Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0853
(740 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light c... 59 3e-09
Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light c... 59 3e-09
U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light ... 59 3e-09
U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light ... 59 3e-09
U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light ... 59 3e-09
U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light ... 59 3e-09
Z68337-2|CAA92746.2| 516|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 30 1.5
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 30 1.5
L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembl... 29 2.6
AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein... 29 2.6
AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical ... 29 2.6
AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix metall... 29 2.6
Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical p... 29 3.5
Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical pr... 29 3.5
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 3.5
U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer ... 29 4.6
U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer ... 29 4.6
U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer ... 29 4.6
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 29 4.6
AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein. 29 4.6
Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical pr... 28 6.0
X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin prot... 28 6.0
Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical p... 28 8.0
AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical ... 28 8.0
AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z29645-1|CAA82753.1| 522|Caenorhabditis elegans kinesin light
chain (isoform 2) protein.
Length = 522
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 249 IGEAQVMTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRV 416
+ E +M + Q ++A+ QK + Q RRLCQENAWLRDEL++ Q LQ SEQ V
Sbjct: 88 VDETSLMLMVFQLTQGMDAQHQKYQAQRRRLCQENAWLRDELSSTQIKLQQSEQMV 143
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +1
Query: 31 LSSYLERKKIESLGRMTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLATNTEH-ENEK 207
+ +Y +RK IESL +M+ M+Q+++ G RTV GLEALR EH+ + L T+ + + ++
Sbjct: 8 IQAYRQRK-IESLAKMSNMSQDDVTTGLRTVQQGLEALREEHSTISNTLETSVKGVKEDE 66
Query: 208 ASLVKKSIEAID 243
A L K+ + I+
Sbjct: 67 APLPKQKLSQIN 78
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/31 (67%), Positives = 22/31 (70%)
Frame = +3
Query: 642 GYEIPGRLRKLHNLVHTVRVRKGRYXVAVPL 734
GYEIP RLR LHNLV +GRY VAVPL
Sbjct: 220 GYEIPARLRTLHNLV-IQYASQGRYEVAVPL 249
Score = 35.1 bits (77), Expect = 0.053
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 419 QLEEENKHLEFMASIRKYDSDINEES 496
QLEEENKHL++MASI++ D ++
Sbjct: 145 QLEEENKHLKYMASIKQLDDGTQSDT 170
>Z29644-1|CAA82752.1| 540|Caenorhabditis elegans kinesin light
chain (isoform 1) protein.
Length = 540
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 249 IGEAQVMTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRV 416
+ E +M + Q ++A+ QK + Q RRLCQENAWLRDEL++ Q LQ SEQ V
Sbjct: 67 VDETSLMLMVFQLTQGMDAQHQKYQAQRRRLCQENAWLRDELSSTQIKLQQSEQMV 122
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/31 (67%), Positives = 22/31 (70%)
Frame = +3
Query: 642 GYEIPGRLRKLHNLVHTVRVRKGRYXVAVPL 734
GYEIP RLR LHNLV +GRY VAVPL
Sbjct: 199 GYEIPARLRTLHNLV-IQYASQGRYEVAVPL 228
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 76 MTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLATNTEH-ENEKASLVKKSIEAID 243
M+ M+Q+++ G RTV GLEALR EH+ + L T+ + + ++A L K+ + I+
Sbjct: 1 MSNMSQDDVTTGLRTVQQGLEALREEHSTISNTLETSVKGVKEDEAPLPKQKLSQIN 57
Score = 35.1 bits (77), Expect = 0.053
Identities = 14/26 (53%), Positives = 20/26 (76%)
Frame = +2
Query: 419 QLEEENKHLEFMASIRKYDSDINEES 496
QLEEENKHL++MASI++ D ++
Sbjct: 124 QLEEENKHLKYMASIKQLDDGTQSDT 149
>U55369-14|AAN84862.1| 540|Caenorhabditis elegans Kinesin light
chain protein 2,isoform b protein.
Length = 540
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 249 IGEAQVMTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRV 416
+ E +M + Q ++A+ QK + Q RRLCQENAWLRDEL++ Q LQ SEQ V
Sbjct: 67 VDETSLMLMVFQLTQGMDAQHQKYQAQRRRLCQENAWLRDELSSTQIKLQQSEQMV 122
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/31 (67%), Positives = 22/31 (70%)
Frame = +3
Query: 642 GYEIPGRLRKLHNLVHTVRVRKGRYXVAVPL 734
GYEIP RLR LHNLV +GRY VAVPL
Sbjct: 199 GYEIPARLRTLHNLV-IQYASQGRYEVAVPL 228
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 76 MTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLATNTEH-ENEKASLVKKSIEAID 243
M+ M+Q+++ G RTV GLEALR EH+ + L T+ + + ++A L K+ + I+
Sbjct: 1 MSNMSQDDVTTGLRTVQQGLEALREEHSTISNTLETSVKGVKEDEAPLPKQKLSQIN 57
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 419 QLEEENKHLEFMASIRKYDSDINEES 496
QLEEENKHL++MASI+++D ++
Sbjct: 124 QLEEENKHLKYMASIKQFDDGTQSDT 149
>U55369-13|AAN84863.1| 501|Caenorhabditis elegans Kinesin light
chain protein 2,isoform c protein.
Length = 501
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 249 IGEAQVMTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRV 416
+ E +M + Q ++A+ QK + Q RRLCQENAWLRDEL++ Q LQ SEQ V
Sbjct: 67 VDETSLMLMVFQLTQGMDAQHQKYQAQRRRLCQENAWLRDELSSTQIKLQQSEQMV 122
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/31 (67%), Positives = 22/31 (70%)
Frame = +3
Query: 642 GYEIPGRLRKLHNLVHTVRVRKGRYXVAVPL 734
GYEIP RLR LHNLV +GRY VAVPL
Sbjct: 199 GYEIPARLRTLHNLV-IQYASQGRYEVAVPL 228
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 76 MTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLATNTEH-ENEKASLVKKSIEAID 243
M+ M+Q+++ G RTV GLEALR EH+ + L T+ + + ++A L K+ + I+
Sbjct: 1 MSNMSQDDVTTGLRTVQQGLEALREEHSTISNTLETSVKGVKEDEAPLPKQKLSQIN 57
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 419 QLEEENKHLEFMASIRKYDSDINEES 496
QLEEENKHL++MASI+++D ++
Sbjct: 124 QLEEENKHLKYMASIKQFDDGTQSDT 149
>U55369-12|AAK52182.1| 522|Caenorhabditis elegans Kinesin light
chain protein 2,isoform a protein.
Length = 522
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 249 IGEAQVMTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRV 416
+ E +M + Q ++A+ QK + Q RRLCQENAWLRDEL++ Q LQ SEQ V
Sbjct: 88 VDETSLMLMVFQLTQGMDAQHQKYQAQRRRLCQENAWLRDELSSTQIKLQQSEQMV 143
Score = 52.0 bits (119), Expect = 4e-07
Identities = 28/72 (38%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Frame = +1
Query: 31 LSSYLERKKIESLGRMTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLATNTEH-ENEK 207
+ +Y +RK IESL +M+ M+Q+++ G RTV GLEALR EH+ + L T+ + + ++
Sbjct: 8 IQAYRQRK-IESLAKMSNMSQDDVTTGLRTVQQGLEALREEHSTISNTLETSVKGVKEDE 66
Query: 208 ASLVKKSIEAID 243
A L K+ + I+
Sbjct: 67 APLPKQKLSQIN 78
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/31 (67%), Positives = 22/31 (70%)
Frame = +3
Query: 642 GYEIPGRLRKLHNLVHTVRVRKGRYXVAVPL 734
GYEIP RLR LHNLV +GRY VAVPL
Sbjct: 220 GYEIPARLRTLHNLV-IQYASQGRYEVAVPL 249
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 419 QLEEENKHLEFMASIRKYDSDINEES 496
QLEEENKHL++MASI+++D ++
Sbjct: 145 QLEEENKHLKYMASIKQFDDGTQSDT 170
>U55369-11|AAT68902.1| 531|Caenorhabditis elegans Kinesin light
chain protein 2,isoform d protein.
Length = 531
Score = 59.3 bits (137), Expect = 3e-09
Identities = 28/56 (50%), Positives = 37/56 (66%)
Frame = +3
Query: 249 IGEAQVMTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRV 416
+ E +M + Q ++A+ QK + Q RRLCQENAWLRDEL++ Q LQ SEQ V
Sbjct: 67 VDETSLMLMVFQLTQGMDAQHQKYQAQRRRLCQENAWLRDELSSTQIKLQQSEQMV 122
Score = 41.1 bits (92), Expect = 8e-04
Identities = 21/31 (67%), Positives = 22/31 (70%)
Frame = +3
Query: 642 GYEIPGRLRKLHNLVHTVRVRKGRYXVAVPL 734
GYEIP RLR LHNLV +GRY VAVPL
Sbjct: 199 GYEIPARLRTLHNLV-IQYASQGRYEVAVPL 228
Score = 40.7 bits (91), Expect = 0.001
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Frame = +1
Query: 76 MTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLATNTEH-ENEKASLVKKSIEAID 243
M+ M+Q+++ G RTV GLEALR EH+ + L T+ + + ++A L K+ + I+
Sbjct: 1 MSNMSQDDVTTGLRTVQQGLEALREEHSTISNTLETSVKGVKEDEAPLPKQKLSQIN 57
Score = 36.7 bits (81), Expect = 0.017
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = +2
Query: 419 QLEEENKHLEFMASIRKYDSDINEES 496
QLEEENKHL++MASI+++D ++
Sbjct: 124 QLEEENKHLKYMASIKQFDDGTQSDT 149
>Z68337-2|CAA92746.2| 516|Caenorhabditis elegans Hypothetical
protein M7.2 protein.
Length = 516
Score = 43.2 bits (97), Expect = 2e-04
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = +3
Query: 255 EAQVMTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRV 416
EA ++ + +QS + + K +R L QEN WL DEL Q+ LQ SE+ V
Sbjct: 69 EASLLIMMDKLMQSYDVQLSKNHESIRLLRQENTWLLDELTTTQRKLQESERTV 122
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 58 IESLGRMTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLATNTEHENEKASLVKKSIE 234
IES ++EM +G RT+ LEA +AE T+ L + E+ ++K I+
Sbjct: 915 IESFNSRIEEFEKEMASGKRTIER-LEAEKAEETEKLVVFTGTQSQKQEELEKLQKEIQ 972
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 58 IESLGRMTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLATNTEHENEKASLVKKSIE 234
IES ++EM +G RT+ LEA +AE T+ L + E+ ++K I+
Sbjct: 917 IESFNSRIEEFEKEMASGKRTIER-LEAEKAEETEKLVVFTGTQSQKQEELEKLQKEIQ 974
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/59 (30%), Positives = 29/59 (49%)
Frame = +1
Query: 58 IESLGRMTAMTQEEMVAGARTVAAGLEALRAEHTQLLAGLATNTEHENEKASLVKKSIE 234
IES ++EM +G RT+ LEA +AE T+ L + E+ ++K I+
Sbjct: 917 IESFNSRIEEFEKEMASGKRTIER-LEAEKAEETEKLVVFTGTQSQKQEELEKLQKEIQ 974
>L10986-9|AAK93847.2| 808|Caenorhabditis elegans Spindle assembly
abnormal protein 4 protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 285 HLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVH 419
H+ ++QKL ++RR N LRD +A HL +E+ VH
Sbjct: 308 HVPGSSLDRQKLEIEIRRHRNLNIQLRDTIA----HLDYAEESVH 348
>AJ539470-1|CAD62434.1| 808|Caenorhabditis elegans SAS-4 protein
protein.
Length = 808
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/45 (35%), Positives = 24/45 (53%)
Frame = +3
Query: 285 HLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVH 419
H+ ++QKL ++RR N LRD +A HL +E+ VH
Sbjct: 308 HVPGSSLDRQKLEIEIRRHRNLNIQLRDTIA----HLDYAEESVH 348
>AF022971-4|AAG23982.2| 579|Caenorhabditis elegans Hypothetical
protein C31B8.8 protein.
Length = 579
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +2
Query: 185 TRNTKMKRLLW*RRASKLSILDWGS-SGNDGSGISPSVRRGREAKTPHAGSQAVPRERLA 361
+R T + LW S S DWGS SG+ G G S S G P P +
Sbjct: 351 SRTTTRRTTLWPTTQSPFSGDDWGSGSGSSGRGGSSSGSSG--GGCPSHIDAYTPSSSFS 408
Query: 362 EGRAGCSSATPAGFRTTRTQ 421
+G T +G + T+ Q
Sbjct: 409 YAFSGSQVYTISGTKVTKVQ 428
>AB007815-1|BAA28351.1| 579|Caenorhabditis elegans matrix
metalloproteinase protein.
Length = 579
Score = 29.5 bits (63), Expect = 2.6
Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Frame = +2
Query: 185 TRNTKMKRLLW*RRASKLSILDWGS-SGNDGSGISPSVRRGREAKTPHAGSQAVPRERLA 361
+R T + LW S S DWGS SG+ G G S S G P P +
Sbjct: 351 SRTTTRRTTLWPTTQSPFSGDDWGSGSGSSGRGGSSSGSSG--GGCPSHIDAYTPSSSFS 408
Query: 362 EGRAGCSSATPAGFRTTRTQ 421
+G T +G + T+ Q
Sbjct: 409 YAFSGSQVYTISGTKVTKVQ 428
>Z81077-17|CAB82212.1| 2944|Caenorhabditis elegans Hypothetical
protein F36A2.13 protein.
Length = 2944
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 484 KRRVGQ*PSGQGEKKREDPMVELFPDDDHDDNRNNKSDVADAADALRPASERR 642
+ R GQ GE D + DDD ++ ++ D D D+ RPA ER+
Sbjct: 1678 EERNGQPREFDGESSSSDDDNDDDDDDDDEEEDDDDDDDDDDEDSDRPAEERQ 1730
>Z75952-7|CAB82204.1| 2944|Caenorhabditis elegans Hypothetical protein
F36A2.13 protein.
Length = 2944
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +1
Query: 484 KRRVGQ*PSGQGEKKREDPMVELFPDDDHDDNRNNKSDVADAADALRPASERR 642
+ R GQ GE D + DDD ++ ++ D D D+ RPA ER+
Sbjct: 1678 EERNGQPREFDGESSSSDDDNDDDDDDDDEEEDDDDDDDDDDEDSDRPAEERQ 1730
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +2
Query: 581 GIINPMSPTPPMHFAQQVNAGLRDSGPPAQAPQP 682
GI NP+ P PP+ + Q + PP P P
Sbjct: 110 GINNPVQPPPPVQYQNQGPQYIEAPPPPPSPPPP 143
>U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform c protein.
Length = 796
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 330 PACGVFASLPRRTEGEMPEPSLPE 259
P CGV PR T+GE+ E +PE
Sbjct: 503 PICGVTVVRPRMTDGEVLENIMPE 526
>U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform a protein.
Length = 892
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 330 PACGVFASLPRRTEGEMPEPSLPE 259
P CGV PR T+GE+ E +PE
Sbjct: 599 PICGVTVVRPRMTDGEVLENIMPE 622
>U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform b protein.
Length = 864
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 330 PACGVFASLPRRTEGEMPEPSLPE 259
P CGV PR T+GE+ E +PE
Sbjct: 571 PICGVTVVRPRMTDGEVLENIMPE 594
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 28.7 bits (61), Expect = 4.6
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 260 SGND-GSGISPSVRRGREAKTPHAGSQAVPRERLAEGRAGCSSATPAGFRT 409
SGN GSG +PS + TP A AV + + + SSATP+ T
Sbjct: 2596 SGNGTGSGAAPSSKAASSRPTPAATPLAVATPKPSTPKVEKSSATPSAPET 2646
>AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein.
Length = 796
Score = 28.7 bits (61), Expect = 4.6
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 330 PACGVFASLPRRTEGEMPEPSLPE 259
P CGV PR T+GE+ E +PE
Sbjct: 503 PICGVTVVRPRMTDGEVLENIMPE 526
>Z79694-8|CAB01965.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 267 MTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVH 419
+ A+ + LQ ++ +K Q L +EN L DEL A++ L + +++H
Sbjct: 401 LRAVNAELQKMKHLYEKAVEQKEALARENKKLHDELHEAKEALADANRKLH 451
>Z72506-9|CAA96622.1| 872|Caenorhabditis elegans Hypothetical
protein F07A5.7 protein.
Length = 872
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 267 MTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVH 419
+ A+ + LQ ++ +K Q L +EN L DEL A++ L + +++H
Sbjct: 401 LRAVNAELQKMKHLYEKAVEQKEALARENKKLHDELHEAKEALADANRKLH 451
>X08068-1|CAA30857.1| 882|Caenorhabditis elegans paramyosin
protein.
Length = 882
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +3
Query: 267 MTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVH 419
+ A+ + LQ ++ +K Q L +EN L DEL A++ L + +++H
Sbjct: 417 LRAVNAELQKMKHLYEKAVEQKEALARENKKLHDELHEAKEALADANRKLH 467
>Z81568-10|CAB04600.1| 441|Caenorhabditis elegans Hypothetical
protein K08E3.8 protein.
Length = 441
Score = 27.9 bits (59), Expect = 8.0
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +2
Query: 599 SPTPPMHFAQQVNAGLRDSGPPAQAPQPGSYSTRSQGPV 715
+PT P QQ+ S PP +PGS + S PV
Sbjct: 108 NPTTPQMMQQQMGMNQPMSLPPTHVSRPGSVAPPSSVPV 146
>AL110478-6|CAE17957.2| 952|Caenorhabditis elegans Hypothetical
protein Y26D4A.14 protein.
Length = 952
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = +2
Query: 389 TPAGFRTTRTQLEEENKHLEFMASIRKYDSDINEESD 499
TP+ F+ +R + + EF+ +I Y+ ++N ++
Sbjct: 348 TPSAFKNSREGCDSLKSYTEFINNIANYEKELNNNTE 384
>AC006757-3|AAF60541.2| 916|Caenorhabditis elegans Hypothetical
protein Y40C7B.1 protein.
Length = 916
Score = 27.9 bits (59), Expect = 8.0
Identities = 9/37 (24%), Positives = 21/37 (56%)
Frame = +2
Query: 389 TPAGFRTTRTQLEEENKHLEFMASIRKYDSDINEESD 499
TP+ F+ +R + + EF+ +I Y+ ++N ++
Sbjct: 347 TPSAFKNSREGCDSLKSYTEFINTIANYEKELNNNTE 383
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,660,471
Number of Sequences: 27780
Number of extensions: 295689
Number of successful extensions: 1262
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1254
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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