Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0853
(740 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g08380.1 68417.m01384 proline-rich extensin-like family prote... 31 0.61
At5g43040.1 68418.m05254 DC1 domain-containing protein contains ... 31 1.1
At4g30980.1 68417.m04397 basic helix-loop-helix (bHLH) family pr... 31 1.1
At3g05130.1 68416.m00557 expressed protein ; expression supporte... 31 1.1
At5g43030.1 68418.m05250 DC1 domain-containing protein contains ... 30 1.4
At4g02590.1 68417.m00353 basic helix-loop-helix (bHLH) family pr... 30 1.9
At2g24260.1 68415.m02898 basic helix-loop-helix (bHLH) family pr... 30 1.9
At3g61340.1 68416.m06864 F-box family protein contains F-box dom... 29 2.4
At1g03040.1 68414.m00276 basic helix-loop-helix (bHLH) family pr... 29 2.4
At1g54440.1 68414.m06210 3'-5' exonuclease domain-containing pro... 29 3.2
At4g10760.1 68417.m01756 methyltransferase MT-A70, putative simi... 29 4.3
At3g24255.1 68416.m03045 expressed protein 29 4.3
At3g23910.1 68416.m03004 expressed protein 29 4.3
At2g36300.1 68415.m04455 integral membrane Yip1 family protein c... 29 4.3
At4g31800.1 68417.m04517 WRKY family transcription factor 28 5.7
At3g60530.1 68416.m06770 zinc finger (GATA type) family protein ... 28 5.7
At1g68870.1 68414.m07879 hypothetical protein 28 5.7
At4g21560.3 68417.m03116 vacuolar protein sorting-associated pro... 28 7.5
At4g21560.2 68417.m03115 vacuolar protein sorting-associated pro... 28 7.5
At4g21560.1 68417.m03114 vacuolar protein sorting-associated pro... 28 7.5
At2g25660.1 68415.m03075 expressed protein 28 7.5
At1g09720.1 68414.m01091 kinase interacting family protein simil... 28 7.5
At5g58010.1 68418.m07258 basic helix-loop-helix (bHLH) family pr... 27 9.9
At4g28300.2 68417.m04053 hydroxyproline-rich glycoprotein family... 27 9.9
At4g28300.1 68417.m04052 hydroxyproline-rich glycoprotein family... 27 9.9
At4g14150.1 68417.m02183 phragmoplast-associated kinesin-related... 27 9.9
At3g13000.2 68416.m01620 expressed protein contains Pfam profile... 27 9.9
At3g02990.1 68416.m00294 heat shock factor protein 2 (HSF2) / he... 27 9.9
At2g30500.1 68415.m03715 kinase interacting family protein simil... 27 9.9
At1g06420.1 68414.m00679 expressed protein ; expression supporte... 27 9.9
>At4g08380.1 68417.m01384 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 437
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -1
Query: 524 FSP*PDGYCP--TLRLYRCRIYVWKP*TPNAYSPPPAVY 414
+SP P Y P + +Y+ YV+ P AYSPPP+ Y
Sbjct: 152 YSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPY 190
Score = 31.5 bits (68), Expect = 0.61
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -1
Query: 524 FSP*PDGYCP--TLRLYRCRIYVWKP*TPNAYSPPPAVY 414
+SP P Y P + +Y+ YV+ P AYSPPP+ Y
Sbjct: 207 YSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPY 245
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 527 FFSP*PDGYCP--TLRLYRCRIYVWKP*TPNAYSPPPAVY 414
+ SP P Y P + +Y+ YV+ P AYSPPP+ Y
Sbjct: 64 YSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPY 103
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 527 FFSP*PDGYCP--TLRLYRCRIYVWKP*TPNAYSPPPAVY 414
+ SP P Y P + +Y+ YV+ P AYSPPP+ Y
Sbjct: 88 YSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPY 127
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = -1
Query: 527 FFSP*PDGYCP--TLRLYRCRIYVWKP*TPNAYSPPPAVYA 411
+ SP P Y P + +Y+ YV+ P AYSPPP Y+
Sbjct: 175 YSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPYAYS 215
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 527 FFSP*PDGYCP--TLRLYRCRIYVWKP*TPNAYSPPPAVY 414
+ SP P Y P + +Y+ YV+ P AYSPPP+ Y
Sbjct: 230 YSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPY 269
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 527 FFSP*PDGYCP--TLRLYRCRIYVWKP*TPNAYSPPPAVY 414
+ SP P Y P + +Y+ YV+ P AYSPPP+ Y
Sbjct: 254 YSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPY 293
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 527 FFSP*PDGYCP--TLRLYRCRIYVWKP*TPNAYSPPPAVY 414
+ SP P Y P + +Y+ YV+ P AYSPPP+ Y
Sbjct: 278 YSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPY 317
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 527 FFSP*PDGYCP--TLRLYRCRIYVWKP*TPNAYSPPPAVY 414
+ SP P Y P + +Y+ YV+ P AYSPPP+ Y
Sbjct: 302 YSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPY 341
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 527 FFSP*PDGYCP--TLRLYRCRIYVWKP*TPNAYSPPPAVY 414
+ SP P Y P + +Y+ YV+ P AYSPPP+ Y
Sbjct: 326 YSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPY 365
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -1
Query: 527 FFSP*PDGYCP--TLRLYRCRIYVWKP*TPNAYSPPPAVY 414
+ SP P Y P + +Y+ YV+ P AYSPPP+ Y
Sbjct: 40 YSSPPPYTYSPPPSPYVYKSPPYVYSSPPPYAYSPPPSPY 79
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 527 FFSP*PDGYCP--TLRLYRCRIYVWKP*TPNAYSPPPAVYA 411
+ SP P Y P + +Y+ YV+ P YSPPP Y+
Sbjct: 350 YSSPPPYAYSPPPSPYVYKSPPYVYSSPPPYTYSPPPYAYS 390
>At5g43040.1 68418.m05254 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 551
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Frame = -1
Query: 317 FLLLC-LDGLKV--RCQSRHYLSFPNPRSIASMLFFTREAFSFSCSVLVARPASSCVC 153
++ LC GL V +C + + P +L F + +FSF C A SC+C
Sbjct: 94 YIYLCSFSGLPVCEKCARKPFTIDPGRAHEHPLLVFLKGSFSFPCDACGVNDAKSCLC 151
>At4g30980.1 68417.m04397 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 310
Score = 30.7 bits (66), Expect = 1.1
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +2
Query: 287 PSVRRGR-EAKTPHAGSQAVPRERLAEGRAGCSSATPAGFRTTRTQLEEE 433
P VR R +A PH+ ++ + RER+AE P G +T + + +E
Sbjct: 128 PKVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNKTDKASMLDE 177
>At3g05130.1 68416.m00557 expressed protein ; expression supported
by MPSS
Length = 634
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +3
Query: 282 SHLQSVEAEKQKLRTQVRRLCQENAWLRDEL 374
+ + S+ K +L T++ R CQE LRDEL
Sbjct: 71 NQIDSLVQAKDELETELARYCQEKTGLRDEL 101
>At5g43030.1 68418.m05250 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 564
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Frame = -1
Query: 317 FLLLC-LDGLKV--RCQSRHYLSFPNPRSIASMLFFTREAFSFSCSVLVARPASSCVC 153
++ C GL V +C + ++ P +L F + +FSF C A+SC+C
Sbjct: 89 YMYYCSFSGLPVCKQCVRKPFILDPEKAHEHPLLIFLKGSFSFPCDACGVNDANSCLC 146
>At4g02590.1 68417.m00353 basic helix-loop-helix (bHLH) family
protein similar to A. thaliana putative protein
F6I18.110, GenBank accession number 2980768
Length = 310
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 257 SSGNDGSGISPSVRRGR-EAKTPHAGSQAVPRERLAEGRAGCSSATPAGFRTTRTQLEEE 433
S+ + + I P VR R +A PH+ ++ + RER+AE P +T R + +E
Sbjct: 134 SAPHQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNKTDRAAMIDE 193
>At2g24260.1 68415.m02898 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 350
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/46 (32%), Positives = 25/46 (54%)
Frame = +2
Query: 296 RRGREAKTPHAGSQAVPRERLAEGRAGCSSATPAGFRTTRTQLEEE 433
RRG +A PH+ ++ + RER+AE P G +T + + +E
Sbjct: 141 RRG-QATDPHSIAERLRRERIAERMKALQELVPNGNKTDKASMLDE 185
>At3g61340.1 68416.m06864 F-box family protein contains F-box domain
Pfam:PF00646
Length = 410
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/73 (23%), Positives = 32/73 (43%)
Frame = -1
Query: 326 RAEFLLLCLDGLKVRCQSRHYLSFPNPRSIASMLFFTREAFSFSCSVLVARPASSCVCSA 147
R + L CL C++ + S P+P+ ++ + +F SC + RP +C
Sbjct: 70 RPKILFTCLKD----CET-FFFSSPHPQDLSPIAANLHMSFPISCPSNICRPVRGWLCGL 124
Query: 146 LRASSPAATVRAP 108
+ ++ TV P
Sbjct: 125 HQRTTKGTTVTEP 137
>At1g03040.1 68414.m00276 basic helix-loop-helix (bHLH) family
protein component of the pyruvate dehydrogenase complex
E3, contains PF|00010 helix-loop-helix DNA-binding
domain. ESTs gb|T45640 and gb|T22783 come from this gene
Length = 302
Score = 29.5 bits (63), Expect = 2.4
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +2
Query: 275 SGISPSVRRGR-EAKTPHAGSQAVPRERLAEGRAGCSSATPAGFRTTRTQLEEE 433
S I P VR R +A PH+ ++ + RER+AE P +T R + +E
Sbjct: 138 STIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNKTDRAAMIDE 191
>At1g54440.1 68414.m06210 3'-5' exonuclease domain-containing
protein / helicase and RNase D C-terminal
domain-containing protein / HRDC domain-containing
protein similar to SP|Q01780 Polymyositis/scleroderma
autoantigen 2 {Homo sapiens}; contains Pfam profiles
PF00570: HRDC domain, PF01612: 3'-5' exonuclease
Length = 738
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +1
Query: 523 KKREDPMVELFPDDDHDDNRNNKSDVADAADALRPASE 636
K + D ++ + DDD DD+ + AADAL SE
Sbjct: 644 KSKPDKVIIVVDDDDDDDDDESYEQSTKAADALDRVSE 681
>At4g10760.1 68417.m01756 methyltransferase MT-A70, putative similar
to (N6-adenosine)-methyltransferase [Mus musculus]
GI:10179948, m6A methyltransferase (MT-A70) [Homo
sapiens] GI:2460037; contains Pfam profile PF05063:
MT-A70 (S-adenosylmethionine-binding subunit of human
mRNA:m6A methyl-transferase (MTase))
Length = 685
Score = 28.7 bits (61), Expect = 4.3
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 5/63 (7%)
Frame = -3
Query: 462 MEAMNSKCL-----FSSSSCVRVVRKPAGVAELQPARPSARRSLGTACEPACGVFASLPR 298
+ AM ++CL FS + V+RK +PA +A R LG C P V +L
Sbjct: 122 VRAMVAECLLQRVPFSPTDSSTVLRKLENDQNARPAEKAALRDLGGECGPILAVETALKS 181
Query: 297 RTE 289
E
Sbjct: 182 MAE 184
>At3g24255.1 68416.m03045 expressed protein
Length = 836
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 276 LASHLQSVEAEKQKLRTQVRRLCQENA 356
L + LQSVEAE K+ ++ RL Q +A
Sbjct: 497 LRNELQSVEAESAKVSEEIERLSQSHA 523
>At3g23910.1 68416.m03004 expressed protein
Length = 421
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = +3
Query: 276 LASHLQSVEAEKQKLRTQVRRLCQENA 356
L + LQSVEAE K+ ++ RL Q +A
Sbjct: 82 LRNELQSVEAESAKVSEEIERLSQSHA 108
>At2g36300.1 68415.m04455 integral membrane Yip1 family protein
contains Pfam domain, PF04893: Yip1 domain
Length = 255
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +2
Query: 260 SGNDGSGISPSVRR--GREAKTPHAGSQAVPRERLAEGRAGCSSATPAG 400
SG G + RR + P S A+P G A SSATPAG
Sbjct: 14 SGGSSGGANVQQRRFPATPFQPPRPSSSAIPFMSFDIGSAAASSATPAG 62
>At4g31800.1 68417.m04517 WRKY family transcription factor
Length = 310
Score = 28.3 bits (60), Expect = 5.7
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +3
Query: 240 RSWIGEAQVMTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQ 386
R W+ + + + L L V +E +KL + R+C+ L + L Q
Sbjct: 37 RKWLEQDESASELREELNRVNSENKKLTEMLARVCESYNELHNHLEKLQ 85
>At3g60530.1 68416.m06770 zinc finger (GATA type) family protein
identical to cDNA for GATA transcription factor 4
GI:2959735
Length = 240
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/67 (25%), Positives = 31/67 (46%)
Frame = -1
Query: 263 LSFPNPRSIASMLFFTREAFSFSCSVLVARPASSCVCSALRASSPAATVRAPATISSCVI 84
+S P+ I +L F+ + S S + + ASS S S P++T +P ++
Sbjct: 6 MSSPDLLRIDDLLDFSNDEIFSSSSTVTSSAASSAASSENPFSFPSSTYTSPTLLTDFTH 65
Query: 83 AVILPKD 63
+ +P D
Sbjct: 66 DLCVPSD 72
>At1g68870.1 68414.m07879 hypothetical protein
Length = 147
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Frame = +1
Query: 559 DDDHDDNRNNKSDVADAADALR-PASER--RVTRFRAACASS 675
DDD DD+ NN+SD + +DA P++ + R T+ AA +S
Sbjct: 62 DDDDDDSSNNESDDSMTSDASSWPSTHQPPRSTKNHAAAKNS 103
>At4g21560.3 68417.m03116 vacuolar protein sorting-associated
protein 28 family protein / VPS28 family protein
contains similarity to Swiss-Prot:Q02767 vacuolar
protein sorting-associated protein VPS28 [Saccharomyces
cerevisiae]
Length = 209
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = -1
Query: 212 EAFSFSCSVLVARPASSCVCSAL--RASSPAATVRAPATISSCVIAVILPKDSIFFLSK* 39
E + CS V R +S V + + RA++ A+T + + ++ CV I DS+
Sbjct: 75 ETYKMDCSAAVYRLVTSGVPATVEHRAAASASTSSSASVVAECVQNFITSMDSLKLNMVA 134
Query: 38 LDRSTAILNSL 6
+D+ +L+ L
Sbjct: 135 VDQVYPLLSDL 145
>At4g21560.2 68417.m03115 vacuolar protein sorting-associated
protein 28 family protein / VPS28 family protein
contains similarity to Swiss-Prot:Q02767 vacuolar
protein sorting-associated protein VPS28 [Saccharomyces
cerevisiae]
Length = 209
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = -1
Query: 212 EAFSFSCSVLVARPASSCVCSAL--RASSPAATVRAPATISSCVIAVILPKDSIFFLSK* 39
E + CS V R +S V + + RA++ A+T + + ++ CV I DS+
Sbjct: 75 ETYKMDCSAAVYRLVTSGVPATVEHRAAASASTSSSASVVAECVQNFITSMDSLKLNMVA 134
Query: 38 LDRSTAILNSL 6
+D+ +L+ L
Sbjct: 135 VDQVYPLLSDL 145
>At4g21560.1 68417.m03114 vacuolar protein sorting-associated
protein 28 family protein / VPS28 family protein
contains similarity to Swiss-Prot:Q02767 vacuolar
protein sorting-associated protein VPS28 [Saccharomyces
cerevisiae]
Length = 209
Score = 27.9 bits (59), Expect = 7.5
Identities = 19/71 (26%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = -1
Query: 212 EAFSFSCSVLVARPASSCVCSAL--RASSPAATVRAPATISSCVIAVILPKDSIFFLSK* 39
E + CS V R +S V + + RA++ A+T + + ++ CV I DS+
Sbjct: 75 ETYKMDCSAAVYRLVTSGVPATVEHRAAASASTSSSASVVAECVQNFITSMDSLKLNMVA 134
Query: 38 LDRSTAILNSL 6
+D+ +L+ L
Sbjct: 135 VDQVYPLLSDL 145
>At2g25660.1 68415.m03075 expressed protein
Length = 2146
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +3
Query: 243 SWIGEAQVMTALASHLQSVEAEKQKLRTQVRRLCQENAWLR 365
+W+G T L SHL S E RT+ RR+ +E A +R
Sbjct: 222 TWLGIPLSDTTLPSHLSSEEG--IDFRTKTRRVSREEAGIR 260
>At1g09720.1 68414.m01091 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 928
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = +3
Query: 270 TALASHLQSVEAEKQKLRTQVRRLCQENAWLRDEL 374
TALAS + + +++RT+++ + +A LRDEL
Sbjct: 734 TALASEAKPIYRHLREIRTELQLWLENSAILRDEL 768
>At5g58010.1 68418.m07258 basic helix-loop-helix (bHLH) family
protein bHLH transcription factor GBOF-1, Tulipa
gesneriana, EMBL:AF185269; contains Pfam profile
PF00010: Helix-loop-helix DNA-binding domain
Length = 297
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 287 PSVRRGR-EAKTPHAGSQAVPRERLAEGRAGCSSATPAGFRTTR-TQLEEENKHLEFM 454
P VR R +A PH+ ++ + RER+AE P +T + + L+E +++ F+
Sbjct: 97 PRVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNKTDKASMLDEIIEYVRFL 154
>At4g28300.2 68417.m04053 hydroxyproline-rich glycoprotein family
protein
Length = 438
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 593 PMSPTPPMHFAQQVNAGLRDSGPPAQAPQPGSYSTRSQGP 712
P P PP +A + G R PP Q Q + QGP
Sbjct: 320 PSGPPPPSGYANAMYEGGRMQYPPPQPQQQQQQAHYLQGP 359
>At4g28300.1 68417.m04052 hydroxyproline-rich glycoprotein family
protein
Length = 496
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = +2
Query: 593 PMSPTPPMHFAQQVNAGLRDSGPPAQAPQPGSYSTRSQGP 712
P P PP +A + G R PP Q Q + QGP
Sbjct: 378 PSGPPPPSGYANAMYEGGRMQYPPPQPQQQQQQAHYLQGP 417
>At4g14150.1 68417.m02183 phragmoplast-associated kinesin-related
protein (PAKRP1)
Length = 1292
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +3
Query: 255 EAQVMTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQAS 404
E++ + ALA+ + +++ EK+K R +R EN L+ +L + +QA+
Sbjct: 1133 ESRFINALAAEISALKVEKEKERQYLR---DENKSLQTQLRDTAEAIQAA 1179
>At3g13000.2 68416.m01620 expressed protein contains Pfam profile
PF04784: Protein of unknown function, DUF547
Length = 582
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/42 (33%), Positives = 21/42 (50%)
Frame = +2
Query: 323 HAGSQAVPRERLAEGRAGCSSATPAGFRTTRTQLEEENKHLE 448
H+G + ++EGR C +T R QLEE+ K L+
Sbjct: 19 HSGKKFQGTVTMSEGRETCEESTSGESFPYRFQLEEDVKRLQ 60
>At3g02990.1 68416.m00294 heat shock factor protein 2 (HSF2) / heat
shock transcription factor 2 (HSTF2) identical to heat
shock transcription factor 2 (HSF2) SP:Q96320 from
[Arabidopsis thaliana]; contains Pfam profile: PF00447
HSF-type DNA-binding domain
Length = 468
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 297 VEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRVH 419
+E E ++L+ L QE LR + + HLQ Q+VH
Sbjct: 142 LEEEVERLQRDKNVLMQELVRLRQQQQVTEHHLQNVGQKVH 182
>At2g30500.1 68415.m03715 kinase interacting family protein similar
to kinase interacting protein 1 (GI:13936326) [Petunia
integrifolia]
Length = 517
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/59 (23%), Positives = 33/59 (55%)
Frame = +3
Query: 240 RSWIGEAQVMTALASHLQSVEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQASEQRV 416
RS +GE + L SH++ ++ EK + ++R ++ + +RDE ++ + E+++
Sbjct: 381 RSQLGEQ--LRELESHIRLIKEEKAETEEKLRGGTEKISGMRDESNVLREEIGKREEKI 437
>At1g06420.1 68414.m00679 expressed protein ; expression supported
by MPSS
Length = 221
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 297 VEAEKQKLRTQVRRLCQENAWLRDELAAAQQHLQAS 404
V+ E+ L VR C N W RD++ ++ ++ S
Sbjct: 77 VKLEEHSLSGGVRMHCSVNRWKRDQVCVKKEEIKVS 112
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,949,623
Number of Sequences: 28952
Number of extensions: 276292
Number of successful extensions: 1400
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1172
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1347
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1633819784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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