Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0853
         (740 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           27   0.80 
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.    25   1.9  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   4.3  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   7.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   7.5  
AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription fact...    23   7.5  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   9.9  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    23   9.9  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 26.6 bits (56), Expect = 0.80
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = -3

Query: 270 SLPELPQSKIDSFDALLYQRSLFIFVFRVGCEASQQLRVLGPQ 142
           ++P+LPQ  +DS D L   RS  +   R      Q+L++L PQ
Sbjct: 448 NIPDLPQGLMDSADLLPKYRSDLVGKIRA---LRQELQLLQPQ 487


>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
          Length = 1229

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 16/54 (29%), Positives = 25/54 (46%)
 Frame = +1

Query: 52  KKIESLGRMTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLATNTEHENEKAS 213
           KKIES        QE+++   +T   GLE  +    +L   + T+ E  +E  S
Sbjct: 432 KKIESEKNEALKRQEKLIDHIKTSRLGLEEQKRIKAELSQDVGTSKERIHELQS 485


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 4.3
 Identities = 16/59 (27%), Positives = 27/59 (45%)
 Frame = +1

Query: 46  ERKKIESLGRMTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLATNTEHENEKASLVK 222
           ER+K+ESL      T++++      +    EAL    T+L        E+ NE+  L +
Sbjct: 504 ERRKLESLRYSYEETEKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEERELTQ 562


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = -3

Query: 684  PGCGACAGGPESRNPA-FTC 628
            P C +CAG PE+ + A F C
Sbjct: 1006 PDCRSCAGVPENAHHAIFEC 1025


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +3

Query: 258 AQVMTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDE 371
           A V +  A H   +E  K+    +VRRL +  AW  ++
Sbjct: 375 ATVASVFAQHDTELERIKRYSTPKVRRLLEVLAWFGEQ 412


>AJ439353-9|CAD27931.1|  391|Anopheles gambiae transcription factor
           protein.
          Length = 391

 Score = 23.4 bits (48), Expect = 7.5
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 402 KPAGVAELQPARPSARRSLGT 340
           +P   AE +PA+ S RR +GT
Sbjct: 66  EPISDAEEEPAKGSKRRKVGT 86


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
            protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 659  PPAQAPQPGSYSTRSQ 706
            PP Q P PGS S   Q
Sbjct: 1153 PPGQQPSPGSRSYNGQ 1168


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 23.0 bits (47), Expect = 9.9
 Identities = 13/44 (29%), Positives = 21/44 (47%)
 Frame = +1

Query: 547 ELFPDDDHDDNRNNKSDVADAADALRPASERRVTRFRAACASST 678
           ELF   +  ++ NNK  ++  ++ L   SE   T    A A+ T
Sbjct: 490 ELFVGQEKGNDDNNKEKMSIRSEGLESVSEITRTTAPTATAAGT 533


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 666,372
Number of Sequences: 2352
Number of extensions: 12316
Number of successful extensions: 28
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76091949
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)