Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0852
         (593 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81449-9|CAB03760.3|  700|Caenorhabditis elegans Hypothetical pr...    30   1.1  
Z81449-8|CAI70399.1|  705|Caenorhabditis elegans Hypothetical pr...    30   1.1  
X64415-2|CAA45761.1|  700|Caenorhabditis elegans unc-93 protein.       30   1.1  
X64415-1|CAA45760.1|  705|Caenorhabditis elegans unc-93 protein.       30   1.1  
AF068713-4|AAC17795.2|  398|Caenorhabditis elegans Hypothetical ...    30   1.4  
AF026210-3|AAB71286.3|  382|Caenorhabditis elegans Hypothetical ...    29   3.3  
Z66561-4|CAA91457.2|  185|Caenorhabditis elegans Hypothetical pr...    28   5.8  
M98552-5|AAA28207.1|  401|Caenorhabditis elegans Hypothetical pr...    28   5.8  

>Z81449-9|CAB03760.3|  700|Caenorhabditis elegans Hypothetical
           protein C46F11.1b protein.
          Length = 700

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 441 FENPHNGEKVPKNDHAC--LGAVKELPRALPITSEQTQHRVFAQFSQNLA 584
           FE P    +VP+ DH C   G+ + LPR   +T +   H V  + +++LA
Sbjct: 157 FELPTETGRVPEYDHFCPIHGSRRRLPRNKLVTMQTLMHSVDDEDNEDLA 206


>Z81449-8|CAI70399.1|  705|Caenorhabditis elegans Hypothetical
           protein C46F11.1a protein.
          Length = 705

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 441 FENPHNGEKVPKNDHAC--LGAVKELPRALPITSEQTQHRVFAQFSQNLA 584
           FE P    +VP+ DH C   G+ + LPR   +T +   H V  + +++LA
Sbjct: 162 FELPTETGRVPEYDHFCPIHGSRRRLPRNKLVTMQTLMHSVDDEDNEDLA 211


>X64415-2|CAA45761.1|  700|Caenorhabditis elegans unc-93 protein.
          Length = 700

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 441 FENPHNGEKVPKNDHAC--LGAVKELPRALPITSEQTQHRVFAQFSQNLA 584
           FE P    +VP+ DH C   G+ + LPR   +T +   H V  + +++LA
Sbjct: 157 FELPTETGRVPEYDHFCPIHGSRRRLPRNKLVTMQTLMHSVDDEDNEDLA 206


>X64415-1|CAA45760.1|  705|Caenorhabditis elegans unc-93 protein.
          Length = 705

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
 Frame = +3

Query: 441 FENPHNGEKVPKNDHAC--LGAVKELPRALPITSEQTQHRVFAQFSQNLA 584
           FE P    +VP+ DH C   G+ + LPR   +T +   H V  + +++LA
Sbjct: 162 FELPTETGRVPEYDHFCPIHGSRRRLPRNKLVTMQTLMHSVDDEDNEDLA 211


>AF068713-4|AAC17795.2|  398|Caenorhabditis elegans Hypothetical
           protein T24A6.8 protein.
          Length = 398

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 233 CKSFSRRXCRVQGY*RCTREGGCH 304
           CK+F RR C ++G  +C+  G C+
Sbjct: 54  CKTFFRRMCLLRGEIKCSTSGDCY 77


>AF026210-3|AAB71286.3|  382|Caenorhabditis elegans Hypothetical
           protein F48A11.4 protein.
          Length = 382

 Score = 28.7 bits (61), Expect = 3.3
 Identities = 13/42 (30%), Positives = 21/42 (50%)
 Frame = +1

Query: 103 VYLTRRRTVIVHRSRDLSRCSHREQGKSXIIISNVNPNAGVK 228
           +Y+    +  V +S D+    H E G S  +I   NPNA ++
Sbjct: 245 IYVQINNSEAVVKSLDVMEAVHNENGVSEYLIEMANPNARMR 286


>Z66561-4|CAA91457.2|  185|Caenorhabditis elegans Hypothetical
           protein F08G12.5 protein.
          Length = 185

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -3

Query: 114 CEVDTSVGQ-IPNTSTCVDGFCSFCSNEMMALLMFNDWR 1
           C V  ++ Q IP T TC   FC  C  E+    + ND R
Sbjct: 40  CAVCLNIFQGIPQTLTCGHSFCHRCIEEVAHSEVMNDTR 78


>M98552-5|AAA28207.1|  401|Caenorhabditis elegans Hypothetical
           protein ZK370.5 protein.
          Length = 401

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +3

Query: 216 CRRQGYASPSVDANVESKVINGVPEKVAATEEYLY-KPFSIGENGARAKV 362
           C R    SPS+   + + V  G P  + A   +LY   F + +N  RA V
Sbjct: 208 CDRYYLTSPSMKLEMHNAVEKGKPISIVAVPSHLYHMMFELFKNAMRATV 257


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,305,527
Number of Sequences: 27780
Number of extensions: 279097
Number of successful extensions: 857
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 817
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1258229602
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)