Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0850
(629 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496... 184 3e-47
At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494 A... 184 4e-47
At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497... 184 4e-47
At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to S... 182 1e-46
At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493 A... 182 2e-46
At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671 A... 182 2e-46
At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292 A... 180 7e-46
At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292 A... 180 7e-46
At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293 A... 180 7e-46
At2g42100.1 68415.m05205 actin, putative very strong similarity ... 162 2e-40
At2g42170.1 68415.m05219 actin, putative similar to actin 2 [Ara... 155 3e-38
At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Ac... 154 5e-38
At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly i... 97 6e-21
At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identica... 93 1e-19
At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary id... 83 1e-16
At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identica... 67 8e-12
At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly i... 52 2e-07
At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identica... 52 3e-07
At3g12380.1 68416.m01543 actin/actin-like family protein similar... 44 6e-05
At5g01040.1 68418.m00007 laccase family protein / diphenol oxida... 36 0.029
At5g56180.2 68418.m07009 actin-related protein, putative (ARP8) ... 29 1.9
At5g56180.1 68418.m07008 actin-related protein, putative (ARP8) ... 29 1.9
At1g16690.2 68414.m01999 transcription factor-related similar to... 29 2.5
At1g16690.1 68414.m01998 transcription factor-related similar to... 29 2.5
At1g71850.1 68414.m08303 expressed protein ; expression supporte... 29 3.4
At3g58650.1 68416.m06537 expressed protein 28 4.4
At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein... 28 5.9
At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase, put... 28 5.9
At1g14380.1 68414.m01704 calmodulin-binding family protein conta... 28 5.9
At5g06610.1 68418.m00747 expressed protein contains Pfam profile... 27 7.8
At3g45240.1 68416.m04882 protein kinase family protein contains ... 27 7.8
>At3g12110.1 68416.m01507 actin 11 (ACT11) identical to SP|P53496
Actin 11 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (449), Expect = 3e-47
Identities = 82/87 (94%), Positives = 85/87 (97%)
Frame = +2
Query: 248 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 427
G +D+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 428 APLNPKANREKMTQIXFETFNTPAMYV 508
APLNPKANREKMTQI FETFNTPAMYV
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYV 136
Score = 88.2 bits (209), Expect = 4e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 54.8 bits (126), Expect = 4e-08
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = +1
Query: 511 IQAVLSLYASGRTTGIVLDSGDGVXHNRAHXTXDYALP 624
IQAVLSLYASGRTTGIVLDSGDGV H YALP
Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALP 174
>At5g59370.1 68418.m07440 actin 4 (ACT4) identical to SP|P53494
Actin 4 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 4e-47
Identities = 82/87 (94%), Positives = 84/87 (96%)
Frame = +2
Query: 248 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 427
G +D+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 428 APLNPKANREKMTQIXFETFNTPAMYV 508
APLNPKANREKMTQI FETFNTPAMYV
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYV 136
Score = 88.2 bits (209), Expect = 4e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 54.8 bits (126), Expect = 4e-08
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = +1
Query: 511 IQAVLSLYASGRTTGIVLDSGDGVXHNRAHXTXDYALP 624
IQAVLSLYASGRTTGIVLDSGDGV H YALP
Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALP 174
>At3g46520.1 68416.m05050 actin 12 (ACT12) identical to SP|P53497
Actin 12 {Arabidopsis thaliana}
Length = 377
Score = 184 bits (448), Expect = 4e-47
Identities = 82/87 (94%), Positives = 84/87 (96%)
Frame = +2
Query: 248 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 427
G +D+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 428 APLNPKANREKMTQIXFETFNTPAMYV 508
APLNPKANREKMTQI FETFNTPAMYV
Sbjct: 110 APLNPKANREKMTQIMFETFNTPAMYV 136
Score = 88.2 bits (209), Expect = 4e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 54.8 bits (126), Expect = 4e-08
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = +1
Query: 511 IQAVLSLYASGRTTGIVLDSGDGVXHNRAHXTXDYALP 624
IQAVLSLYASGRTTGIVLDSGDGV H YALP
Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALP 174
>At5g09810.1 68418.m01135 actin 7 (ACT7) / actin 2 identical to
SP|P53492 Actin 7 (Actin-2) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (444), Expect = 1e-46
Identities = 81/87 (93%), Positives = 84/87 (96%)
Frame = +2
Query: 248 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 427
G +D+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 109
Query: 428 APLNPKANREKMTQIXFETFNTPAMYV 508
APLNPKANREKMTQI FETFN PAMYV
Sbjct: 110 APLNPKANREKMTQIMFETFNVPAMYV 136
Score = 88.2 bits (209), Expect = 4e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 54.8 bits (126), Expect = 4e-08
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = +1
Query: 511 IQAVLSLYASGRTTGIVLDSGDGVXHNRAHXTXDYALP 624
IQAVLSLYASGRTTGIVLDSGDGV H YALP
Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALP 174
>At3g53750.1 68416.m05938 actin 3 (ACT3) identical to SP|P53493
Actin 3 {Arabidopsis thaliana}; supported by full-length
cDNA: Ceres: 19581.
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 80/87 (91%), Positives = 83/87 (95%)
Frame = +2
Query: 248 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 427
G +D+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 428 APLNPKANREKMTQIXFETFNTPAMYV 508
APLNPKANREKMTQI FETFN PAMYV
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYV 136
Score = 88.2 bits (209), Expect = 4e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 54.8 bits (126), Expect = 4e-08
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = +1
Query: 511 IQAVLSLYASGRTTGIVLDSGDGVXHNRAHXTXDYALP 624
IQAVLSLYASGRTTGIVLDSGDGV H YALP
Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALP 174
>At2g37620.1 68415.m04615 actin 1 (ACT1) identical to SP|P10671
Actin 1 (Actin 3) {Arabidopsis thaliana}
Length = 377
Score = 182 bits (442), Expect = 2e-46
Identities = 80/87 (91%), Positives = 83/87 (95%)
Frame = +2
Query: 248 GTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 427
G +D+YVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP+LLTE
Sbjct: 50 GQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTE 109
Query: 428 APLNPKANREKMTQIXFETFNTPAMYV 508
APLNPKANREKMTQI FETFN PAMYV
Sbjct: 110 APLNPKANREKMTQIMFETFNAPAMYV 136
Score = 88.2 bits (209), Expect = 4e-18
Identities = 39/48 (81%), Positives = 43/48 (89%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
E++ LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQ+
Sbjct: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQK 52
Score = 54.8 bits (126), Expect = 4e-08
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = +1
Query: 511 IQAVLSLYASGRTTGIVLDSGDGVXHNRAHXTXDYALP 624
IQAVLSLYASGRTTGIVLDSGDGV H YALP
Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSHT-VPIYEGYALP 174
>At3g18780.2 68416.m02386 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 377
Score = 180 bits (438), Expect = 7e-46
Identities = 78/85 (91%), Positives = 84/85 (98%)
Frame = +2
Query: 254 EDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 433
+D+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAP
Sbjct: 52 KDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAP 111
Query: 434 LNPKANREKMTQIXFETFNTPAMYV 508
LNPKANREKMTQI FETFN+PAMYV
Sbjct: 112 LNPKANREKMTQIMFETFNSPAMYV 136
Score = 83.8 bits (198), Expect = 8e-17
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM Q+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 511 IQAVLSLYASGRTTGIVLDSGDGVXH 588
IQAVLSLYASGRTTGIVLDSGDGV H
Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSH 163
>At3g18780.1 68416.m02385 actin 2 (ACT2) identical to SP|Q96292
Actin 2 {Arabidopsis thaliana}; nearly identical to
SP|Q96293 Actin 8 [Arabidopsis thaliana] GI:1669387 and
to At1g49240
Length = 371
Score = 180 bits (438), Expect = 7e-46
Identities = 78/85 (91%), Positives = 84/85 (98%)
Frame = +2
Query: 254 EDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 433
+D+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAP
Sbjct: 52 KDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAP 111
Query: 434 LNPKANREKMTQIXFETFNTPAMYV 508
LNPKANREKMTQI FETFN+PAMYV
Sbjct: 112 LNPKANREKMTQIMFETFNSPAMYV 136
Score = 83.8 bits (198), Expect = 8e-17
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM Q+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 511 IQAVLSLYASGRTTGIVLDSGDGVXH 588
IQAVLSLYASGRTTGIVLDSGDGV H
Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSH 163
>At1g49240.1 68414.m05520 actin 8 (ACT8) identical to SP|Q96293
Actin 8 {Arabidopsis thaliana}; nearly identical to
SP|Q96292 Actin 2 [Arabidopsis thaliana] GI:1669387, and
to At3g18780
Length = 377
Score = 180 bits (438), Expect = 7e-46
Identities = 78/85 (91%), Positives = 84/85 (98%)
Frame = +2
Query: 254 EDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 433
+D+YVGDEAQSKRGILTLKYPIEHG+V+NWDDMEKIWHHTFYNELR+APEEHPVLLTEAP
Sbjct: 52 KDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAP 111
Query: 434 LNPKANREKMTQIXFETFNTPAMYV 508
LNPKANREKMTQI FETFN+PAMYV
Sbjct: 112 LNPKANREKMTQIMFETFNSPAMYV 136
Score = 83.8 bits (198), Expect = 8e-17
Identities = 35/48 (72%), Positives = 42/48 (87%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
+++ +V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH GVMVGM Q+
Sbjct: 5 DDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQK 52
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +1
Query: 511 IQAVLSLYASGRTTGIVLDSGDGVXH 588
IQAVLSLYASGRTTGIVLDSGDGV H
Sbjct: 138 IQAVLSLYASGRTTGIVLDSGDGVSH 163
>At2g42100.1 68415.m05205 actin, putative very strong similarity to
SP|P53496 Actin 11 {Arabidopsis thaliana}, SP|P53493
Actin 3 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 378
Score = 162 bits (393), Expect = 2e-40
Identities = 67/85 (78%), Positives = 80/85 (94%)
Frame = +2
Query: 254 EDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 433
+D++VGDEAQ++RGIL+LKYPIEHG+V+NWDDMEKIWHHTFYNELR+ PEEHP+LLTEAP
Sbjct: 53 KDTFVGDEAQARRGILSLKYPIEHGVVSNWDDMEKIWHHTFYNELRLEPEEHPILLTEAP 112
Query: 434 LNPKANREKMTQIXFETFNTPAMYV 508
LNPK NREKMTQI FE+F P+MY+
Sbjct: 113 LNPKVNREKMTQIMFESFAFPSMYI 137
Score = 84.2 bits (199), Expect = 6e-17
Identities = 36/48 (75%), Positives = 43/48 (89%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQR 257
+E A+V DNG+GM KAGFAGDDAPRAVFPS+VGRPRH+GVMVGM ++
Sbjct: 6 DESVAIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHRGVMVGMDEK 53
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/38 (73%), Positives = 29/38 (76%)
Frame = +1
Query: 511 IQAVLSLYASGRTTGIVLDSGDGVXHNRAHXTXDYALP 624
IQAVLSLY+SGRTTGIVLDSGDGV H YALP
Sbjct: 139 IQAVLSLYSSGRTTGIVLDSGDGVSHT-VPIYEGYALP 175
>At2g42170.1 68415.m05219 actin, putative similar to actin 2
[Arabidopsis thaliana] gi|9293903|dbj|BAB01806
Length = 329
Score = 155 bits (375), Expect = 3e-38
Identities = 65/84 (77%), Positives = 78/84 (92%)
Frame = +2
Query: 257 DSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPL 436
D +VGD+A+++ GILTL YP+EHG+V+NWDDMEKIW+HTFY+ELRVAPEEHPVLLTEAPL
Sbjct: 8 DLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPL 67
Query: 437 NPKANREKMTQIXFETFNTPAMYV 508
NPKA+REKMTQI FETF P+MY+
Sbjct: 68 NPKADREKMTQIMFETFAVPSMYI 91
Score = 44.0 bits (99), Expect = 8e-05
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +1
Query: 511 IQAVLSLYASGRTTGIVLDSGDGVXH 588
+QA LSL+ASGRTTG VLDSGDGV +
Sbjct: 93 MQAALSLHASGRTTGTVLDSGDGVSY 118
>At2g42090.1 68415.m05204 actin, putative similar to SP|P53496 Actin
11 {Arabidopsis thaliana}; contains Pfam profile
PF00022: Actin
Length = 366
Score = 154 bits (373), Expect = 5e-38
Identities = 70/92 (76%), Positives = 77/92 (83%)
Frame = +2
Query: 233 RDGRYGTEDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 412
RDG +SYVG+E + R ILTLK P+EHGIV NWDDMEKIWH+TFYNELRV PEEHP
Sbjct: 35 RDG-LNPNESYVGEEGHANRDILTLKDPMEHGIVNNWDDMEKIWHYTFYNELRVDPEEHP 93
Query: 413 VLLTEAPLNPKANREKMTQIXFETFNTPAMYV 508
VLLTEAP NPKANREKMTQI FE+F+ PAMYV
Sbjct: 94 VLLTEAPYNPKANREKMTQIMFESFDVPAMYV 125
Score = 52.4 bits (120), Expect = 2e-07
Identities = 21/32 (65%), Positives = 26/32 (81%)
Frame = +3
Query: 129 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPR 224
+V D G GM +AGFAGD+AP+ VFP +VGRPR
Sbjct: 4 IVCDKGHGMVQAGFAGDEAPKVVFPCVVGRPR 35
Score = 41.1 bits (92), Expect = 6e-04
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +1
Query: 511 IQAVLSLYASGRTTGIVLDSGDGVXHNRAHXTXDYALP 624
+Q+VL LY+SGRTTG+VLD G+ V H YALP
Sbjct: 127 MQSVLYLYSSGRTTGVVLDLGERVSHT-VPVYEGYALP 163
>At3g27000.1 68416.m03378 actin-related protein 2 (ARP2) nearly
identical to actin-related protein 2 (ARP2) [Arabidopsis
thaliana] GI:3818624; contains Pfam profile PF00022:
Actin
Length = 389
Score = 97.5 bits (232), Expect = 6e-21
Identities = 39/85 (45%), Positives = 55/85 (64%)
Frame = +2
Query: 254 EDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 433
+D VG+ R L + YP+ +GIV NWDDME +W H FYNEL++ P + +LLT+ P
Sbjct: 51 KDIVVGETCSELRHQLDINYPVHNGIVQNWDDMEHVWDHAFYNELKINPSDCKILLTDPP 110
Query: 434 LNPKANREKMTQIXFETFNTPAMYV 508
LNP NREKM + FE +N +++
Sbjct: 111 LNPSKNREKMIETMFEKYNFAGVFI 135
Score = 45.6 bits (103), Expect = 3e-05
Identities = 18/31 (58%), Positives = 24/31 (77%)
Frame = +3
Query: 129 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 221
+V DNG+G K GFAG++ P +VFP +VGRP
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRP 37
Score = 43.6 bits (98), Expect = 1e-04
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +1
Query: 511 IQAVLSLYASGRTTGIVLDSGDGVXH 588
IQAVL+LYA G TG+V+DSGDGV H
Sbjct: 137 IQAVLTLYAQGLLTGLVIDSGDGVTH 162
>At1g13180.1 68414.m01528 actin-related protein 3 (ARP3) identical
to actin-related protein 3 (ARP3) [Arabidopsis thaliana]
GI:21427461; contains Pfam profile PF00022: Actin
Length = 427
Score = 93.5 bits (222), Expect = 1e-19
Identities = 45/87 (51%), Positives = 56/87 (64%), Gaps = 3/87 (3%)
Frame = +2
Query: 257 DSYVGDEAQSK-RGILT--LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTE 427
D Y+GDEA +K R T L YPIEHG V +WD ME+ W +N LR PE+H LLTE
Sbjct: 67 DFYIGDEALAKSRSSSTHNLHYPIEHGQVEDWDAMERYWQQCIFNYLRCDPEDHYFLLTE 126
Query: 428 APLNPKANREKMTQIXFETFNTPAMYV 508
+PL P +RE +I FETFN P +Y+
Sbjct: 127 SPLTPPESREYTGEILFETFNVPGLYI 153
Score = 35.9 bits (79), Expect = 0.022
Identities = 14/29 (48%), Positives = 21/29 (72%)
Frame = +3
Query: 126 ALVVDNGSGMCKAGFAGDDAPRAVFPSIV 212
A+V+DNG+G K GFAG+ P + P++V
Sbjct: 8 AIVIDNGTGYTKMGFAGNVEPCFILPTVV 36
>At1g18450.1 68414.m02302 actin-related protein 4 (ARP4) neary
identical to actin-related protein 4 (ARP4) [Arabidopsis
thaliana] GI:21427463; contains Pfam profile PF00022:
Actin; supporting cDNA gi|21427462|gb|AF507912.1|
Length = 441
Score = 83.0 bits (196), Expect = 1e-16
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Frame = +2
Query: 263 YVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLN 439
YVG +A S +R + + PI+ GIV++WD ++ IW H F + L + P EHP+LL E PLN
Sbjct: 76 YVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEHPMLLAEPPLN 135
Query: 440 PKANREKMTQIXFETFNTPAMYVPSKP 520
+ REK ++ FE + PA+++ P
Sbjct: 136 TQQQREKAAELMFEKYKVPALFMAKNP 162
Score = 56.8 bits (131), Expect = 1e-08
Identities = 23/34 (67%), Positives = 31/34 (91%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 215
+EV+A+VVD GS CKAG+AG+DAP+AVFPS++G
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIG 38
>At1g73910.1 68414.m08559 actin-related protein 5 (ARP5) identical
to actin-related protein 5 (ARP5) GI:21489922 from
[Arabidopsis thaliana]
Length = 145
Score = 67.3 bits (157), Expect = 8e-12
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +2
Query: 236 DGRYGTEDSYVGDEAQS-KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHP 412
D G Y G +A + +R + + P + GIVT+WD ++ +W H F N L + P EHP
Sbjct: 61 DKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHP 120
Query: 413 VLLTEAPLNPKANREK 460
+LL E PLN + REK
Sbjct: 121 MLLAEPPLNSQQQREK 136
Score = 57.2 bits (132), Expect = 8e-09
Identities = 24/34 (70%), Positives = 31/34 (91%)
Frame = +3
Query: 114 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVG 215
+EV+A+VVD GS CKAG+AG+DAP+AVFPS+VG
Sbjct: 5 DEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVG 38
>At3g33520.1 68416.m04291 actin-related protein 6 (ARP6) nearly
identical to actin-related protein 6 (ARP6) [Arabidopsis
thaliana] GI:21427467; contains Pfam profile PF00022:
Actin
Length = 421
Score = 52.4 bits (120), Expect = 2e-07
Identities = 23/68 (33%), Positives = 39/68 (57%)
Frame = +2
Query: 305 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIXFET 484
++ PI+ G + N D +IW H F + L +AP +LLTEAPL+ + + ++ FE
Sbjct: 61 VRRPIDRGYLINSDLQREIWSHLFTSLLHIAPSSSSLLLTEAPLSIPSVQRTTDELVFED 120
Query: 485 FNTPAMYV 508
F ++Y+
Sbjct: 121 FGFSSLYI 128
Score = 32.7 bits (71), Expect = 0.21
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 129 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP 221
+V+DNG G+ KAG G+ P V P+ + +P
Sbjct: 5 VVLDNGGGLIKAGQGGERDPTTVIPNCLYKP 35
>At3g60830.1 68416.m06805 actin-related protein 7 (ARP7) identical
to actin-related protein 7 (ARP7) [Arabidopsis thaliana]
GI:21427469; contains Pfam profile PF00022: Actin
Length = 363
Score = 52.0 bits (119), Expect = 3e-07
Identities = 25/65 (38%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +2
Query: 314 PIEHGIVTNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIXFETFN 490
PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+ FETFN
Sbjct: 57 PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFN 116
Query: 491 TPAMY 505
Y
Sbjct: 117 VSGFY 121
Score = 30.7 bits (66), Expect = 0.83
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +1
Query: 514 QAVLSLYASGRTTGIVLDSGDG 579
QAVLSLYA GR +G +D G G
Sbjct: 125 QAVLSLYAVGRISGCTVDIGHG 146
Score = 27.5 bits (58), Expect = 7.8
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = +3
Query: 126 ALVVDNGSGMCKAGFA-GDDAPRAVFPSIVGR 218
ALVVD GS KAG A D +P + PS + R
Sbjct: 3 ALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR 34
>At3g12380.1 68416.m01543 actin/actin-like family protein similar to
SP|P53946 Actin-like protein ARP5 {Saccharomyces
cerevisiae}; contains Pfam profile PF00022: Actin
Length = 724
Score = 44.4 bits (100), Expect = 6e-05
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +2
Query: 314 PIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIXFETFN 490
P + +V ++ ME I + F + +HP+L+TE NP +R KM ++ FET+
Sbjct: 85 PFDSNVVYQFEIMEYILDYAFDRLGANGSGIDHPILITECACNPVQSRSKMAELLFETYG 144
Query: 491 TPAM 502
PA+
Sbjct: 145 VPAV 148
Score = 42.7 bits (96), Expect = 2e-04
Identities = 17/34 (50%), Positives = 25/34 (73%)
Frame = +3
Query: 129 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 230
+V+DNG+ + G+AG+ PR VF +IV RPRH+
Sbjct: 22 IVIDNGASYFRIGWAGETEPRVVFRNIVQRPRHK 55
>At5g01040.1 68418.m00007 laccase family protein / diphenol oxidase
family protein similar to laccase [Pinus
taeda][GI:13661201], lac110 laccase, Populus
trichocarpa, EMBL:PTY13773
Length = 584
Score = 35.5 bits (78), Expect = 0.029
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Frame = -2
Query: 364 PNLLHVIPVSDDSVFDGVFEGQDT--SFALCLISYIRVL-CPIPTITP*WRGLPTIEGNT 194
P L V+ ++ D + + + + YI + P P I P RGL +G T
Sbjct: 249 PYLTDVMILTPGQTVDALLTADQAIGKYYMATLPYISAIGIPTPDIKP-TRGLIVYQGAT 307
Query: 193 ARGASSPAKPALHIPEPLSTTNAATSS 113
+ +SSPA+P + +P +ST + TS+
Sbjct: 308 S--SSSPAEPLMPVPNDMSTAHRFTSN 332
>At5g56180.2 68418.m07009 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 387
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 514 QAVLSLYASGRTTGIVLDSG 573
QAVL+LYA+ RT+GIV++ G
Sbjct: 239 QAVLALYAARRTSGIVVNIG 258
>At5g56180.1 68418.m07008 actin-related protein, putative (ARP8)
strong similarity to actin-related protein 8A (ARP8)
[Arabidopsis thaliana] GI:21427473; contains Pfam
profile PF00022: Actin; supporting cDNA
gi|21427470|gb|AF507916.1|
Length = 471
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/20 (65%), Positives = 18/20 (90%)
Frame = +1
Query: 514 QAVLSLYASGRTTGIVLDSG 573
QAVL+LYA+ RT+GIV++ G
Sbjct: 239 QAVLALYAARRTSGIVVNIG 258
>At1g16690.2 68414.m01999 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 272 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 451
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 452 REK 460
REK
Sbjct: 225 REK 227
>At1g16690.1 68414.m01998 transcription factor-related similar to
enhancer of polycomb (GI:11907923)[Homo sapiens]
Length = 439
Score = 29.1 bits (62), Expect = 2.5
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = +2
Query: 272 DEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKAN 451
D A L++KY + H I + W + +IW L+ P PV T P N
Sbjct: 169 DAAGEALKYLSIKYGVFHAIYSYWKNKREIWQKPILRRLQPPP---PVNDTN-PYNVFRP 224
Query: 452 REK 460
REK
Sbjct: 225 REK 227
>At1g71850.1 68414.m08303 expressed protein ; expression supported
by MPSS
Length = 470
Score = 28.7 bits (61), Expect = 3.4
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +2
Query: 203 LDRGKAPPSGRDGRYGTEDSYVGDEAQSKRGILTLK 310
L+RG+ S R GR +S D+AQS+R ++LK
Sbjct: 426 LERGRRNSSPRSGRRSFGNSGSRDKAQSRRSKISLK 461
>At3g58650.1 68416.m06537 expressed protein
Length = 723
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = +2
Query: 197 VPLDRGKAPPSGRDGRYGTEDSYVGDEAQSKRGILTLK--YPIEHGIVTNWDDMEK 358
+PL R K+ P + R G ++S + ++ + KRG ++K I+ T+ DD ++
Sbjct: 308 LPLSRKKSLPRSKKPRNGVQESGIYEDKRIKRGEKSIKCNISIDGDSSTSKDDQKR 363
>At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein
contains PF01422: NF-X1 type zinc finger
Length = 912
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +2
Query: 440 PKANREKMTQIXFETFNTPAMYVPSKPCSRCTRPVVPP 553
P NRE + + + + A P PC RC PV P
Sbjct: 536 PPPNREFILKPTKKMLHIQAESTPGSPCPRCPEPVWRP 573
>At3g19480.1 68416.m02469 D-3-phosphoglycerate dehydrogenase,
putative / 3-PGDH, putative similar to SP:O04130 from
[Arabidopsis thaliana]
Length = 588
Score = 27.9 bits (59), Expect = 5.9
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = -3
Query: 360 IFSMSSQLVTIPCSMGYLRVRIPLLLCASS 271
IFS SS+LVT P S+ +R R ++L SS
Sbjct: 10 IFSSSSRLVTTPSSVFPIRQRRRIILVTSS 39
>At1g14380.1 68414.m01704 calmodulin-binding family protein contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 664
Score = 27.9 bits (59), Expect = 5.9
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +1
Query: 436 QPQGQQREDDPDXVRNIQHARHVRPIQAVLSLYASGRTTGIVLDSGDG 579
QP+G+ E+ + NI+ A + + + + G+ +G VL+ G+G
Sbjct: 374 QPEGKVSENVLEGGDNIEFAEKEKDTTDSVQIESEGKVSGNVLEGGEG 421
>At5g06610.1 68418.m00747 expressed protein contains Pfam profile
PF04788: Protein of unknown function (DUF620)
Length = 368
Score = 27.5 bits (58), Expect = 7.8
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 226 WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSSHI 104
WR P + + A+GA P + AL +PL+ ++ +S+ +
Sbjct: 167 WRYTPWLGDHAAKGAIRPLRRALQGLDPLTISSVFSSAQFV 207
>At3g45240.1 68416.m04882 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 396
Score = 27.5 bits (58), Expect = 7.8
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 206 DRGKAPPSGRDGRYGTEDSYVGDEAQSKRGILTLKYPIEHGIV 334
D G+ G D G E+ V + ++SKR LK +++G+V
Sbjct: 39 DSGETSNPGGDDEEGEEEEEVEELSRSKRSEEILKCKLQNGLV 81
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,053,022
Number of Sequences: 28952
Number of extensions: 348578
Number of successful extensions: 1018
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 950
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1285411824
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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