribolium castaneum chitinase 6
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = +2

Query: 617 HFAQQVNAGLRDSGPPAQAPQPGSYSTRSQG 709
           H    V+A   D G P+  P P    T + G
Sbjct: 259 HAFTLVDASQHDLGSPSSGPAPPGDFTENMG 289


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 599 SPTPPMHFAQQV 634
           +PTPP H+  Q+
Sbjct: 144 NPTPPPHYTYQI 155


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = -3

Query: 711 GPCERVLYEPGCGACAGG 658
           GP    L  PGCG   GG
Sbjct: 381 GPSLTPLASPGCGPGQGG 398


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,735
Number of Sequences: 336
Number of extensions: 2992
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)