Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fbpv0847
         (715 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA...    35   0.096
AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA...    31   2.1  
AB190179-1|BAD44692.1|  841|Drosophila melanogaster transcriptio...    30   2.7  
AY051412-1|AAK92836.1|  555|Drosophila melanogaster GH09241p pro...    29   6.3  
AE014297-2164|AAF55286.3|  555|Drosophila melanogaster CG6126-PA...    29   6.3  
AE014296-3573|AAF51744.3| 2352|Drosophila melanogaster CG7177-PA...    29   6.3  

>AE014296-2342|AAF49773.3| 3146|Drosophila melanogaster CG9007-PA
            protein.
          Length = 3146

 Score = 35.1 bits (77), Expect = 0.096
 Identities = 28/93 (30%), Positives = 41/93 (44%), Gaps = 2/93 (2%)
 Frame = +2

Query: 14   REPDAQKMKTVQVILCLFVASLYANGTSVSDSKLEDDLYNSILVADYDN--AVEKSKQIY 187
            + P  Q+ +  Q +  +  A+  A   S S+SK EDD+  S          A +K KQ  
Sbjct: 1750 KHPQQQQQQQQQPVTPVSAATAPAATPSSSESK-EDDVSASSTTTPTTRTPAKDKPKQSR 1808

Query: 188  EDKKSEVITNVVNKLIRNNKMNSWSTPTSSGCK 286
            ED+K E I   + K+ +        T  SSG K
Sbjct: 1809 EDRKLEAILRAIEKMEKQEARGKKDTRQSSGGK 1841


>AE013599-118|AAF57301.2| 1976|Drosophila melanogaster CG14470-PA
           protein.
          Length = 1976

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = +3

Query: 84  PTEPQSPTPNSKTIFTTASSLPITTMPLKKANRSTRTRRAKSS 212
           P   + P P +    TT +  P +T P KK  + TRT    SS
Sbjct: 298 PPTQEEPVPATTESTTTTTQAPASTTPKKKKRKPTRTPGTGSS 340


>AB190179-1|BAD44692.1|  841|Drosophila melanogaster transcription
           factor dRFX2 protein.
          Length = 841

 Score = 30.3 bits (65), Expect = 2.7
 Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 2/58 (3%)
 Frame = +2

Query: 44  VQVILCLFVASLYANGTS--VSDSKLEDDLYNSILVADYDNAVEKSKQIYEDKKSEVI 211
           ++VI  +     +++G+S  +S+   +D  YN     D++N +E+S  I ++KK ++I
Sbjct: 666 IRVITAIRKVIFFSSGSSKLLSNFSNKDVFYNEWHSLDFENIIEESFLIPDEKKPQII 723


>AY051412-1|AAK92836.1|  555|Drosophila melanogaster GH09241p
           protein.
          Length = 555

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 32  KMKTVQVILCLFVASLYANGTSVSDSKLEDDLY 130
           +MKT+ V LC F  SL   G S+S  KL  + Y
Sbjct: 333 RMKTLNVCLCWFANSLVYYGLSLSAGKLYGNPY 365


>AE014297-2164|AAF55286.3|  555|Drosophila melanogaster CG6126-PA
           protein.
          Length = 555

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 15/33 (45%), Positives = 19/33 (57%)
 Frame = +2

Query: 32  KMKTVQVILCLFVASLYANGTSVSDSKLEDDLY 130
           +MKT+ V LC F  SL   G S+S  KL  + Y
Sbjct: 333 RMKTLNVCLCWFANSLVYYGLSLSAGKLYGNPY 365


>AE014296-3573|AAF51744.3| 2352|Drosophila melanogaster CG7177-PA
            protein.
          Length = 2352

 Score = 29.1 bits (62), Expect = 6.3
 Identities = 18/58 (31%), Positives = 29/58 (50%)
 Frame = +3

Query: 402  QQQRWQTCLRRWQGQDESKSQLEVRSSVGEQQGLLQIVNTQRNQYLTLSVKTTPTQNH 575
            QQQ  Q  L++ Q Q   + QL+ +  + +QQ  LQ    Q+ Q++    +  P Q H
Sbjct: 1059 QQQLAQHQLQQLQQQQLQQQQLQQQQQIQQQQ--LQQQQLQQQQFVQQYAQAMPQQQH 1114


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,372,652
Number of Sequences: 53049
Number of extensions: 546347
Number of successful extensions: 2206
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2083
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2196
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3170136354
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)