Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fbpv0847
(715 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein p... 27 0.58
AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific do... 25 1.8
AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific doub... 25 1.8
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 25 1.8
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 25 3.1
AY341206-1|AAR13770.1| 196|Anopheles gambiae SP14D1 protein. 24 5.4
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript... 24 5.4
DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific do... 23 7.2
DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific doub... 23 7.2
M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein. 23 9.5
>AB090813-1|BAC57901.1| 724|Anopheles gambiae gag-like protein
protein.
Length = 724
Score = 27.1 bits (57), Expect = 0.58
Identities = 16/58 (27%), Positives = 27/58 (46%)
Frame = +3
Query: 402 QQQRWQTCLRRWQGQDESKSQLEVRSSVGEQQGLLQIVNTQRNQYLTLSVKTTPTQNH 575
QQQ+ Q ++ Q Q + + Q + +QQ Q + + Q T V+ P+Q H
Sbjct: 190 QQQQQQQQQQQQQQQQQQRQQQQQCQQQRQQQPQQQQLQQPQQQLWTTVVRGRPSQRH 247
>AY903308-1|AAX48940.1| 241|Anopheles gambiae female-specific
doublesex protein protein.
Length = 241
Score = 25.4 bits (53), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 366 QARRSCFDVAR*QQQRWQTCLRRWQGQDESKS 461
Q + C R + QT LRR Q QDE ++
Sbjct: 66 QCEKCCLTAERQRVMALQTALRRAQTQDEQRA 97
>AY903307-1|AAX48939.1| 283|Anopheles gambiae male-specific
doublesex protein protein.
Length = 283
Score = 25.4 bits (53), Expect = 1.8
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = +3
Query: 366 QARRSCFDVAR*QQQRWQTCLRRWQGQDESKS 461
Q + C R + QT LRR Q QDE ++
Sbjct: 66 QCEKCCLTAERQRVMALQTALRRAQTQDEQRA 97
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 25.4 bits (53), Expect = 1.8
Identities = 12/44 (27%), Positives = 20/44 (45%)
Frame = +1
Query: 349 NIKLMYKRDGLALTLRDDSNNDGRLAYGDGKDKTSPKVSWKFVP 480
N+K+ K+ + R ++ ND + G K S K+ W P
Sbjct: 680 NVKIETKKIDIKAAPRIEAKNDAYIPKGGDKKIISTKLQWNAKP 723
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 24.6 bits (51), Expect = 3.1
Identities = 8/23 (34%), Positives = 16/23 (69%)
Frame = +1
Query: 193 QEERSHHKCRKQTHTKQQDELME 261
+EE+ H +C KQ+ T + ++ +E
Sbjct: 483 REEKHHERCAKQSETTRIEKQLE 505
>AY341206-1|AAR13770.1| 196|Anopheles gambiae SP14D1 protein.
Length = 196
Score = 23.8 bits (49), Expect = 5.4
Identities = 9/27 (33%), Positives = 14/27 (51%)
Frame = +2
Query: 620 DLQPAKYDNDVLFFMYNREYNXGLVLS 700
+LQ + ND+ +NRE N +S
Sbjct: 40 NLQDKSHHNDIALIRFNREINYSSTIS 66
>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
protein.
Length = 1209
Score = 23.8 bits (49), Expect = 5.4
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +1
Query: 202 RSHHKCRKQTHTKQQDELMEYAYQLWMQGSKDIVRECFP--VEFTLIFAENNIK-LMYKR 372
R + +C K+ + + E + W++ K RE P +FT +A K + +
Sbjct: 376 RRYAECSKRKEQNRMFNINEREFYNWIRNDKPNFREGLPDIGDFTQFWANLCEKPVQHNS 435
Query: 373 DGLALTLRDDSNNDG 417
+G+ L D+ +DG
Sbjct: 436 EGMRLA-EDERFSDG 449
>DQ137802-1|AAZ78363.1| 265|Anopheles gambiae female-specific
doublesex protein protein.
Length = 265
Score = 23.4 bits (48), Expect = 7.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 375 RSCFDVAR*QQQRWQTCLRRWQGQDESKS 461
+ C R + QT LRR Q QDE ++
Sbjct: 69 KCCLTAERQRVMALQTALRRAQTQDEQRA 97
>DQ137801-1|AAZ78362.1| 622|Anopheles gambiae male-specific
doublesex protein protein.
Length = 622
Score = 23.4 bits (48), Expect = 7.2
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 375 RSCFDVAR*QQQRWQTCLRRWQGQDESKS 461
+ C R + QT LRR Q QDE ++
Sbjct: 69 KCCLTAERQRVMALQTALRRAQTQDEQRA 97
>M93690-1|AAA29364.1| 613|Anopheles gambiae ORF1 protein.
Length = 613
Score = 23.0 bits (47), Expect = 9.5
Identities = 17/62 (27%), Positives = 23/62 (37%)
Frame = +3
Query: 402 QQQRWQTCLRRWQGQDESKSQLEVRSSVGEQQGLLQIVNTQRNQYLTLSVKTTPTQNHMA 581
QQQR Q ++ Q Q + + Q + EQQ L V +R P Q
Sbjct: 276 QQQRVQQQNQQHQRQQQQQQQQRQQQQQQEQQELWTTVVRRRQNTQQQQQSNQPQQQQQQ 335
Query: 582 YG 587
G
Sbjct: 336 TG 337
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 642,766
Number of Sequences: 2352
Number of extensions: 11400
Number of successful extensions: 81
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 73177125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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