Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0852
(593 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and ... 52 4e-07
AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA... 52 4e-07
AY058648-1|AAL13877.1| 846|Drosophila melanogaster LD35132p pro... 32 0.51
AE014297-2580|AAF55594.2| 846|Drosophila melanogaster CG7719-PA... 32 0.51
BT010071-1|AAQ22540.1| 1250|Drosophila melanogaster LD11744p pro... 32 0.67
AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA... 32 0.67
L29015-1|AAA28465.1| 667|Drosophila melanogaster dif protein. 28 8.3
BT025231-1|ABF17922.1| 667|Drosophila melanogaster FI01004p pro... 28 8.3
AE014134-2842|AAN10989.1| 667|Drosophila melanogaster CG6794-PB... 28 8.3
AE014134-2841|AAF53608.1| 667|Drosophila melanogaster CG6794-PA... 28 8.3
>U62892-1|AAC47284.1| 3351|Drosophila melanogaster retinoid- and
fatty acid-bindingglycoprotein protein.
Length = 3351
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +2
Query: 8 SLNIKRAIISLLQNEQKPSTQVDVFGICPTEVSTSHEGGQLLCTAA 145
SLNIKRA++SLLQ+ + +VDVFG+CPT STS G + T A
Sbjct: 141 SLNIKRAVVSLLQSGIEAEHEVDVFGMCPTHTSTSKVGNANIITKA 186
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +1
Query: 130 IVHRSRDLSRCSHREQGKSXIIISNVNPNAGVKDMQVLQSTXM*SPRLL 276
I+ ++R+L+ CSHREQ S ++ VN AG+ +LQ+ + R++
Sbjct: 182 IITKARNLNSCSHREQINSGLVSGKVNEKAGITSSLLLQANYIKESRIV 230
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 261 ESKVINGVPEKVAATEEYLYKPFSIGENGARAKVHTKLTLTGKG--KXVAPSSKCTDVNS 434
ES+++N + E V TE Y + + + AKV T L L K +P + T V S
Sbjct: 226 ESRIVNHLIENVQLTETYKFIGNTKRNSDISAKVVTILKLKNPSGTKANSPGTGST-VRS 284
Query: 435 IIFENP 452
+IF+ P
Sbjct: 285 LIFQRP 290
>AE014135-185|AAF59387.2| 3351|Drosophila melanogaster CG11064-PA
protein.
Length = 3351
Score = 52.4 bits (120), Expect = 4e-07
Identities = 25/46 (54%), Positives = 32/46 (69%)
Frame = +2
Query: 8 SLNIKRAIISLLQNEQKPSTQVDVFGICPTEVSTSHEGGQLLCTAA 145
SLNIKRA++SLLQ+ + +VDVFG+CPT STS G + T A
Sbjct: 141 SLNIKRAVVSLLQSGIEAEHEVDVFGMCPTHTSTSKVGNANIITKA 186
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/49 (34%), Positives = 30/49 (61%)
Frame = +1
Query: 130 IVHRSRDLSRCSHREQGKSXIIISNVNPNAGVKDMQVLQSTXM*SPRLL 276
I+ ++R+L+ CSHREQ S ++ VN AG+ +LQ+ + R++
Sbjct: 182 IITKARNLNSCSHREQINSGLVSGKVNEKAGITSSLLLQANYIKESRIV 230
Score = 29.5 bits (63), Expect = 3.6
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 2/66 (3%)
Frame = +3
Query: 261 ESKVINGVPEKVAATEEYLYKPFSIGENGARAKVHTKLTLTGKG--KXVAPSSKCTDVNS 434
ES+++N + E V TE Y + + + AKV T L L K +P + T V S
Sbjct: 226 ESRIVNHLIENVQLTETYKFIGNTKRNSDISAKVVTILKLKNPSGTKANSPGTGST-VRS 284
Query: 435 IIFENP 452
+IF+ P
Sbjct: 285 LIFQRP 290
>AY058648-1|AAL13877.1| 846|Drosophila melanogaster LD35132p
protein.
Length = 846
Score = 32.3 bits (70), Expect = 0.51
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 423 DVNSIIFENPHNGEKVPKNDHACLGAVKELPRALPITSE 539
+V +++F P + +K+P+ D LG +K ALP++ E
Sbjct: 598 NVANVVFSTPVSSQKLPRRDGGLLGKLKATRFALPLSIE 636
>AE014297-2580|AAF55594.2| 846|Drosophila melanogaster CG7719-PA
protein.
Length = 846
Score = 32.3 bits (70), Expect = 0.51
Identities = 13/39 (33%), Positives = 24/39 (61%)
Frame = +3
Query: 423 DVNSIIFENPHNGEKVPKNDHACLGAVKELPRALPITSE 539
+V +++F P + +K+P+ D LG +K ALP++ E
Sbjct: 598 NVANVVFSTPVSSQKLPRRDGGLLGKLKATRFALPLSIE 636
>BT010071-1|AAQ22540.1| 1250|Drosophila melanogaster LD11744p protein.
Length = 1250
Score = 31.9 bits (69), Expect = 0.67
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Frame = +2
Query: 89 CPTEVSTS--HEGGQLLCTAAATCPGAPIENRANPXSSFPTSI 211
C + VST+ HE G + A+TC +E R+ P S P+SI
Sbjct: 1110 CNSIVSTNMEHENGSDIVENASTCSWEAVEERSGPASYAPSSI 1152
>AE014297-1515|AAF54807.1| 2016|Drosophila melanogaster CG6525-PA
protein.
Length = 2016
Score = 31.9 bits (69), Expect = 0.67
Identities = 18/59 (30%), Positives = 27/59 (45%)
Frame = -1
Query: 239 TCISLTPALGLTLEMMXSDLPCSRWEHRDRSRLRCTITVRLRVR*TLQSDKSQTRPPVL 63
TC+ +T A+G +E D C + R R + IT L R T Q ++ + VL
Sbjct: 937 TCVGVTKAMGTDMENKGIDWKCPKCVKRQEERSQPRITDMLVTRPTTQPEQRPSETKVL 995
>L29015-1|AAA28465.1| 667|Drosophila melanogaster dif protein.
Length = 667
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +3
Query: 225 QGYASPSVDANVESKVINGVPEKVAATEEYLYKPFSIGENGARAKVHTKLTLTGKGKXVA 404
Q PSV+ N S P +T + + P +G+N + T G +
Sbjct: 446 QSSQCPSVERNFAS------PRSNCSTVDSI-PPMQMGQNQTHLYLPDATNFTFNGNFAS 498
Query: 405 PSSKCTDVNSI 437
PSS C+ V+SI
Sbjct: 499 PSSNCSTVDSI 509
>BT025231-1|ABF17922.1| 667|Drosophila melanogaster FI01004p
protein.
Length = 667
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +3
Query: 225 QGYASPSVDANVESKVINGVPEKVAATEEYLYKPFSIGENGARAKVHTKLTLTGKGKXVA 404
Q PSV+ N S P +T + + P +G+N + T G +
Sbjct: 446 QSSQCPSVERNFAS------PRSNCSTVDSI-PPMQMGQNQTHLYLPDATNFTFNGNFAS 498
Query: 405 PSSKCTDVNSI 437
PSS C+ V+SI
Sbjct: 499 PSSNCSTVDSI 509
>AE014134-2842|AAN10989.1| 667|Drosophila melanogaster CG6794-PB,
isoform B protein.
Length = 667
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +3
Query: 225 QGYASPSVDANVESKVINGVPEKVAATEEYLYKPFSIGENGARAKVHTKLTLTGKGKXVA 404
Q PSV+ N S P +T + + P +G+N + T G +
Sbjct: 446 QSSQCPSVERNFAS------PRSNCSTVDSI-PPMQMGQNQTHLYLPDATNFTFNGNFAS 498
Query: 405 PSSKCTDVNSI 437
PSS C+ V+SI
Sbjct: 499 PSSNCSTVDSI 509
>AE014134-2841|AAF53608.1| 667|Drosophila melanogaster CG6794-PA,
isoform A protein.
Length = 667
Score = 28.3 bits (60), Expect = 8.3
Identities = 20/71 (28%), Positives = 30/71 (42%)
Frame = +3
Query: 225 QGYASPSVDANVESKVINGVPEKVAATEEYLYKPFSIGENGARAKVHTKLTLTGKGKXVA 404
Q PSV+ N S P +T + + P +G+N + T G +
Sbjct: 446 QSSQCPSVERNFAS------PRSNCSTVDSI-PPMQMGQNQTHLYLPDATNFTFNGNFAS 498
Query: 405 PSSKCTDVNSI 437
PSS C+ V+SI
Sbjct: 499 PSSNCSTVDSI 509
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,435,475
Number of Sequences: 53049
Number of extensions: 575513
Number of successful extensions: 1734
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1734
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2400202284
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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