Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0849
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0394 - 23084485-23084577,23084677-23084802,23085134-230852... 70 1e-12
06_01_0539 + 3869156-3869908 49 3e-06
06_01_0529 + 3831100-3831852 49 3e-06
06_01_0479 + 3419657-3420337 49 3e-06
09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341 45 5e-05
08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323 45 5e-05
03_01_0568 - 4192514-4192606,4192694-4192753,4192837-4192932,419... 44 1e-04
01_06_1091 + 34464923-34465026,34465124-34465163,34465245-344653... 40 0.002
05_05_0306 - 23977543-23977614,23977709-23977799,23978296-239783... 39 0.004
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209... 33 0.16
02_05_0884 - 32483735-32483866,32484417-32484491,32484707-324847... 33 0.16
02_05_0057 + 25472872-25472912,25473012-25473157,25474008-254740... 33 0.16
12_02_0464 + 19387078-19387857 31 1.1
03_06_0668 + 35412258-35412527,35412635-35412728,35412853-354129... 30 2.0
05_04_0288 + 19839597-19839821,19841882-19842107,19842494-198425... 29 3.4
02_03_0010 - 13914705-13915318,13915536-13915860,13915907-13916077 29 4.5
11_02_0121 - 8516944-8517387 28 6.0
>11_06_0394 -
23084485-23084577,23084677-23084802,23085134-23085236,
23085895-23085953,23086418-23086519,23086601-23086714,
23087666-23087746,23088073-23088154,23088504-23088556
Length = 270
Score = 70.1 bits (164), Expect = 1e-12
Identities = 52/139 (37%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Frame = +2
Query: 236 LGSTAIGICTSXGVVLAVEKRITSTLMEPHDPSKKIVEVDRHIACAVFG--SDGRLQXP* 409
LGSTAIG+ T GVVLAVEKR+TS L+EP +KI+E+D HI CA+ G +D R
Sbjct: 46 LGSTAIGLKTKDGVVLAVEKRVTSPLLEP-SSVEKIMEIDEHIGCAMSGLIADARTL--- 101
Query: 410 LKRXXLNVRTTGLCTMKRMSVXSCAQGGFHLAIQFWRQ*R*LXEQPCQRXFGVAVMVFRH 589
++ + + + M+V S Q LA++F E+ R FGV++++ H
Sbjct: 102 VEHARVETQNHRFSYGEPMTVESTTQAICDLALRFGEG----DEESMSRPFGVSLLIAGH 157
Query: 590 XXEKXPQLVSYGXPXVQFF 646
E P L Y P F+
Sbjct: 158 -DENGPSLY-YTDPSGTFW 174
Score = 62.5 bits (145), Expect = 3e-10
Identities = 28/29 (96%), Positives = 29/29 (100%)
Frame = +1
Query: 154 SEYDRGVNTFSPEGRLFQVEYAIEAIKLG 240
+EYDRGVNTFSPEGRLFQVEYAIEAIKLG
Sbjct: 19 TEYDRGVNTFSPEGRLFQVEYAIEAIKLG 47
>06_01_0539 + 3869156-3869908
Length = 250
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/52 (42%), Positives = 36/52 (69%)
Frame = +2
Query: 227 LSNLGSTAIGICTSXGVVLAVEKRITSTLMEPHDPSKKIVEVDRHIACAVFG 382
+ N GS A+G+ + GVVL EK++TS L++ ++K+ ++D H+ACAV G
Sbjct: 28 IGNAGS-ALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAG 78
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1
Query: 160 YDRGVNTFSPEGRLFQVEYAIEAI 231
YD FSPEGRL+QVEYA+EAI
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAI 28
>06_01_0529 + 3831100-3831852
Length = 250
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/52 (42%), Positives = 36/52 (69%)
Frame = +2
Query: 227 LSNLGSTAIGICTSXGVVLAVEKRITSTLMEPHDPSKKIVEVDRHIACAVFG 382
+ N GS A+G+ + GVVL EK++TS L++ ++K+ ++D H+ACAV G
Sbjct: 28 IGNAGS-ALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAG 78
Score = 39.5 bits (88), Expect = 0.002
Identities = 17/24 (70%), Positives = 19/24 (79%)
Frame = +1
Query: 160 YDRGVNTFSPEGRLFQVEYAIEAI 231
YD FSPEGRL+QVEYA+EAI
Sbjct: 5 YDSRTTIFSPEGRLYQVEYAMEAI 28
>06_01_0479 + 3419657-3420337
Length = 226
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/52 (42%), Positives = 36/52 (69%)
Frame = +2
Query: 227 LSNLGSTAIGICTSXGVVLAVEKRITSTLMEPHDPSKKIVEVDRHIACAVFG 382
+ N GS A+G+ + GVVL EK++TS L++ ++K+ ++D H+ACAV G
Sbjct: 4 IGNAGS-ALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAG 54
>09_06_0102 + 20870346-20870518,20870599-20871013,20872180-20872341
Length = 249
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 154 SEYDRGVNTFSPEGRLFQVEYAIEAIKLG 240
+ YDR + FSP+G LFQVEYA+EA++ G
Sbjct: 2 ARYDRAITVFSPDGHLFQVEYALEAVRKG 30
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 239 GSTAIGICTSXGVVLAVEKRITSTLMEPHDPSKKIVEVDRHI--ACAVFGSDGRL 397
G+ A+G+ S VVL VEK+ T L + +KI +D HI ACA +D R+
Sbjct: 30 GNAAVGVRGSDTVVLGVEKKSTPKLQDSRS-VRKIASLDTHIALACAGLKADARV 83
>08_02_1495 + 27526008-27526390,27526462-27526876,27529162-27529323
Length = 319
Score = 45.2 bits (102), Expect = 5e-05
Identities = 17/29 (58%), Positives = 23/29 (79%)
Frame = +1
Query: 154 SEYDRGVNTFSPEGRLFQVEYAIEAIKLG 240
+ YDR + FSP+G LFQVEYA+EA++ G
Sbjct: 72 ARYDRAITVFSPDGHLFQVEYALEAVRKG 100
Score = 35.9 bits (79), Expect = 0.030
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = +2
Query: 239 GSTAIGICTSXGVVLAVEKRITSTLMEPHDPSKKIVEVDRHI--ACAVFGSDGRL 397
G+ A+G+ + VVL VEK+ T L + +KI +D HI ACA +D R+
Sbjct: 100 GNAAVGVRGTDTVVLGVEKKSTPKLQDSRS-MRKIASLDTHIALACAGLKADARV 153
>03_01_0568 -
4192514-4192606,4192694-4192753,4192837-4192932,
4193088-4193170,4193289-4193347,4193463-4193559,
4194151-4194232,4194353-4194447,4194585-4194660
Length = 246
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/29 (62%), Positives = 23/29 (79%)
Frame = +1
Query: 148 TRSEYDRGVNTFSPEGRLFQVEYAIEAIK 234
T + YDR + FSPEGRL+QVEYA +A+K
Sbjct: 5 TGAGYDRHITIFSPEGRLYQVEYAFKAVK 33
>01_06_1091 +
34464923-34465026,34465124-34465163,34465245-34465328,
34465457-34465480,34465582-34465655,34465726-34465812,
34465922-34466006,34466215-34466261,34467048-34467113,
34468307-34468397,34468477-34468548
Length = 257
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1
Query: 160 YDRGVNTFSPEGRLFQVEYAIEAI 231
YD V TFSP+GR+FQVEYA +A+
Sbjct: 8 YDLSVTTFSPDGRVFQVEYATKAV 31
Score = 28.3 bits (60), Expect = 6.0
Identities = 12/24 (50%), Positives = 16/24 (66%)
Frame = +2
Query: 245 TAIGICTSXGVVLAVEKRITSTLM 316
T +GI G+VL VEK +TS +M
Sbjct: 36 TVVGIKCKDGIVLGVEKLVTSKMM 59
>05_05_0306 -
23977543-23977614,23977709-23977799,23978296-23978361,
23978399-23978479,23979130-23979176,23979408-23979492,
23979570-23979656,23979728-23979801,23980083-23980166,
23980259-23980298,23980386-23980489
Length = 276
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/24 (66%), Positives = 20/24 (83%)
Frame = +1
Query: 160 YDRGVNTFSPEGRLFQVEYAIEAI 231
YD V TFSP+GR+FQVEYA +A+
Sbjct: 8 YDLSVTTFSPDGRVFQVEYAGKAV 31
Score = 33.5 bits (73), Expect = 0.16
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 245 TAIGICTSXGVVLAVEKRITSTLMEPHDPSKKIVEVDRHIACAVFG--SDGR 394
T +GI G+VL VEK +TS ++ ++++ V RH AV G +DGR
Sbjct: 36 TVVGIKCKDGIVLGVEKLVTSKMI-LKGSNRRLHSVHRHSGLAVAGLAADGR 86
>06_01_0285 -
2090427-2090558,2091045-2091119,2091334-2091407,
2091792-2091903,2092036-2092108,2092291-2092346,
2092679-2092755,2093384-2093525
Length = 246
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 236 LGSTAIGICTSXGVVLAVEKRITSTLMEPHDPSKKIVEVDRHIACAVFGS 385
+G+T +G+C GVVLA + R ++ + + S KI ++ ++ GS
Sbjct: 24 MGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGS 73
>02_05_0884 -
32483735-32483866,32484417-32484491,32484707-32484780,
32485180-32485291,32485476-32485548,32485674-32485729,
32486046-32486122,32486799-32486940
Length = 246
Score = 33.5 bits (73), Expect = 0.16
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 236 LGSTAIGICTSXGVVLAVEKRITSTLMEPHDPSKKIVEVDRHIACAVFGS 385
+G+T +G+C GVVLA + R ++ + + S KI ++ ++ GS
Sbjct: 24 MGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYICRSGS 73
>02_05_0057 +
25472872-25472912,25473012-25473157,25474008-25474072,
25474182-25474228,25474922-25474997,25475176-25475243,
25475862-25475931,25476178-25476263,25476418-25476480,
25476556-25476621,25476740-25476788
Length = 258
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/29 (44%), Positives = 20/29 (68%)
Frame = +1
Query: 154 SEYDRGVNTFSPEGRLFQVEYAIEAIKLG 240
S+Y + TFSP G+L Q+E+A+ A+ G
Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSG 32
>12_02_0464 + 19387078-19387857
Length = 259
Score = 30.7 bits (66), Expect = 1.1
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -3
Query: 366 AMCRSTSTIFFDG-SWGSIKVEVILFSTAKTTPSEVQMPIAVEPKFDSFYGIF-HLEQPS 193
A RS + I + SW + ++ +L + E ++ +A+ SF +F HLE
Sbjct: 154 AAARSPAVITEESRSWAAAELAALLPRLRQAQERETEVEMAMARMMPSFLVMFWHLEIAK 213
Query: 192 FRAECVDAAI 163
RAE DAA+
Sbjct: 214 ARAEAADAAL 223
>03_06_0668 +
35412258-35412527,35412635-35412728,35412853-35412968,
35414877-35414921,35415471-35415680
Length = 244
Score = 29.9 bits (64), Expect = 2.0
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +2
Query: 137 KCFSHVPSMIAASTHSALKEGC 202
KCF HV S+I+ S ++ + +GC
Sbjct: 198 KCFDHVTSLISVSPNTKMPQGC 219
>05_04_0288 +
19839597-19839821,19841882-19842107,19842494-19842582,
19845184-19845387,19845463-19845717,19845796-19846011,
19846611-19846766,19846880-19847039,19847702-19847788,
19847789-19847940,19848006-19848143,19848714-19848788,
19849166-19849444
Length = 753
Score = 29.1 bits (62), Expect = 3.4
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 137 KCFSHVPSMIAASTHSALKEGC 202
KCF HV S+I+ S + + +GC
Sbjct: 428 KCFDHVTSLISVSPSTKMPQGC 449
>02_03_0010 - 13914705-13915318,13915536-13915860,13915907-13916077
Length = 369
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +2
Query: 260 CTSXGVVLAVEKRITSTLMEPHD--PSKKIVEVDRHIACAVFGSDG 391
C + +LA + + ++ HD P + +D H+ C V+GS G
Sbjct: 79 CLALTEMLAAKLDLLMKRLDDHDKRPQGTVKALDSHVMCEVYGSTG 124
>11_02_0121 - 8516944-8517387
Length = 147
Score = 28.3 bits (60), Expect = 6.0
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = +2
Query: 167 AASTHSA-LKEGCSKWNMP*KLSNLGSTAIGICTSXGVVLAVEKRITSTLMEPHDPSKKI 343
AAST S + GC N + GSTA+G+ T+ G + + R+ + +K
Sbjct: 34 AASTRSGGVAAGCGDGNGDGR-GAAGSTAVGMATAAGFLTSHRPRL---VRAAGGAAKDS 89
Query: 344 VEVDRHIACAVFGSDG 391
+ DR I A GS G
Sbjct: 90 CDSDRQIRAASAGSGG 105
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,671,036
Number of Sequences: 37544
Number of extensions: 344030
Number of successful extensions: 776
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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